Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 0.0e+00 1303.1 642 100.0
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 1.0e-189 667.5 648 57.4
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 2.0e-185 653.3 653 55.7
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 3.7e-184 649.0 649 55.9
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 3.8e-181 639.0 655 54.4
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 3.0e-178 629.4 649 54.1
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 5.2e-178 628.6 668 53.1
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.1e-177 627.5 657 53.0
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 2.6e-177 626.3 662 53.3
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 8.2e-176 621.3 644 54.2
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 8.2e-176 621.3 649 53.8
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.8e-175 620.2 647 53.8
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 4.1e-175 619.0 660 52.3
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 5.3e-175 618.6 693 51.7
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 7.0e-175 618.2 659 54.0
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 2.0e-174 616.7 669 51.1
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 2.6e-174 616.3 649 53.2
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 4.5e-174 615.5 645 52.4
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 7.7e-174 614.8 641 54.4
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 2.1e-171 606.7 656 51.8
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 1.4e-170 604.0 639 52.6
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 1.8e-170 603.6 652 52.5
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 8.8e-170 601.3 648 52.0
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 7.5e-169 598.2 652 52.3
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.7e-168 597.0 586 56.3
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 4.8e-168 595.5 653 51.9
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 6.3e-168 595.1 646 53.6
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 8.2e-168 594.7 654 52.6
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 5.9e-166 588.6 652 51.5
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 2.2e-165 586.6 641 52.3
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 2.2e-165 586.6 663 51.1
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 2.9e-165 586.3 640 52.8
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.5e-165 585.1 656 51.4
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 8.5e-165 584.7 667 51.1
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 1.1e-164 584.3 643 51.2
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 1.5e-164 583.9 641 51.5
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 1.5e-164 583.9 648 51.2
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 1.9e-164 583.6 666 50.6
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.9e-164 583.6 672 49.4
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 9.4e-164 581.3 656 50.9
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 9.4e-164 581.3 646 51.5
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 1.6e-163 580.5 649 51.6
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 8.0e-163 578.2 648 50.5
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 1.4e-162 577.4 642 50.6
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.4e-162 577.4 659 49.8
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 8.8e-162 574.7 648 50.9
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.5e-161 573.9 662 50.6
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 1.3e-160 570.9 673 48.9
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.2e-160 570.1 665 49.0
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.4e-159 567.4 640 50.6
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.6e-158 563.9 651 49.9
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 1.6e-158 563.9 664 51.2
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 2.7e-158 563.1 645 49.8
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 2.9e-157 559.7 648 49.4
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.5e-156 556.6 647 50.9
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 3.2e-156 556.2 653 48.9
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 9.5e-156 554.7 631 50.1
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 1.2e-155 554.3 653 48.7
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 1.6e-155 553.9 656 50.2
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.8e-155 553.1 647 51.2
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 2.8e-155 553.1 650 48.8
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 3.6e-155 552.7 651 49.2
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 6.1e-155 552.0 689 48.9
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.0e-154 551.2 647 51.2
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 1.4e-154 550.8 653 48.5
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 5.2e-154 548.9 657 49.0
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 6.8e-154 548.5 654 49.4
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 8.8e-154 548.1 647 48.7
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 2.0e-153 547.0 664 48.8
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.0e-153 547.0 697 47.9
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 3.4e-153 546.2 664 49.2
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 4.4e-153 545.8 655 48.9
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 4.4e-153 545.8 658 47.9
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 4.4e-153 545.8 653 48.5
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 4.4e-153 545.8 662 48.2
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 5.7e-153 545.4 656 48.3
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 5.7e-153 545.4 646 48.5
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 7.5e-153 545.0 657 50.7
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 7.5e-153 545.0 656 49.7
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 1.7e-152 543.9 640 48.3
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 1.7e-152 543.9 659 49.2
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 4.9e-152 542.3 660 48.5
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 8.3e-152 541.6 660 48.2
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 2.4e-151 540.0 668 48.8
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.1e-151 539.3 661 49.0
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 4.1e-151 539.3 649 47.5
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 4.1e-151 539.3 663 48.0
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 9.2e-151 538.1 656 48.2
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 9.2e-151 538.1 650 47.7
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 3.5e-150 536.2 656 47.7
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 7.8e-150 535.0 652 48.8
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 1.7e-149 533.9 666 48.9
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 2.3e-149 533.5 656 48.5
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 2.9e-149 533.1 648 47.8
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 6.6e-149 531.9 686 46.6
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 1.5e-148 530.8 652 48.8
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 1.2e-147 527.7 671 47.4
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.2e-147 527.7 664 47.3
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 3.6e-147 526.2 653 48.9
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 3.6e-147 526.2 652 48.0
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 4.7e-147 525.8 652 47.1
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.3e-146 523.5 660 47.9
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 3.0e-146 523.1 651 47.5
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 4.0e-146 522.7 675 46.2
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.8e-146 521.9 650 49.7
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.8e-146 521.9 644 48.3
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.2e-145 521.2 663 47.8
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 2.0e-145 520.4 652 46.8
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 3.2e-143 513.1 660 46.2
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 5.4e-143 512.3 660 45.5
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 7.0e-143 511.9 657 46.3
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 4.6e-142 509.2 488 56.4
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 7.8e-142 508.4 637 47.4
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 8.6e-141 505.0 676 45.1
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 1.1e-140 504.6 657 46.4
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 3.3e-140 503.1 661 46.4
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 2.1e-139 500.4 650 45.4
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 2.8e-139 500.0 649 46.8
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.4e-138 497.7 690 44.5
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 6.8e-138 495.4 492 57.7
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.9e-135 487.3 503 53.7
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 1.1e-130 471.5 597 45.9
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.5e-129 467.6 668 43.0
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 7.8e-126 455.3 690 43.3
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 1.3e-125 454.5 645 43.6
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 2.5e-124 450.3 652 45.9
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.6e-123 447.6 668 41.8
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 3.8e-120 436.4 499 51.1
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 2.5e-116 423.7 630 45.4
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 9.0e-114 415.2 495 50.5
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 7.8e-110 402.1 491 49.1
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 7.8e-110 402.1 495 50.1
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.5e-108 397.9 641 41.7
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 3.9e-101 373.2 624 40.7
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 9.0e-98 362.1 395 50.1
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 4.9e-96 356.3 491 46.0
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.2e-94 351.7 489 45.8
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 2.3e-93 347.4 677 36.9
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.8e-91 340.5 584 39.4
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 5.3e-90 336.3 682 35.9
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.9e-84 317.8 410 46.1
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 2.5e-84 317.4 452 46.0
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.5e-81 306.6 323 53.3
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 4.2e-79 300.1 641 36.0
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.1e-77 293.1 561 36.9
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 2.5e-76 290.8 279 53.8
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 9.1e-74 282.3 306 52.3
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 3.4e-73 280.4 685 31.7
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.3e-69 267.7 340 47.6
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.5e-68 265.0 672 32.0
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 2.0e-68 264.6 337 48.7
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 8.2e-67 259.2 760 30.7
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 4.5e-65 253.4 244 59.0
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 5.0e-64 250.0 311 43.4
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 4.7e-54 216.9 393 38.2
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.2e-46 192.2 200 51.0
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 3.0e-45 187.6 671 29.2
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 5.4e-42 176.8 660 27.1
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 1.0e-40 172.6 143 58.7
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 5.4e-34 150.2 242 42.1
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 2.3e-29 134.8 301 34.2
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.3e-27 129.0 768 23.7
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 2.4e-26 124.8 83 77.1
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 5.0e-24 117.1 91 60.4
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 5.6e-23 113.6 107 53.3
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 6.2e-22 110.2 136 50.0
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 7.0e-18 96.7 114 44.7
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.5e-15 89.0 128 44.5
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 3.3e-15 87.8 90 53.3
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 7.3e-15 86.7 101 50.5
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 3.6e-14 84.3 108 46.3
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 6.2e-14 83.6 61 72.1
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 4.4e-12 77.4 68 55.9
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 2.2e-11 75.1 100 43.0
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 7.8e-09 66.6 63 52.4
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 1.0e-08 66.2 57 52.6
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.5e-07 62.4 51 64.7
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 1.5e-07 62.4 83 43.4
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 7.3e-07 60.1 101 39.6
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 2.8e-06 58.2 45 57.8
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-06 57.0 105 37.1


User provided reference genes

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