Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 3.8e-241 837.8 438 100.0
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 1.0e-209 733.4 439 87.7
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 1.2e-207 726.5 439 87.9
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 3.6e-207 724.9 429 88.1
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 5.2e-206 721.1 439 87.0
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 1.3e-204 716.5 429 87.6
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 1.7e-204 716.1 439 86.6
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 5.4e-203 711.1 425 87.1
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.7e-202 708.8 439 85.0
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 7.3e-200 700.7 429 85.3
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 1.2e-199 699.9 429 86.9
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 3.6e-199 698.4 430 85.8
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 1.4e-198 696.4 438 83.8
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 3.4e-197 691.8 438 84.5
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 9.8e-197 690.3 439 82.9
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 1.7e-196 689.5 434 83.4
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.2e-196 689.1 429 84.1
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 5.4e-195 684.5 439 82.5
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 2.7e-194 682.2 433 84.1
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 1.0e-193 680.2 439 82.2
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 3.0e-193 678.7 426 81.5
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 6.6e-193 677.6 439 81.3
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 8.6e-193 677.2 438 82.9
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 1.1e-192 676.8 441 82.5
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 1.9e-192 676.0 438 80.8
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 9.5e-192 673.7 430 81.4
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 1.2e-191 673.3 438 79.5
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 8.1e-191 670.6 456 78.1
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 3.1e-190 668.7 438 81.3
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 7.5e-189 664.1 422 83.9
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 2.2e-188 662.5 422 82.2
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 4.9e-188 661.4 441 78.5
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 6.4e-188 661.0 471 76.4
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 8.3e-188 660.6 429 81.4
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 1.4e-187 659.8 429 83.4
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 1.4e-187 659.8 429 83.4
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 1.4e-187 659.8 438 80.6
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 2.4e-187 659.1 429 83.2
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 2.4e-187 659.1 429 83.2
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 2.4e-187 659.1 429 83.2
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 4.1e-187 658.3 439 79.5
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 4.1e-187 658.3 439 79.5
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 7.1e-187 657.5 427 80.3
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 1.6e-186 656.4 429 82.8
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 2.1e-186 656.0 429 82.5
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 1.3e-185 653.3 429 82.3
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 1.7e-185 652.9 429 82.3
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.7e-185 652.9 439 79.0
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 3.9e-185 651.7 439 78.8
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 1.1e-184 650.2 429 82.1
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 1.5e-184 649.8 441 77.1
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 1.9e-184 649.4 487 73.9
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 1.9e-184 649.4 440 79.8
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 1.9e-184 649.4 434 77.4
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 2.5e-184 649.0 426 79.8
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 5.6e-184 647.9 434 77.4
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.2e-183 646.7 439 78.6
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 4.7e-183 644.8 425 80.7
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 8.1e-183 644.0 429 81.6
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 2.4e-182 642.5 429 81.6
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 3.1e-182 642.1 438 77.4
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 4.0e-182 641.7 439 76.8
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 5.2e-182 641.3 429 81.1
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 5.2e-182 641.3 439 76.5
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 1.2e-181 640.2 434 79.3
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 1.5e-181 639.8 456 75.4
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 1.5e-181 639.8 448 75.9
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 5.8e-181 637.9 437 79.4
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 1.7e-180 636.3 438 76.7
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 2.2e-180 636.0 422 79.4
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 2.9e-180 635.6 448 77.5
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 3.8e-180 635.2 438 77.6
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 4.9e-180 634.8 431 77.7
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 6.4e-180 634.4 441 75.5
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 8.4e-180 634.0 430 77.2
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 1.1e-179 633.6 431 77.3
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 5.4e-179 631.3 439 76.1
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 1.2e-178 630.2 435 76.8
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 4.6e-178 628.2 434 75.6
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 6.0e-178 627.9 386 83.4
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 1.7e-177 626.3 438 76.7
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 3.0e-177 625.5 443 77.4
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 6.6e-177 624.4 415 80.7
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 2.5e-176 622.5 432 75.7
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 3.3e-176 622.1 432 77.8
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 8.1e-175 617.5 415 80.7
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 8.1e-175 617.5 423 78.7
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.4e-174 616.7 439 75.4
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 2.4e-174 615.9 421 79.6
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 2.0e-173 612.8 474 71.1
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 4.4e-173 611.7 438 74.0
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 7.6e-173 610.9 432 74.3
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 1.1e-171 607.1 426 74.6
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 2.3e-169 599.4 438 75.8
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 3.0e-169 599.0 408 77.5
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 9.6e-168 594.0 441 72.3
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 9.6e-168 594.0 437 75.7
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 3.6e-167 592.0 443 75.8
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 3.1e-166 589.0 466 70.0
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 2.0e-165 586.3 522 63.0
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 3.4e-165 585.5 429 71.3
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 1.7e-164 583.2 422 72.5
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.0e-161 573.9 441 73.0
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 3.9e-161 572.0 392 77.3
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 2.1e-159 566.2 522 63.0
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 2.0e-157 559.7 388 80.2
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 1.9e-155 553.1 388 79.4
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 1.3e-153 547.0 501 65.5
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 6.7e-153 544.7 429 70.6
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.1e-151 539.7 429 70.9
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 1.8e-150 536.6 422 68.7
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 1.2e-149 533.9 437 67.5
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 5.8e-149 531.6 377 77.5
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 2.0e-141 506.5 418 66.5
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 5.9e-141 505.0 373 72.7
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 7.4e-136 488.0 396 68.7
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 1.2e-133 480.7 454 58.4
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 1.5e-133 480.3 326 78.5
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 3.4e-133 479.2 414 62.6
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 2.9e-132 476.1 423 62.9
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 8.8e-129 464.5 399 64.9
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 8.2e-127 458.0 336 71.7
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 9.1e-126 454.5 438 61.2
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 3.8e-124 449.1 428 57.5
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 6.5e-124 448.4 435 56.6
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 6.8e-113 411.8 432 53.5
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 8.3e-111 404.8 354 63.6
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 2.3e-73 280.4 224 67.9
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 4.7e-66 256.1 384 38.8
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 1.0e-60 238.4 422 36.3
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 3.8e-39 166.8 209 51.2
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 3.5e-29 133.7 84 78.6
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 2.8e-18 97.4 55 83.6
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.1e-17 95.5 46 95.7
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.1e-17 95.5 46 95.7
Actinidia13832 Actinidia chinensis HOM05D005555 ORTHO05D006923 9.1e-09 65.9 53 69.8
arahy.Tifrunner.gnm1.ann1.C7XXCR Arachis hypogaea HOM05D005555 ORTHO05D082991 7.7e-08 62.8 126 38.1


User provided reference genes

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