Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 9.7e-242 839.7 422 100.0
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 2.6e-101 373.2 462 49.1
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 7.5e-93 345.1 480 45.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 5.4e-91 339.0 476 46.4
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.8e-86 323.9 485 44.1
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 4.4e-85 319.3 533 40.7
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 9.8e-85 318.2 477 43.0
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 8.3e-84 315.1 486 41.6
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 6.6e-81 305.4 472 43.2
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.5e-80 304.3 525 39.6
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 9.5e-80 301.6 519 39.9
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.0e-78 298.1 519 39.7
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 3.0e-78 296.6 508 38.8
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 1.2e-74 284.6 499 41.5
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 2.7e-74 283.5 565 37.5
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.7e-73 280.8 411 44.8
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.3e-73 280.4 471 39.9
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 3.9e-73 279.6 472 40.3
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 6.6e-73 278.9 443 42.4
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 5.6e-72 275.8 491 40.7
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.8e-71 273.5 470 41.5
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 2.8e-71 273.5 479 39.9
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.1e-70 271.6 468 42.3
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 2.3e-70 270.4 533 37.5
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 4.0e-70 269.6 487 39.4
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 2.9e-68 263.5 297 52.9
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 2.9e-68 263.5 527 35.7
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 9.2e-67 258.5 472 39.0
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 6.0e-66 255.8 443 38.1
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 7.8e-66 255.4 360 43.6
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 1.5e-64 251.1 482 39.2
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 3.3e-64 250.0 472 39.8
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 9.5e-64 248.4 465 39.8
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.6e-63 247.7 523 37.9
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.1e-62 245.0 487 36.1
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 1.1e-62 245.0 486 39.7
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 3.1e-62 243.4 522 37.2
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 5.2e-62 242.7 488 39.3
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 1.5e-61 241.1 327 45.0
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.5e-61 241.1 518 36.5
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 7.5e-61 238.8 486 39.7
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 3.2e-59 233.4 475 34.9
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 4.1e-59 233.0 477 37.5
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 3.5e-58 229.9 480 36.2
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 7.8e-58 228.8 507 33.7
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 7.8e-58 228.8 465 37.8
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 7.8e-58 228.8 475 38.1
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.3e-57 228.0 475 37.1
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.3e-57 228.0 415 40.7
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.7e-57 227.6 529 35.2
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 3.0e-57 226.9 364 39.3
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 5.1e-57 226.1 517 35.8
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 8.6e-57 225.3 491 34.8
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 8.6e-57 225.3 550 35.8
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.1e-56 224.9 470 36.4
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 1.5e-56 224.6 561 33.9
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 1.5e-56 224.6 451 36.8
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.9e-56 224.2 511 35.4
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.9e-56 224.2 430 39.3
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 4.3e-56 223.0 509 35.8
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 4.3e-56 223.0 445 38.0
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 6.2e-55 219.2 429 39.2
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.4e-54 218.0 452 35.6
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.8e-54 217.6 474 36.9
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.4e-54 217.2 500 36.4
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 3.1e-54 216.9 366 42.1
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 6.8e-54 215.7 567 33.5
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 2.0e-53 214.2 530 33.2
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.0e-53 214.2 396 38.1
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 2.6e-53 213.8 292 43.8
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.4e-53 213.4 423 37.8
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 4.4e-53 213.0 568 33.8
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 7.6e-53 212.2 566 32.9
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 3.8e-52 209.9 399 38.8
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 4.9e-52 209.5 440 35.2
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 4.9e-52 209.5 292 41.4
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.4e-51 208.0 599 31.6
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 4.2e-51 206.5 429 33.3
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 3.5e-50 203.4 472 36.2
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 3.5e-50 203.4 433 34.9
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 3.5e-50 203.4 461 33.6
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.9e-48 197.6 463 34.3
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 1.9e-48 197.6 324 40.4
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 2.1e-47 194.1 408 36.3
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 6.2e-47 192.6 389 38.8
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.1e-46 191.8 563 29.0
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.1e-46 191.8 287 41.5
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 1.8e-46 191.0 479 33.8
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 4.0e-46 189.9 503 31.2
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 6.9e-46 189.1 471 33.5
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 2.2e-44 184.1 247 40.9
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 4.2e-43 179.9 355 41.7
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 7.8e-42 175.6 519 30.6
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 7.8e-42 175.6 514 31.5
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.1e-39 167.5 429 34.5
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.1e-38 165.2 524 29.6
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 4.0e-38 163.3 271 37.6
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 9.0e-38 162.2 271 36.9
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 9.0e-38 162.2 271 36.9
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 1.2e-37 161.8 558 30.5
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.0e-37 161.0 514 30.5
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 9.9e-37 158.7 271 36.5
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 9.9e-37 158.7 434 34.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 3.5e-34 150.2 272 35.7
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 4.6e-34 149.8 319 37.0
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.6e-31 141.4 238 39.1
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 8.1e-31 139.0 461 28.6
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 2.4e-30 137.5 269 38.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 7.1e-27 125.9 424 30.9
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 4.6e-26 123.2 512 27.9
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 1.5e-24 118.2 377 30.5
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 9.6e-24 115.5 272 34.6
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 4.0e-22 110.2 482 28.0
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 9.0e-22 109.0 215 36.7
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 1.3e-12 78.6 99 47.5
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 4.2e-11 73.6 69 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1621 Anthoceros agrestis HOM05D006489 ORTHO05D007556 1.3e-07 62.0 157 31.2
Mapoly0045s0076 Marchantia polymorpha HOM05D006489 ORTHO05D007556 4.1e-06 57.0 179 28.5


User provided reference genes

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