Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.7e-299 1031.9 537 100.0
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 9.8e-231 803.5 543 77.9
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.2e-230 802.4 542 77.5
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 2.7e-228 795.4 528 79.9
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 5.5e-226 787.7 540 76.3
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 8.9e-224 780.4 496 80.4
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 2.9e-222 775.4 547 74.6
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.1e-221 773.5 548 74.1
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 1.8e-221 772.7 535 75.9
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 2.3e-219 765.8 548 73.5
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 5.0e-219 764.6 543 73.5
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 6.6e-219 764.2 459 82.6
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 2.5e-218 762.3 503 76.7
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.3e-218 761.9 540 73.9
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 3.6e-217 758.4 527 74.2
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 1.4e-216 756.5 543 73.1
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 1.8e-216 756.1 535 74.0
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 7.5e-215 750.7 526 73.4
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 2.2e-214 749.2 469 78.3
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 5.4e-213 744.6 524 73.3
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 9.2e-213 743.8 545 73.0
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 7.8e-212 740.7 470 78.7
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 1.3e-211 740.0 532 72.4
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 5.0e-211 738.0 538 71.7
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 5.0e-211 738.0 491 76.0
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.9e-210 736.1 541 71.5
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 2.5e-210 735.7 541 69.9
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 2.5e-210 735.7 545 72.3
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 4.3e-210 734.9 535 70.1
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 4.3e-210 734.9 538 71.4
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 9.5e-210 733.8 518 73.4
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 2.8e-209 732.3 543 71.8
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 3.6e-209 731.9 466 78.1
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.7e-209 731.5 537 70.6
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.1e-208 730.3 519 71.9
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 5.2e-208 728.0 530 70.0
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 6.8e-208 727.6 538 70.1
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 6.8e-208 727.6 539 70.7
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 8.9e-208 727.2 523 71.1
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 2.0e-207 726.1 537 71.1
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 4.4e-207 724.9 511 72.2
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.3e-206 723.4 537 71.5
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 3.7e-206 721.8 480 76.5
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 4.9e-206 721.5 464 75.9
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 6.4e-206 721.1 535 69.5
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 8.3e-206 720.7 536 70.0
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 1.1e-205 720.3 524 71.2
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 2.4e-205 719.2 569 68.9
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 2.4e-205 719.2 470 75.7
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.6e-204 716.5 536 70.1
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.6e-204 716.5 478 74.7
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 2.1e-204 716.1 464 75.0
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 1.3e-203 713.4 464 74.6
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 8.6e-203 710.7 536 68.8
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 2.5e-202 709.1 499 71.3
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.2e-201 706.8 459 76.3
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 6.2e-201 704.5 513 70.2
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.8e-200 703.0 520 72.1
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 2.3e-200 702.6 533 66.8
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 1.2e-199 700.3 443 77.7
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 1.3e-198 696.8 523 66.5
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.4e-197 693.3 541 67.3
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 2.4e-197 692.6 513 70.2
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 3.9e-195 685.3 440 75.7
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.1e-194 683.7 555 66.8
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 4.3e-194 681.8 526 68.8
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 9.6e-194 680.6 499 67.3
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 6.2e-193 677.9 472 70.1
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 1.4e-192 676.8 470 71.9
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 4.0e-192 675.2 472 70.1
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 5.2e-192 674.9 527 66.0
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 2.0e-191 672.9 545 65.7
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 2.6e-191 672.5 470 68.9
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 3.4e-191 672.2 507 66.1
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 5.8e-191 671.4 470 69.8
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 7.6e-191 671.0 545 65.5
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 8.4e-190 667.5 499 67.5
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 2.4e-189 666.0 546 65.0
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 9.3e-189 664.1 459 72.3
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 2.1e-188 662.9 526 64.1
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 6.0e-188 661.4 483 67.1
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 7.8e-188 661.0 534 62.4
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 1.3e-187 660.2 537 63.9
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.3e-187 659.4 537 65.7
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 5.1e-187 658.3 472 68.0
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.3e-179 633.6 511 63.4
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 4.8e-177 625.2 446 67.7
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 5.3e-176 621.7 446 67.5
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 6.9e-176 621.3 443 68.4
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 9.9e-175 617.5 543 61.1
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 2.2e-174 616.3 542 62.9
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 2.0e-167 593.2 471 63.3
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 3.4e-167 592.4 509 61.3
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.3e-163 580.5 453 62.9
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 1.6e-156 557.0 488 60.9
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.0e-155 552.7 373 76.1
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 2.5e-154 549.7 540 58.3
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.6e-153 547.0 470 63.6
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 3.8e-142 509.2 382 64.4
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.2e-141 505.8 410 62.7
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 9.4e-141 504.6 526 50.6
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.1e-136 491.1 373 67.3
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.1e-130 471.1 451 51.4
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 3.3e-130 469.5 483 49.1
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 3.7e-129 466.1 452 50.2
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 4.7e-124 449.1 462 48.5
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.7e-121 439.5 375 63.2
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 2.7e-119 433.3 471 47.3
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 5.4e-112 409.1 439 45.8
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 5.2e-75 286.2 476 34.7
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 6.4e-65 252.7 424 33.3
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 1.7e-57 228.0 134 81.3
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.2e-55 221.9 383 41.0
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 2.0e-50 204.5 136 71.3
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 5.7e-45 186.4 137 67.9
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 2.9e-41 174.1 266 42.5
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.4e-40 171.8 107 80.4
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 2.2e-36 157.9 484 24.8
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 8.8e-30 136.0 92 69.6
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 4.4e-29 133.7 94 74.5
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 1.3e-25 122.1 114 63.2
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 3.6e-23 114.0 67 80.6
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 1.8e-22 111.7 208 37.0
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 4.4e-21 107.1 195 35.4
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 8.2e-20 102.8 220 32.7
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 1.4e-19 102.1 128 50.8
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 8.0e-15 86.3 80 58.8
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 3.1e-11 74.3 408 20.8
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 9.1e-11 72.8 60 56.7
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 3.6e-07 60.8 61 55.7
AUR62005379 Chenopodium quinoa HOM05D000449 ORTHO05D000360 5.2e-06 57.0 90 43.3


User provided reference genes

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