Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 4.4e-56 221.1 114 100.0
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.5e-32 142.9 120 64.2
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 1.7e-31 139.4 129 64.3
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 2.2e-31 139.0 130 61.5
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 3.8e-31 138.3 88 73.9
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 8.4e-31 137.1 114 65.8
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 8.4e-31 137.1 118 59.3
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 8.4e-31 137.1 118 60.2
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 1.1e-30 136.7 125 62.4
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 1.9e-30 136.0 92 76.1
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.9e-30 136.0 85 75.3
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 4.1e-30 134.8 94 69.1
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 4.1e-30 134.8 130 59.2
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 4.1e-30 134.8 91 76.9
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 4.1e-30 134.8 116 62.9
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 5.4e-30 134.4 116 60.3
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 5.4e-30 134.4 115 60.0
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 7.1e-30 134.0 115 60.0
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 1.2e-29 133.3 118 58.5
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 1.2e-29 133.3 126 60.3
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.6e-29 132.9 122 59.0
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.6e-29 132.9 122 59.0
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.6e-29 132.9 128 57.8
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 2.1e-29 132.5 124 58.9
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 2.7e-29 132.1 116 59.5
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 2.7e-29 132.1 116 59.5
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 2.7e-29 132.1 107 64.5
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 3.5e-29 131.7 91 72.5
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 4.6e-29 131.3 88 70.5
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 4.6e-29 131.3 84 71.4
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 4.6e-29 131.3 92 71.7
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 6.0e-29 131.0 94 67.0
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 6.0e-29 131.0 120 59.2
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 6.0e-29 131.0 89 74.2
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 7.8e-29 130.6 84 71.4
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 7.8e-29 130.6 95 63.2
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 7.8e-29 130.6 71 88.7
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 7.8e-29 130.6 113 61.9
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 1.0e-28 130.2 94 66.0
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 1.0e-28 130.2 117 61.5
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 1.0e-28 130.2 115 62.6
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 1.3e-28 129.8 88 72.7
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 1.3e-28 129.8 91 70.3
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 1.3e-28 129.8 97 68.0
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 1.7e-28 129.4 80 77.5
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 1.7e-28 129.4 90 72.2
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 1.7e-28 129.4 75 80.0
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 1.7e-28 129.4 126 57.1
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 2.3e-28 129.0 84 70.2
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 2.3e-28 129.0 94 66.0
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 2.3e-28 129.0 84 70.2
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 2.3e-28 129.0 115 62.6
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 2.3e-28 129.0 98 63.3
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 2.3e-28 129.0 76 81.6
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 3.0e-28 128.6 93 69.9
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 3.0e-28 128.6 85 76.5
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 3.0e-28 128.6 91 70.3
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 3.9e-28 128.3 94 66.0
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 3.9e-28 128.3 91 65.9
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 3.9e-28 128.3 123 59.3
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 3.9e-28 128.3 127 55.9
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 5.1e-28 127.9 89 69.7
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 5.1e-28 127.9 92 69.6
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 6.6e-28 127.5 93 71.0
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 6.6e-28 127.5 93 71.0
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 8.6e-28 127.1 74 83.8
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 8.6e-28 127.1 75 80.0
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 8.6e-28 127.1 122 59.0
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 1.1e-27 126.7 95 61.1
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 1.1e-27 126.7 116 58.6
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 1.5e-27 126.3 85 74.1
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 1.9e-27 125.9 96 67.7
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 1.9e-27 125.9 90 70.0
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 1.9e-27 125.9 107 62.6
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 1.9e-27 125.9 122 58.2
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 2.5e-27 125.6 74 79.7
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 3.3e-27 125.2 102 63.7
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 3.3e-27 125.2 97 60.8
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 4.3e-27 124.8 91 67.0
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 4.3e-27 124.8 97 60.8
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.2e-26 123.2 75 77.3
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 1.6e-26 122.9 73 78.1
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.6e-26 122.9 121 57.9
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 1.6e-26 122.9 91 68.1
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 8.1e-26 120.6 118 55.9
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 1.8e-25 119.4 69 81.2
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 2.0e-24 115.9 97 60.8
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 2.6e-24 115.5 85 67.1
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 2.6e-24 115.5 94 59.6
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 9.9e-24 113.6 99 60.6
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 2.2e-23 112.5 87 63.2
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 8.4e-23 110.5 87 62.1
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 1.2e-21 106.7 73 64.4
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 4.6e-21 104.8 113 53.1
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.7e-20 102.8 71 67.6
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 2.3e-20 102.4 80 61.2
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 3.9e-20 101.7 73 57.5
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 5.1e-20 101.3 81 56.8
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 3.3e-19 98.6 63 73.0
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 2.1e-18 95.9 70 61.4
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 2.1e-18 95.9 89 57.3
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 6.2e-18 94.4 56 75.0
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 1.1e-17 93.6 113 46.0
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 1.2e-16 90.1 67 56.7
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 2.0e-16 89.4 64 59.4
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 4.8e-10 68.2 62 59.7
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 4.0e-09 65.1 37 73.0
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 9.0e-09 63.9 61 59.0
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.5e-08 63.2 35 80.0
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 5.8e-08 61.2 40 72.5
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.1e-06 57.0 53 50.9
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.4e-06 56.6 38 68.4
Gohir.D09G100550 Gossypium hirsutum HOM05D007267 ORTHO05D009053 4.2e-06 55.1 54 50.0
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 4.2e-06 55.1 46 58.7


User provided reference genes

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