Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.6e-88 329.3 158 100.0
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 4.8e-53 211.5 104 94.2
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 5.2e-47 191.4 101 88.1
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 2.3e-26 122.9 101 58.4
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 4.3e-25 118.6 105 61.0
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 3.6e-24 115.5 104 58.7
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 2.3e-23 112.8 104 55.8
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 2.3e-23 112.8 103 53.4
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 5.2e-23 111.7 101 54.5
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 4.4e-22 108.6 106 52.8
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 4.4e-22 108.6 99 56.6
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 4.4e-22 108.6 99 56.6
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 5.8e-22 108.2 100 59.0
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 7.5e-22 107.8 109 54.1
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 3.7e-21 105.5 97 52.6
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 1.4e-20 103.6 101 50.5
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 4.1e-20 102.1 105 52.4
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 5.4e-20 101.7 109 49.5
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 5.4e-20 101.7 98 51.0
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 7.0e-20 101.3 109 46.8
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 9.2e-20 100.9 108 46.3
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 1.2e-19 100.5 101 55.4
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 2.0e-19 99.8 109 46.8
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 3.5e-19 99.0 109 45.0
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 3.5e-19 99.0 112 49.1
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 6.0e-19 98.2 99 51.5
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 7.8e-19 97.8 106 50.0
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 1.0e-18 97.4 106 49.1
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 1.0e-18 97.4 106 49.1
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 1.0e-18 97.4 105 53.3
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 1.3e-18 97.1 109 47.7
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 1.3e-18 97.1 110 47.3
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 1.7e-18 96.7 114 45.6
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 1.7e-18 96.7 101 50.5
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 1.7e-18 96.7 106 47.2
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 1.7e-18 96.7 94 55.3
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 2.3e-18 96.3 106 49.1
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 2.3e-18 96.3 106 49.1
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 3.9e-18 95.5 106 48.1
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 3.9e-18 95.5 97 52.6
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 3.9e-18 95.5 107 51.4
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 5.0e-18 95.1 106 48.1
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 6.6e-18 94.7 106 51.9
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 6.6e-18 94.7 110 50.9
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 8.6e-18 94.4 105 47.6
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 8.6e-18 94.4 105 47.6
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 8.6e-18 94.4 101 48.5
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 8.6e-18 94.4 101 45.5
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 8.6e-18 94.4 103 50.5
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 1.1e-17 94.0 99 47.5
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 1.1e-17 94.0 105 48.6
BcaC09g48920 Brassica carinata HOM05D006153 ORTHO05D007701 1.5e-17 93.6 106 47.2
C01p44580 Brassica napus HOM05D006153 ORTHO05D007701 1.5e-17 93.6 106 47.2
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 1.9e-17 93.2 100 51.0
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.5e-17 92.8 110 52.7
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 2.5e-17 92.8 98 46.9
BolC1t04422H Brassica oleracea HOM05D006153 ORTHO05D007701 5.6e-17 91.7 106 46.2
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 7.3e-17 91.3 108 45.4
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 1.6e-16 90.1 110 50.9
FAN15G1936 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.6e-16 90.1 110 52.7
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.6e-16 90.1 110 50.9
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 1.6e-16 90.1 79 53.2
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 1.6e-16 90.1 109 49.5
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 1.6e-16 90.1 99 47.5
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 1.6e-16 90.1 103 47.6
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 2.1e-16 89.7 107 41.1
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 2.8e-16 89.4 62 62.9
Ciclev10029838m.g Citrus clementina HOM05D006153 ORTHO05D007701 3.6e-16 89.0 112 43.8
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 3.6e-16 89.0 96 46.9
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 3.6e-16 89.0 122 47.5
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 3.6e-16 89.0 101 46.5
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 4.7e-16 88.6 49 69.4
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 6.2e-16 88.2 100 47.0
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 6.2e-16 88.2 78 53.8
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 8.1e-16 87.8 97 47.4
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 8.1e-16 87.8 120 46.7
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 8.1e-16 87.8 50 70.0
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 8.1e-16 87.8 53 67.9
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 1.4e-15 87.0 107 43.0
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 1.8e-15 86.7 89 48.3
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 1.8e-15 86.7 102 46.1
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 2.3e-15 86.3 70 55.7
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 3.1e-15 85.9 50 68.0
Thhalv10021904m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 5.2e-15 85.1 75 49.3
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 5.2e-15 85.1 102 48.0
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 6.8e-15 84.7 65 53.8
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 1.5e-14 83.6 48 68.8
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 1.5e-14 83.6 48 68.8
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 2.0e-14 83.2 50 72.0
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 2.0e-14 83.2 51 68.6
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 2.6e-14 82.8 160 36.9
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 3.4e-14 82.4 53 67.9
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 3.4e-14 82.4 82 47.6
Cfa004655 Carpinus fangiana HOM05D006153 ORTHO05D007701 7.5e-14 81.3 85 52.9
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 7.5e-14 81.3 66 54.5
Gohir.A13G045400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 1.7e-13 80.1 81 56.8
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 2.2e-13 79.7 66 53.0
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 2.2e-13 79.7 115 41.7
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 2.2e-13 79.7 56 58.9
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 3.7e-13 79.0 52 59.6
DCAR_001674 Daucus carota HOM05D006153 ORTHO05D007701 1.1e-12 77.4 53 60.4
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 1.1e-12 77.4 90 42.2
DCAR_003609 Daucus carota HOM05D006153 ORTHO05D007701 2.4e-12 76.3 62 56.5
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 4.1e-12 75.5 102 44.1
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 4.1e-12 75.5 63 46.0
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 7.1e-12 74.7 56 53.6
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 9.2e-12 74.3 42 69.0
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 1.2e-11 73.9 61 52.5
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 1.6e-11 73.6 39 69.2
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 4.6e-11 72.0 51 56.9
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 4.6e-11 72.0 51 54.9
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 4.6e-11 72.0 42 64.3
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 1.0e-10 70.9 108 37.0
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 1.0e-10 70.9 58 53.4
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 1.3e-10 70.5 49 59.2
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 3.0e-10 69.3 39 66.7
HanXRQChr16g0514901 Helianthus annuus HOM05D006153 ORTHO05D007701 6.6e-10 68.2 39 66.7
Medtr5g005180 Medicago truncatula HOM05D006153 ORTHO05D007701 1.1e-09 67.4 39 69.2
Zm00001eb264740 Zea mays HOM05D006153 ORTHO05D007701 1.5e-09 67.0 58 51.7
ECA234G4313 Erigeron canadensis HOM05D006153 ORTHO05D007701 2.5e-09 66.2 41 61.0
Ca_24350_v3 Cicer arietinum L. HOM05D006153 ORTHO05D007701 5.6e-09 65.1 62 48.4
HanXRQChr13g0425861 Helianthus annuus HOM05D006153 ORTHO05D007701 9.5e-09 64.3 39 61.5
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 2.8e-08 62.8 67 44.8
Psat4g228040 Pisum sativum HOM05D006153 ORTHO05D007701 2.8e-08 62.8 97 43.3
ECA234G3366 Erigeron canadensis HOM05D006153 ORTHO05D007701 3.6e-08 62.4 41 61.0
TPR.G8325 Trifolium pratense HOM05D006153 ORTHO05D007701 6.2e-08 61.6 97 39.2
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 8.1e-08 61.2 50 50.0
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 1.8e-07 60.1 45 53.3
Eucgr.G01281 Eucalyptus grandis HOM05D006153 ORTHO05D007701 6.8e-07 58.2 64 40.6
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 1.2e-06 57.4 93 37.6
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 1.5e-06 57.0 45 48.9


User provided reference genes

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