Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 4.3e-63 244.6 131 100.0
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 4.3e-23 111.7 119 57.1
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 5.6e-23 111.3 109 57.8
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 6.2e-22 107.8 112 54.5
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 1.1e-21 107.1 113 57.5
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 5.3e-21 104.8 109 56.9
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 9.0e-21 104.0 114 52.6
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 9.0e-21 104.0 114 51.8
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 1.5e-20 103.2 118 51.7
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 1.0e-19 100.5 121 44.6
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 4.9e-19 98.2 113 50.4
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 1.9e-18 96.3 115 52.2
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 2.5e-18 95.9 113 54.0
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 9.3e-18 94.0 116 45.7
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 9.3e-18 94.0 119 49.6
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.6e-17 93.2 119 49.6
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.1e-17 92.8 119 49.6
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 4.6e-17 91.7 114 50.0
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 6.0e-17 91.3 113 50.4
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 6.0e-17 91.3 117 52.1
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.3e-16 90.1 111 52.3
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 1.3e-16 90.1 122 44.3
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 1.3e-16 90.1 116 45.7
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.8e-16 89.7 114 52.6
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.8e-16 89.7 113 49.6
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 3.0e-16 89.0 118 52.5
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 3.9e-16 88.6 112 49.1
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 5.1e-16 88.2 114 51.8
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.7e-16 87.8 108 54.6
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 8.7e-16 87.4 114 51.8
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 1.1e-15 87.0 121 47.1
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 1.5e-15 86.7 113 47.8
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 1.9e-15 86.3 109 48.6
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 1.9e-15 86.3 123 46.3
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 1.9e-15 86.3 114 50.0
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.9e-15 86.3 116 43.1
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 1.9e-15 86.3 119 44.5
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 2.5e-15 85.9 111 50.5
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 5.7e-15 84.7 108 52.8
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 5.7e-15 84.7 109 52.3
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 5.7e-15 84.7 113 46.9
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.6e-14 83.2 113 47.8
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 2.1e-14 82.8 113 47.8
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 6.3e-14 81.3 114 42.1
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 6.3e-14 81.3 116 44.0
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 1.1e-13 80.5 111 49.5
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 1.4e-13 80.1 109 45.9
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 2.4e-13 79.3 113 45.1
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 4.1e-13 78.6 111 43.2
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 4.1e-13 78.6 111 43.2
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 4.1e-13 78.6 111 43.2
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 4.1e-13 78.6 117 44.4
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 5.3e-13 78.2 115 46.1
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 2.0e-12 76.3 125 43.2
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 3.4e-12 75.5 108 42.6
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 3.4e-12 75.5 111 43.2
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 4.5e-12 75.1 116 42.2
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 5.9e-12 74.7 118 41.5
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 5.9e-12 74.7 89 51.7
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 7.6e-12 74.3 110 48.2
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 7.6e-12 74.3 117 43.6
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 1.0e-11 73.9 113 40.7
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.0e-11 73.9 116 40.5
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 2.2e-11 72.8 100 51.0
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 5.0e-11 71.6 120 45.0
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 5.0e-11 71.6 109 42.2
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 6.5e-11 71.2 110 43.6
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 6.5e-11 71.2 113 41.6
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 8.4e-11 70.9 111 42.3
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 1.4e-10 70.1 108 45.4
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.9e-10 69.7 102 48.0
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 1.9e-10 69.7 102 48.0
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 2.5e-10 69.3 117 36.8
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 2.5e-10 69.3 120 43.3
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 4.2e-10 68.6 109 41.3
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 5.5e-10 68.2 114 38.6
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 2.7e-09 65.9 110 39.1
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 3.5e-09 65.5 126 38.1
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 6.7e-08 61.2 106 40.6
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.5e-07 60.1 77 45.5
TPR.G2798 Trifolium pratense HOM05D005193 ORTHO05D006316 1.9e-07 59.7 72 50.0
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 7.4e-07 57.8 108 40.7
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 8.2e-06 54.3 170 30.0
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 8.2e-06 54.3 72 50.0


User provided reference genes

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