Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 3.2e-182 641.7 345 100.0
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 9.1e-97 357.8 353 61.2
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.4e-84 317.4 353 57.2
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 2.3e-84 316.6 355 56.9
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 3.7e-82 309.3 361 54.3
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.6e-80 303.9 353 56.7
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 4.5e-80 302.4 351 53.8
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.3e-79 300.8 355 53.0
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.7e-79 300.4 360 55.6
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.7e-79 300.4 360 55.3
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 3.3e-78 296.2 360 54.7
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 2.1e-77 293.5 356 55.3
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 3.0e-76 289.7 356 55.3
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 7.5e-75 285.0 350 53.7
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 6.4e-74 282.0 364 53.0
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 6.4e-74 282.0 367 51.0
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.8e-73 280.4 356 52.2
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.6e-72 277.3 351 52.7
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 1.3e-71 274.2 354 52.5
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 8.6e-71 271.6 333 53.8
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 3.3e-70 269.6 355 52.1
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 7.3e-70 268.5 332 54.8
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 2.8e-69 266.5 357 50.7
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 1.1e-68 264.6 332 54.2
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 3.1e-68 263.1 360 48.6
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 5.8e-67 258.8 354 50.3
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 5.8e-67 258.8 357 51.0
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.7e-66 257.3 355 50.1
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 9.2e-65 251.5 364 47.5
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 1.6e-64 250.8 326 51.5
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 2.0e-64 250.4 363 46.6
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 2.7e-64 250.0 364 47.8
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 1.3e-63 247.7 357 47.1
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.3e-63 246.9 350 50.0
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.6e-63 245.4 348 48.9
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.2e-61 241.1 357 46.2
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 4.7e-61 239.2 356 46.3
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 6.2e-61 238.8 356 46.3
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 6.2e-61 238.8 353 47.9
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.0e-60 236.1 347 48.4
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 8.9e-60 235.0 357 47.3
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.4e-59 233.0 350 48.0
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.4e-59 233.0 350 48.0
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 4.1e-57 226.1 362 44.5
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 9.2e-57 224.9 386 45.6
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 6.0e-56 222.2 354 44.4
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 1.9e-54 217.2 389 42.2
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 2.4e-52 210.3 351 45.9
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.4e-52 210.3 346 46.2
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 5.8e-51 205.7 354 44.6
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 7.6e-51 205.3 337 43.3
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 9.9e-51 204.9 413 40.9
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 1.3e-50 204.5 361 42.9
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.7e-50 204.1 268 50.0
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.2e-50 203.8 353 43.3
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 4.9e-50 202.6 335 42.7
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 4.9e-50 202.6 416 40.6
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 7.1e-49 198.7 309 44.7
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 7.1e-49 198.7 358 43.0
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.7e-45 186.0 340 42.6
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.8e-44 184.1 337 43.3
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.4e-44 183.7 306 41.2
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 8.4e-42 175.3 340 42.1
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 1.1e-41 174.9 337 39.5
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 4.2e-41 172.9 362 37.3
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 4.6e-40 169.5 348 41.1
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.7e-39 167.5 353 40.8
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 1.1e-38 164.9 354 40.7
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 3.3e-38 163.3 344 38.1
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 1.1e-36 158.3 272 43.0
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.9e-34 150.2 352 42.0
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 3.8e-34 149.8 347 39.8
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 3.8e-34 149.8 368 38.0
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.8e-34 149.8 344 36.0
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 6.4e-34 149.1 371 38.3
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.4e-33 147.9 353 37.4
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 2.4e-33 147.1 353 38.5
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 5.4e-33 146.0 335 37.0
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 1.6e-32 144.4 349 35.8
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 2.1e-32 144.1 353 39.4
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 7.9e-32 142.1 344 37.2
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.3e-31 141.4 346 37.3
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 3.9e-31 139.8 321 34.6
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.5e-30 137.9 226 42.5
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 2.5e-30 137.1 326 35.3
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 7.4e-30 135.6 346 36.1
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 9.6e-30 135.2 174 51.7
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 9.6e-30 135.2 357 36.1
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 2.8e-29 133.7 190 47.9
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 3.1e-28 130.2 345 36.2
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.2e-27 128.3 350 35.7
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 1.5e-27 127.9 353 36.0
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 2.0e-27 127.5 301 36.5
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 4.5e-27 126.3 190 45.8
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.3e-26 124.8 345 35.9
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 1.7e-26 124.4 365 37.5
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 2.9e-26 123.6 325 36.9
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 2.9e-26 123.6 311 35.4
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 6.4e-26 122.5 152 52.0
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 8.4e-26 122.1 347 35.7
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.1e-25 121.7 347 34.9
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 1.1e-25 121.7 347 35.4
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 1.1e-25 121.7 351 34.2
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 4.2e-25 119.8 366 36.3
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 7.9e-24 115.5 355 36.1
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 3.3e-22 110.2 259 37.5
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 2.1e-21 107.5 213 36.2
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 6.2e-21 105.9 269 33.8
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 8.2e-21 105.5 351 33.0
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 4.0e-20 103.2 340 34.1
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.0e-19 100.9 184 42.4
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 2.9e-18 97.1 72 72.2
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 3.2e-17 93.6 333 33.3
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 1.2e-16 91.7 120 54.2
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.6e-16 91.3 346 33.8
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.6e-16 91.3 325 31.1
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.1e-16 90.9 343 30.9
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 6.3e-13 79.3 347 33.7
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 1.4e-12 78.2 101 53.5
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 1.8e-12 77.8 205 35.6
MBI19_g46225_MAGBIO Magnolia biondii HOM05D006273 ORTHO05D015157 1.2e-11 75.1 84 56.0
Actinidia27988 Actinidia chinensis HOM05D006273 ORTHO05D007607 1.7e-10 71.2 49 79.6
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 4.2e-09 66.6 126 42.9
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 7.2e-09 65.9 286 29.0
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 3.6e-08 63.5 259 32.0
C01p44480 Brassica napus HOM05D006273 ORTHO05D007607 5.7e-06 56.2 47 66.0


User provided reference genes

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