Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 2.5e-71 271.9 133 100.0
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.3e-62 243.0 133 88.0
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 1.1e-61 240.0 133 88.0
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.4e-61 238.8 133 86.5
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 6.9e-61 237.3 133 84.2
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 83.5
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 83.5
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 83.5
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 86.5
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 86.5
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 85.7
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 3.4e-60 235.0 133 85.7
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 4.5e-60 234.6 130 86.9
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 5.9e-60 234.2 133 82.0
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 1.0e-59 233.4 130 86.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.0e-59 233.4 133 84.2
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.7e-59 232.6 129 85.3
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.7e-59 232.6 132 85.6
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 5.0e-59 231.1 130 85.4
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 82.7
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 83.5
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 82.0
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 4.2e-58 228.0 133 82.7
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 5.5e-58 227.6 133 78.9
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 7.2e-58 227.3 133 80.5
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 9.4e-58 226.9 127 83.5
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 82.7
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.2e-57 226.5 134 85.1
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 3.6e-57 224.9 133 82.0
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 3.6e-57 224.9 133 81.2
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 6.1e-57 224.2 133 79.7
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 79.7
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 79.7
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 78.9
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 3.0e-56 221.9 133 78.9
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 3.9e-56 221.5 133 79.7
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 80.5
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 78.9
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 8.8e-56 220.3 140 78.6
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 79.7
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 2.0e-55 219.2 133 78.2
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 78.2
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 2.2e-54 215.7 133 76.7
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 3.7e-54 214.9 130 77.7
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 75.9
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 74.4
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 6.9e-53 210.7 113 89.4
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 9.1e-53 210.3 133 74.4
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 1.2e-52 209.9 139 76.3
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 2.6e-52 208.8 128 75.8
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 3.8e-51 204.9 133 74.4
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 2.5e-50 202.2 176 59.1
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 4.2e-50 201.4 116 82.8
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 7.2e-50 200.7 181 60.2
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.7e-49 198.0 114 79.8
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 6.1e-49 197.6 196 58.2
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.4e-48 196.4 131 72.5
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 3.9e-48 194.9 131 71.8
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 6.7e-48 194.1 113 81.4
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 8.8e-48 193.7 133 68.4
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 1.5e-47 193.0 133 69.2
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 2.0e-47 192.6 128 70.3
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.0e-47 192.6 133 68.4
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 3.3e-47 191.8 133 67.7
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 5.7e-47 191.0 133 67.7
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 66.9
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 1.7e-46 189.5 196 53.1
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 4.8e-46 188.0 133 66.2
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 2.4e-45 185.7 133 66.2
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 3.1e-45 185.3 133 66.2
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 3.1e-45 185.3 101 83.2
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 7.7e-44 180.6 128 67.2
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 9.4e-42 173.7 105 78.1
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.6e-41 172.9 105 76.2
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 2.1e-41 172.6 127 61.4
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 2.7e-41 172.2 137 62.0
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.8e-40 169.5 97 80.4
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 2.3e-40 169.1 98 82.7
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 3.0e-40 168.7 103 74.8
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 6.7e-40 167.5 105 76.2
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 2.0e-39 166.0 126 58.7
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 5.7e-39 164.5 98 76.5
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 1.7e-38 162.9 126 61.1
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 4.8e-38 161.4 105 70.5
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 2.4e-37 159.1 92 79.3
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 7.2e-34 147.5 133 63.2
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 2.3e-32 142.5 133 59.4
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 5.7e-31 137.9 129 49.6
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 1.4e-29 133.3 110 52.7
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 9.4e-26 120.6 70 84.3
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.4e-24 116.7 111 50.5
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 6.3e-22 107.8 102 51.0
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.4e-21 106.7 61 82.0
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 4.5e-20 101.7 111 46.8
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 5.9e-20 101.3 109 46.8
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.3e-19 100.1 67 67.2
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 1.2e-17 93.6 141 36.2
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 5.4e-13 78.2 68 58.8
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 3.3e-10 68.9 89 42.7
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 4.3e-10 68.6 47 59.6
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 2.1e-09 66.2 73 42.5
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 3.4e-07 58.9 35 77.1
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 9.8e-07 57.4 34 61.8
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 1.3e-06 57.0 36 63.9


User provided reference genes

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