Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.4e-229 799.3 395 100.0
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 5.8e-180 634.4 401 79.1
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 5.8e-180 634.4 398 79.6
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.9e-178 629.4 398 78.4
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.6e-177 626.3 390 79.7
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.1e-177 625.9 390 77.7
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.5e-175 619.8 393 76.6
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.2e-174 616.7 402 76.9
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.8e-173 612.8 391 78.0
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.4e-173 612.5 387 77.8
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 5.2e-173 611.3 401 76.8
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 8.9e-173 610.5 385 78.7
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.2e-172 610.1 388 76.5
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.2e-172 610.1 399 76.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.5e-172 609.8 388 78.4
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 7.6e-172 607.4 394 75.9
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.7e-171 606.3 394 76.4
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.9e-171 605.5 392 76.8
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.8e-171 605.1 391 77.2
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 8.4e-171 604.0 383 77.8
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.1e-170 603.6 389 76.6
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 3.2e-170 602.1 393 75.8
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.2e-169 600.1 384 77.6
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.1e-169 599.4 388 76.3
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 2.1e-169 599.4 396 75.5
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 2.1e-169 599.4 396 75.5
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 3.5e-169 598.6 384 76.8
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 6.0e-169 597.8 391 75.2
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 6.0e-169 597.8 396 75.3
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 7.8e-169 597.4 386 76.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 7.8e-169 597.4 401 74.8
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 1.3e-168 596.7 391 75.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.7e-168 596.3 393 75.8
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 3.9e-168 595.1 384 76.0
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.9e-168 595.1 385 77.1
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 6.6e-168 594.3 395 74.4
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 8.7e-168 594.0 401 74.1
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.1e-167 593.6 383 76.8
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 5.6e-167 591.3 383 76.8
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.2e-166 590.1 380 76.1
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 3.6e-166 588.6 384 75.8
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 4.7e-166 588.2 402 73.6
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 8.1e-166 587.4 385 76.1
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.1e-165 587.0 384 76.3
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.1e-165 587.0 383 75.2
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.1e-165 587.0 371 78.7
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.2e-164 583.6 384 76.0
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 3.4e-164 582.0 386 74.1
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 9.9e-164 580.5 387 75.7
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.7e-163 579.7 402 74.1
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 2.2e-163 579.3 398 73.9
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 2.9e-163 578.9 384 75.5
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 2.9e-163 578.9 443 67.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 6.4e-163 577.8 389 73.5
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 6.4e-163 577.8 396 74.7
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 6.4e-163 577.8 376 76.3
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.1e-162 577.0 384 74.5
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 3.2e-162 575.5 373 74.3
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 4.2e-162 575.1 391 73.7
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.2e-162 575.1 390 72.1
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 5.4e-162 574.7 386 74.6
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 3.5e-161 572.0 391 72.4
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 7.8e-161 570.9 419 70.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.3e-160 570.1 382 74.6
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 6.6e-160 567.8 365 75.3
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.9e-159 566.2 392 72.4
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 9.6e-159 563.9 340 79.1
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 3.6e-158 562.0 382 72.0
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.8e-158 561.6 387 71.8
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 8.1e-158 560.8 370 73.2
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.1e-157 560.5 332 81.0
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 1.1e-157 560.5 394 70.8
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 3.1e-157 558.9 375 75.5
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.0e-157 558.5 337 80.4
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 9.0e-157 557.4 370 73.2
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 9.0e-157 557.4 375 72.8
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 9.0e-157 557.4 337 80.1
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 9.0e-157 557.4 337 80.1
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 9.0e-157 557.4 337 80.4
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.2e-156 557.0 336 78.6
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.2e-156 557.0 397 70.5
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.5e-156 556.6 348 75.9
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.3e-155 553.5 382 71.5
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.3e-155 553.5 382 71.5
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 3.8e-155 552.0 331 78.5
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.8e-155 552.0 320 83.1
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 4.9e-155 551.6 374 72.5
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 4.9e-155 551.6 374 72.5
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 4.9e-155 551.6 374 72.2
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 4.9e-155 551.6 387 69.8
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.8e-152 543.1 394 69.5
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 6.7e-152 541.2 369 74.5
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 7.4e-151 537.7 380 72.1
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.6e-150 536.6 384 69.8
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 1.6e-150 536.6 383 71.8
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.8e-150 535.8 398 69.8
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 6.2e-150 534.6 423 63.4
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.4e-149 533.5 387 71.3
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.2e-148 530.4 299 86.0
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.4e-146 523.5 339 77.3
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 3.0e-144 515.8 427 64.4
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.3e-139 500.4 345 73.6
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 4.6e-137 491.9 374 66.6
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.7e-129 466.1 324 69.1
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.7e-129 466.1 323 70.0
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.3e-128 463.0 308 75.6
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 6.9e-125 451.4 329 66.6
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.2e-122 442.6 328 64.9
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.1e-114 417.5 271 77.1
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 3.2e-114 416.0 328 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.6e-108 397.1 304 66.8
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 3.1e-85 319.7 302 54.0
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 2.7e-84 316.6 288 55.2
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.3e-83 314.3 299 57.5
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.9e-82 310.5 306 50.0
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 6.0e-76 288.9 180 75.6
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 4.3e-66 256.1 203 65.5
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.2e-53 213.4 177 62.1
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.5e-50 203.8 130 72.3
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.7e-43 181.0 123 74.8
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.5e-34 150.6 102 71.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.9e-30 136.3 128 55.5
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 7.4e-26 122.5 124 55.6
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 5.5e-21 106.3 158 39.2
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.0e-19 100.5 106 50.9
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.7e-18 96.3 64 71.9
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 9.0e-16 89.0 50 78.0


User provided reference genes

Program Settings