Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 0.0e+00 1208.0 626 100.0
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 7.3e-137 491.9 703 48.4
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 9.0e-135 485.0 651 49.3
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 2.6e-134 483.4 701 47.5
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 3.4e-134 483.0 703 48.2
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 8.4e-133 478.4 698 47.0
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 5.5e-124 449.1 702 46.9
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.6e-120 437.6 693 46.5
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 4.8e-120 436.0 660 45.2
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 6.5e-117 425.6 698 45.1
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 3.5e-115 419.9 630 47.6
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 7.9e-115 418.7 682 44.6
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 4.3e-113 412.9 660 44.7
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 2.6e-110 403.7 668 43.7
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 5.9e-110 402.5 684 44.0
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.7e-107 393.7 658 43.2
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.7e-107 393.7 658 43.2
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 3.6e-107 393.3 648 44.4
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 6.1e-107 392.5 657 43.7
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 5.7e-105 386.0 654 43.6
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 8.2e-104 382.1 731 41.6
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 4.1e-103 379.8 697 42.3
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 9.1e-103 378.6 683 41.4
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 4.5e-102 376.3 691 41.4
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 7.7e-102 375.6 631 43.6
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 5.0e-101 372.9 669 42.6
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 5.0e-101 372.9 680 42.2
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 2.5e-100 370.5 638 42.9
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 3.6e-99 366.7 666 42.3
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.4e-98 364.8 653 43.2
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 1.1e-97 361.7 657 43.4
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 2.6e-97 360.5 656 42.2
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 2.4e-95 354.0 652 41.9
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 1.2e-94 351.7 650 41.8
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 1.0e-93 348.6 630 41.6
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 1.7e-93 347.8 662 40.9
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 6.5e-93 345.9 645 41.4
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 2.1e-91 340.9 642 40.3
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 3.9e-90 336.7 653 41.5
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 5.2e-90 336.3 638 39.7
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 1.5e-89 334.7 663 40.3
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 4.8e-88 329.7 668 38.8
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 8.2e-88 328.9 650 40.8
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.8e-87 327.8 609 42.0
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.1e-87 327.0 584 41.4
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 4.5e-86 323.2 615 40.7
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 6.5e-85 319.3 628 38.5
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 3.2e-84 317.0 674 39.2
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 5.5e-84 316.2 654 39.6
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 5.5e-84 316.2 642 39.1
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 3.0e-82 310.5 661 37.8
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.3e-80 305.1 694 38.5
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 1.1e-79 302.0 654 39.0
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 3.1e-79 300.4 629 38.8
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.7e-78 297.4 656 37.8
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 5.9e-78 296.2 650 36.8
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 6.5e-77 292.7 448 45.8
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 6.1e-75 286.2 463 42.5
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 7.5e-73 279.3 567 41.6
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 2.4e-71 274.2 654 35.5
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.1e-71 273.9 588 37.6
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.2e-70 271.9 620 37.6
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 4.5e-70 270.0 582 37.6
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.5e-68 265.0 669 35.7
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 5.5e-68 263.1 392 48.7
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 2.1e-67 261.2 677 36.8
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 3.6e-67 260.4 455 42.0
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 4.7e-67 260.0 641 36.0
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.8e-66 258.1 659 36.6
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 4.0e-66 256.9 660 36.1
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 1.5e-65 255.0 658 37.4
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 5.7e-65 253.1 658 37.1
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 3.7e-64 250.4 669 34.2
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 1.6e-62 245.0 493 37.7
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 3.5e-62 243.8 642 34.6
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 1.7e-61 241.5 640 35.3
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 8.6e-61 239.2 640 35.0
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.8e-58 231.5 466 39.5
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 5.2e-58 229.9 665 34.9
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 2.0e-57 228.0 721 32.0
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 9.8e-57 225.7 639 33.3
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 1.3e-56 225.3 451 36.8
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 4.1e-55 220.3 602 35.0
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 9.2e-55 219.2 644 34.5
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 2.0e-54 218.0 598 34.6
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 6.2e-51 206.5 864 30.3
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 5.4e-47 193.4 689 30.6
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.0e-46 191.4 280 42.5
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 2.0e-46 191.4 658 32.5
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 8.6e-45 186.0 591 33.3
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 5.8e-41 173.3 622 33.4
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 4.9e-40 170.2 626 33.9
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 3.2e-39 167.5 630 32.9
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 3.5e-38 164.1 493 32.0
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 1.7e-37 161.8 549 32.6
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 2.1e-30 138.3 590 29.5
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 1.2e-27 129.0 675 27.9
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 1.6e-27 128.6 538 27.5
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 1.8e-26 125.2 546 29.9
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 3.1e-26 124.4 671 27.0
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 6.9e-26 123.2 652 27.6
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 1.5e-25 122.1 673 26.6
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 4.3e-20 104.0 927 24.5
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 6.2e-19 100.1 479 29.6
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 8.1e-19 99.8 392 27.8
Actinidia39246 Actinidia chinensis HOM05D007315 ORTHO05D008940 7.1e-15 86.7 308 29.9
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 1.8e-10 72.0 126 38.9
Zm00001eb317370 Zea mays HOM05D019859 ORTHO05D008940 9.9e-09 66.2 107 37.4
Zm00001eb442140 Zea mays HOM05D019859 ORTHO05D008940 9.9e-09 66.2 107 37.4
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 1.1e-07 62.8 367 29.4


User provided reference genes

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