Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037640001 Vitis vinifera HOM05D008272 ORTHO05D010429 1.7e-193 679.1 328 100.0
Eucgr.F03464 Eucalyptus grandis HOM05D008272 ORTHO05D010429 2.5e-136 489.2 316 72.8
Potri.011G138900 Populus trichocarpa HOM05D008272 ORTHO05D010429 4.0e-134 481.9 317 71.9
Thecc.07G038600 Theobroma cacao HOM05D008272 ORTHO05D010429 8.9e-134 480.7 324 69.8
QL08p010511 Quercus lobata HOM05D008272 ORTHO05D010429 2.9e-132 475.7 320 70.6
CiPaw.12G129300 Carya illinoinensis HOM05D008272 ORTHO05D010429 8.3e-132 474.2 317 70.3
Cpa.g.sc97.8 Carica papaya HOM05D008272 ORTHO05D010429 3.2e-131 472.2 318 70.8
Duzib170G0415 Durio zibethinus HOM05D008272 ORTHO05D010429 1.2e-130 470.3 321 68.8
arahy.Tifrunner.gnm1.ann1.UDA7AK Arachis hypogaea HOM05D008272 ORTHO05D010429 5.9e-130 468.0 317 71.3
arahy.Tifrunner.gnm1.ann1.MV6CSW Arachis hypogaea HOM05D008272 ORTHO05D010429 1.3e-129 466.8 321 71.3
CiPaw.11G188800 Carya illinoinensis HOM05D008272 ORTHO05D010429 3.0e-129 465.7 321 69.2
ClCG10G005430 Citrullus lanatus HOM05D008272 ORTHO05D010429 3.9e-129 465.3 317 70.7
Ciclev10008983m.g Citrus clementina HOM05D008272 ORTHO05D010429 5.0e-129 464.9 319 69.0
Gohir.D01G066300 Gossypium hirsutum HOM05D008272 ORTHO05D010429 8.6e-129 464.2 323 68.1
VMungo0647G0594 Vigna mungo HOM05D008272 ORTHO05D010429 1.1e-128 463.8 317 70.7
Lalb_Chr17g0348421 Lupinus albus HOM05D008272 ORTHO05D010429 9.5e-128 460.7 317 68.8
Manes.15G072400 Manihot esculenta HOM05D008272 ORTHO05D010429 4.7e-127 458.4 317 70.0
Gohir.A01G079200 Gossypium hirsutum HOM05D008272 ORTHO05D010429 1.4e-126 456.8 323 67.8
MELO3C025383.2 Cucumis melo HOM05D008272 ORTHO05D010429 4.4e-125 451.8 316 68.4
CsaV3_3G005170 Cucumis sativus L. HOM05D008272 ORTHO05D010429 5.8e-125 451.4 316 68.0
Eucgr.F00768 Eucalyptus grandis HOM05D008272 ORTHO05D010429 1.3e-124 450.3 321 65.4
Hund23252 Selenicereus undatus HOM05D008272 ORTHO05D010429 3.2e-123 445.7 373 59.8
RcHm_v2.0_Chr5g0039361 Rosa chinensis HOM05D008272 ORTHO05D010429 3.3e-120 435.6 324 66.0
Cc05_g13720 Coffea canephora HOM05D008272 ORTHO05D010429 3.6e-119 432.2 318 66.0
Gorai.002G088200 Gossypium raimondii HOM05D008272 ORTHO05D010429 1.3e-116 423.7 323 63.5
Hund01995 Selenicereus undatus HOM05D008272 ORTHO05D010429 2.2e-116 422.9 281 70.1
Haze_09670 Corylus avellana HOM05D008272 ORTHO05D010429 2.7e-114 416.0 319 63.6
Migut.M01769 Erythranthe guttata HOM05D008272 ORTHO05D010429 2.3e-113 412.9 267 72.7
Hund14975 Selenicereus undatus HOM05D008272 ORTHO05D010429 3.9e-113 412.1 369 55.8
Lj1A872T54 Lonicera japonica HOM05D008272 ORTHO05D010429 3.6e-111 405.6 315 63.2
PGR031G2232 Punica granatum HOM05D008272 ORTHO05D010429 8.1e-111 404.4 320 63.1
HPP92_011139 Vanilla planifolia HOM05D008272 ORTHO05D010429 8.9e-110 401.0 270 69.3
Hma1.2p1_1162F.1_g262620 Hydrangea macrophylla HOM05D008272 ORTHO05D010429 2.0e-109 399.8 258 72.9
PGR083G1743 Punica granatum HOM05D008272 ORTHO05D010429 2.0e-109 399.8 319 60.8
FAN24G3338 Fragaria x ananassa HOM05D008272 ORTHO05D010429 4.9e-108 395.2 318 61.9
EL10Ac4g07813 Beta vulgaris HOM05D008272 ORTHO05D010429 1.9e-107 393.3 309 60.5
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 1.5e-104 383.6 293 62.5
ATR0752G027 Amborella trichopoda HOM05D008272 ORTHO05D010429 2.5e-104 382.9 320 59.7
Duzib213G0361 Durio zibethinus HOM05D008272 ORTHO05D010429 4.4e-101 372.1 268 66.4
MBI02_g22115_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 8.4e-100 367.9 285 62.1
SMO119G0124 Selaginella moellendorffii HOM05D008272 ORTHO05D010429 1.4e-99 367.1 270 63.3
COL.COLO4_09657 Corchorus olitorius HOM05D008272 ORTHO05D010429 4.3e-96 355.5 199 80.9
VMungo0540G1205 Vigna mungo HOM05D008272 ORTHO05D010429 1.6e-95 353.6 247 68.4
Os04g0625200 Oryza sativa ssp. japonica HOM05D008272 ORTHO05D010429 6.2e-95 351.7 233 71.2
Thecc.07G038700 Theobroma cacao HOM05D008272 ORTHO05D010429 1.1e-94 350.9 204 77.9
Nn004s41404 Nelumbo nucifera HOM05D008272 ORTHO05D010429 1.9e-88 330.1 245 66.1
MBI16_g12297_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 2.9e-76 289.7 191 71.7
FvH4_2g04690 Fragaria vesca HOM05D008272 ORTHO05D010429 1.4e-75 287.3 318 49.7
Sc16g0006090 Simmondsia chinensis HOM05D008272 ORTHO05D010429 3.5e-74 282.7 261 56.7
CAN.G337.128 Capsicum annuum HOM05D008272 ORTHO05D010429 6.9e-70 268.5 307 48.5
Sc03g0008620 Simmondsia chinensis HOM05D008272 ORTHO05D010429 1.3e-68 264.2 210 60.5
Sabra11G0124700 Salix brachista HOM05D008272 ORTHO05D010429 1.9e-64 250.4 148 76.4
Sabra11G0124400 Salix brachista HOM05D008272 ORTHO05D010429 5.1e-57 225.7 137 75.9
MD11G1219100 Malus domestica HOM05D008272 ORTHO05D010429 5.9e-53 212.2 318 39.0
unitig_578.g15997 Utricularia gibba HOM05D008272 ORTHO05D010429 1.0e-49 201.4 126 71.4
Phvul.L001633 Phaseolus vulgaris HOM05D008272 ORTHO05D010429 6.3e-47 192.2 116 75.9
Oeu020117.1 Olea europaea HOM05D008272 ORTHO05D010429 4.0e-25 119.8 115 57.4
Cfa020968 Carpinus fangiana HOM05D008272 ORTHO05D010429 5.2e-25 119.4 62 82.3
MD03G1201900 Malus domestica HOM05D008272 ORTHO05D010429 5.6e-19 99.4 60 75.0
PRCOL_00003374 Prasinoderma coloniale HOM05D008272 ORTHO05D010429 1.2e-16 91.7 148 33.8
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 2.0e-16 90.9 158 35.4
arahy.Tifrunner.gnm1.ann1.39PYJI Arachis hypogaea HOM05D008272 ORTHO05D010429 2.6e-16 90.5 128 43.8
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 2.6e-16 90.5 184 33.7
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 5.7e-16 89.4 131 40.5
PRCOL_00000503 Prasinoderma coloniale HOM05D006248 ORTHO05D007896 1.7e-15 87.8 134 38.8
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 1.7e-15 87.8 160 32.5
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 2.2e-15 87.4 160 34.4
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 2.9e-15 87.0 155 32.9
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 6.4e-15 85.9 207 31.4
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 6.4e-15 85.9 157 32.5
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 6.4e-15 85.9 155 33.5
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 8.3e-15 85.5 131 38.2
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 1.1e-14 85.1 160 34.4
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 1.4e-14 84.7 160 33.1
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 1.4e-14 84.7 131 37.4
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 1.4e-14 84.7 155 32.3
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 1.4e-14 84.7 158 35.4
MCO11G046 Micromonas commoda HOM05D006248 ORTHO05D007896 1.8e-14 84.3 163 28.8
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 1.8e-14 84.3 134 35.8
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 2.4e-14 84.0 159 34.0
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 2.4e-14 84.0 131 35.9
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 2.4e-14 84.0 155 32.9
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 3.2e-14 83.6 131 35.9
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 3.2e-14 83.6 134 35.1
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 3.2e-14 83.6 134 35.1
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 3.2e-14 83.6 139 36.7
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 3.2e-14 83.6 119 37.8
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 4.1e-14 83.2 134 35.1
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 4.1e-14 83.2 134 35.1
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 4.1e-14 83.2 134 35.1
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 4.1e-14 83.2 134 35.1
PRCOL_00006194 Prasinoderma coloniale HOM05D006248 ORTHO05D010429 4.1e-14 83.2 134 34.3
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 4.1e-14 83.2 128 34.4
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 4.1e-14 83.2 155 32.9
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 4.1e-14 83.2 155 32.9
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 4.1e-14 83.2 162 32.7
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 5.4e-14 82.8 131 36.6
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 5.4e-14 82.8 131 36.6
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 5.4e-14 82.8 139 36.0
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 5.4e-14 82.8 131 35.9
CDE11G0689 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 5.4e-14 82.8 126 35.7
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 5.4e-14 82.8 185 30.3
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 7.0e-14 82.4 139 35.3
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 7.0e-14 82.4 132 37.9
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 7.0e-14 82.4 131 33.6
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 7.0e-14 82.4 131 36.6
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 7.0e-14 82.4 131 35.9
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 7.0e-14 82.4 155 32.9
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 7.0e-14 82.4 146 35.6
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 7.0e-14 82.4 136 35.3
unitig_746.g26565 Utricularia gibba HOM05D006248 ORTHO05D007896 7.0e-14 82.4 131 34.4
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 7.0e-14 82.4 148 33.1
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 9.2e-14 82.0 168 30.4
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 9.2e-14 82.0 150 33.3
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 1.6e-13 81.3 197 30.5
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 1.6e-13 81.3 128 33.6
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 1.6e-13 81.3 131 35.1
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 1.6e-13 81.3 131 32.8
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 2.0e-13 80.9 131 35.1
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 2.0e-13 80.9 131 32.8
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 2.0e-13 80.9 131 35.1
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 2.7e-13 80.5 131 35.1
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 2.7e-13 80.5 131 35.1
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 2.7e-13 80.5 131 35.9
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 3.5e-13 80.1 131 35.1
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 3.5e-13 80.1 131 35.9
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 3.5e-13 80.1 142 32.4
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 3.5e-13 80.1 136 35.3
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 3.5e-13 80.1 131 35.1
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 3.5e-13 80.1 131 34.4
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 4.6e-13 79.7 139 35.3
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 4.6e-13 79.7 131 33.6
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 4.6e-13 79.7 165 32.7
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 5.9e-13 79.3 139 35.3
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 5.9e-13 79.3 131 33.6
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 5.9e-13 79.3 165 32.7
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 5.9e-13 79.3 131 35.1
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 7.8e-13 79.0 130 34.6
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 7.8e-13 79.0 131 35.1
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 7.8e-13 79.0 131 33.6
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 7.8e-13 79.0 197 28.4
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 7.8e-13 79.0 145 31.7
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 7.8e-13 79.0 131 33.6
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 7.8e-13 79.0 131 35.1
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 7.8e-13 79.0 160 31.2
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 7.8e-13 79.0 142 32.4
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 7.8e-13 79.0 136 35.3
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 7.8e-13 79.0 126 34.1
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 7.8e-13 79.0 146 34.9
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 7.8e-13 79.0 131 36.6
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 1.0e-12 78.6 250 24.0
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 1.3e-12 78.2 131 35.1
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 1.3e-12 78.2 131 32.1
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 1.3e-12 78.2 165 32.1
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.3e-12 78.2 131 34.4
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 1.3e-12 78.2 126 34.1
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 1.3e-12 78.2 131 34.4
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.7e-12 77.8 131 33.6
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 1.7e-12 77.8 131 33.6
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 1.7e-12 77.8 131 33.6
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 1.7e-12 77.8 131 33.6
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 2.3e-12 77.4 130 36.2
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 3.9e-12 76.6 131 34.4
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 3.9e-12 76.6 127 32.3
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 6.6e-12 75.9 131 32.8
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 8.6e-12 75.5 197 25.9
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 1.1e-11 75.1 128 32.0
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 1.5e-11 74.7 131 33.6
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 1.5e-11 74.7 126 33.3
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 5.6e-11 72.8 116 31.9
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 7.3e-11 72.4 116 33.6
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 1.2e-10 71.6 131 35.1
Cre09.g398289 Chlamydomonas reinhardtii HOM05D006248 ORTHO05D007896 1.2e-10 71.6 151 30.5
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 6.2e-10 69.3 126 30.2
Hma1.2p1_0222F.1_g093600 Hydrangea macrophylla HOM05D006248 ORTHO05D007896 1.8e-09 67.8 152 28.3
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 1.8e-09 67.8 131 29.8
COL.COLO4_18812 Corchorus olitorius HOM05D006248 ORTHO05D007896 2.4e-06 57.4 48 52.1
VMungo0720G3169 Vigna mungo HOM05D006248 ORTHO05D007896 2.4e-06 57.4 109 32.1
Sabra06G0139600 Salix brachista HOM05D006248 ORTHO05D007896 3.2e-06 57.0 105 29.5


User provided reference genes

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