Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 1.5e-92 342.8 174 100.0
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 4.3e-71 271.6 184 72.8
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.4e-69 265.8 179 77.7
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 4.1e-69 265.0 179 77.7
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.0e-68 262.7 188 72.9
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.0e-68 262.7 188 72.9
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 1.3e-67 260.0 186 70.4
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 2.2e-67 259.2 183 71.6
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 3.8e-67 258.5 179 73.7
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 8.5e-67 257.3 184 72.8
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 1.1e-66 256.9 184 71.2
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 1.4e-66 256.5 183 71.0
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 3.2e-66 255.4 185 70.3
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 3.2e-66 255.4 179 76.0
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 4.2e-66 255.0 183 70.5
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 9.3e-66 253.8 184 71.7
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 2.1e-65 252.7 180 73.3
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 2.1e-65 252.7 180 73.3
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 3.6e-65 251.9 175 76.0
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 6.1e-65 251.1 179 72.6
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 7.9e-65 250.8 180 72.2
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 1.3e-64 250.0 184 70.7
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 1.8e-64 249.6 185 70.8
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 1.8e-64 249.6 183 69.9
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 3.0e-64 248.8 190 72.1
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 3.3e-63 245.4 184 67.9
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 7.4e-63 244.2 185 68.1
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 9.7e-63 243.8 187 68.4
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 1.3e-62 243.4 184 67.4
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 1.7e-62 243.0 195 65.6
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 8.2e-62 240.7 186 65.6
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 1.4e-61 240.0 186 70.4
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 5.3e-61 238.0 186 64.5
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 5.3e-61 238.0 186 64.5
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 5.3e-61 238.0 184 67.4
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 5.3e-61 238.0 184 67.4
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 5.3e-61 238.0 184 66.3
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 1.2e-60 236.9 187 64.2
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 1.2e-60 236.9 184 66.3
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 1.0e-59 233.8 186 64.5
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 1.0e-59 233.8 186 67.7
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.3e-59 233.4 185 68.1
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 1.3e-59 233.4 230 56.1
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 1.7e-59 233.0 186 63.4
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 3.8e-59 231.9 187 66.3
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 8.5e-59 230.7 175 69.7
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 1.1e-58 230.3 186 65.1
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 1.4e-58 229.9 186 64.0
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 1.4e-58 229.9 186 64.0
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 1.9e-58 229.6 176 68.8
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 1.9e-58 229.6 175 69.1
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 2.5e-58 229.2 175 69.1
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 4.2e-58 228.4 185 65.4
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 7.2e-58 227.6 190 64.7
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 9.4e-58 227.3 186 64.0
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 1.2e-57 226.9 188 63.3
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 1.2e-57 226.9 184 64.1
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 1.6e-57 226.5 186 63.4
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 4.7e-57 224.9 189 61.4
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 1.0e-56 223.8 178 65.7
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 1.4e-56 223.4 188 62.2
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 3.0e-56 222.2 187 60.4
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 3.0e-56 222.2 182 62.6
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 3.9e-56 221.9 200 58.5
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 5.1e-56 221.5 197 58.9
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 6.7e-56 221.1 193 63.2
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 8.8e-56 220.7 166 66.3
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 2.0e-55 219.5 155 71.6
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.3e-55 218.8 202 59.9
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 7.4e-55 217.6 152 73.0
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.3e-54 216.9 137 81.0
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 2.2e-54 216.1 188 61.2
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 8.2e-54 214.2 172 64.0
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 4.1e-53 211.8 183 59.6
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 5.3e-53 211.5 190 63.2
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 2.6e-52 209.1 139 71.9
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 2.6e-52 209.1 187 59.4
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 3.4e-52 208.8 189 60.8
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 5.9e-52 208.0 145 73.1
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 6.5e-51 204.5 225 52.4
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 1.9e-50 203.0 133 75.9
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 4.2e-50 201.8 133 78.2
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 4.2e-50 201.8 182 61.5
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 4.2e-50 201.8 204 57.8
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 4.2e-50 201.8 176 58.5
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 1.2e-49 200.3 132 75.8
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 1.6e-49 199.9 134 72.4
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.8e-48 196.4 134 75.4
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 8.8e-48 194.1 134 74.6
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 2.0e-47 193.0 162 64.2
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 2.6e-47 192.6 175 61.1
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 3.7e-46 188.7 184 56.5
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 4.8e-46 188.3 222 51.4
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 7.0e-45 184.5 188 56.9
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 2.0e-44 183.0 151 60.9
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 3.5e-44 182.2 154 62.3
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 3.2e-42 175.6 135 71.1
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 4.2e-42 175.3 183 54.1
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 1.0e-40 170.6 195 51.8
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 1.7e-38 163.3 103 75.7
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 1.3e-35 153.7 115 67.0
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 5.0e-35 151.8 91 80.2
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 5.2e-32 141.7 171 49.1
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 8.8e-32 141.0 126 65.1
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.6e-31 139.4 122 65.6
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.6e-31 139.4 122 65.6
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 2.4e-29 132.9 199 44.7
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.7e-28 129.4 74 78.4
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.7e-27 126.7 86 70.9
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 2.6e-23 112.8 209 34.9
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 1.7e-22 110.2 111 60.4
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 1.4e-21 107.1 172 38.4
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 7.5e-15 84.7 112 51.8
vmacro02234 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 4.7e-09 65.5 64 57.8
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 2.3e-08 63.2 110 41.8
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 8.9e-08 61.2 66 57.6
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 8.9e-08 61.2 44 59.1


User provided reference genes

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