Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 2.7e-21 105.9 151 100.0
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 3.0e-12 75.9 47 83.0
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 2.6e-11 72.8 50 80.0
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 3.3e-11 72.4 50 72.0
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 7.5e-11 71.2 51 76.5
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 2.2e-10 69.7 58 63.8
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 2.8e-10 69.3 51 76.5
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 3.7e-10 68.9 42 85.7
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 3.7e-10 68.9 47 74.5
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 4.8e-10 68.6 51 74.5
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 4.8e-10 68.6 52 73.1
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 4.8e-10 68.6 49 73.5
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 6.3e-10 68.2 56 69.6
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 8.2e-10 67.8 40 85.0
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 8.2e-10 67.8 50 72.0
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.1e-09 67.4 52 71.2
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 1.4e-09 67.0 42 76.2
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 1.8e-09 66.6 51 72.5
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 1.8e-09 66.6 51 64.7
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 1.8e-09 66.6 43 79.1
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 2.4e-09 66.2 57 68.4
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 2.4e-09 66.2 57 68.4
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 2.4e-09 66.2 49 67.3
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 2.4e-09 66.2 50 76.0
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 3.1e-09 65.9 49 71.4
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 4.1e-09 65.5 50 70.0
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 4.1e-09 65.5 50 70.0
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 4.1e-09 65.5 49 67.3
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 4.1e-09 65.5 49 67.3
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 5.3e-09 65.1 48 64.6
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 5.3e-09 65.1 49 69.4
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 7.0e-09 64.7 52 67.3
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 7.0e-09 64.7 51 70.6
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 9.1e-09 64.3 52 67.3
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 1.2e-08 63.9 51 60.8
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 1.2e-08 63.9 49 73.5
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 1.6e-08 63.5 43 76.7
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 1.6e-08 63.5 44 72.7
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 2.0e-08 63.2 52 73.1
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 2.0e-08 63.2 56 64.3
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 2.0e-08 63.2 45 66.7
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 2.0e-08 63.2 53 64.2
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 2.7e-08 62.8 40 77.5
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 2.7e-08 62.8 57 64.9
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 2.7e-08 62.8 51 68.6
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 2.7e-08 62.8 51 68.6
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 2.7e-08 62.8 54 63.0
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 2.7e-08 62.8 54 63.0
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 2.7e-08 62.8 54 63.0
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 2.7e-08 62.8 49 65.3
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 2.7e-08 62.8 51 64.7
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 3.5e-08 62.4 52 67.3
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 3.5e-08 62.4 54 63.0
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 3.5e-08 62.4 49 67.3
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 4.5e-08 62.0 51 66.7
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 4.5e-08 62.0 47 72.3
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 5.9e-08 61.6 47 68.1
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 5.9e-08 61.6 40 75.0
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 5.9e-08 61.6 51 62.7
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 5.9e-08 61.6 52 67.3
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 7.7e-08 61.2 46 67.4
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 7.7e-08 61.2 42 73.8
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 7.7e-08 61.2 40 75.0
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 1.3e-07 60.5 47 72.3
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 1.3e-07 60.5 40 70.0
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 1.7e-07 60.1 51 62.7
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 1.7e-07 60.1 47 63.8
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 2.2e-07 59.7 53 62.3
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 2.2e-07 59.7 53 62.3
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 2.2e-07 59.7 53 62.3
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 2.2e-07 59.7 40 70.0
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 2.2e-07 59.7 40 72.5
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 2.2e-07 59.7 48 66.7
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 2.2e-07 59.7 51 60.8
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 2.2e-07 59.7 53 62.3
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 2.2e-07 59.7 51 64.7
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.9e-07 59.3 40 75.0
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 2.9e-07 59.3 40 75.0
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 3.8e-07 58.9 38 73.7
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 5.0e-07 58.5 51 56.9
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 5.0e-07 58.5 51 58.8
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 5.0e-07 58.5 43 72.1
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 5.0e-07 58.5 51 60.8
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 6.5e-07 58.2 51 64.7
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 6.5e-07 58.2 51 64.7
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 8.5e-07 57.8 40 70.0
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 8.5e-07 57.8 48 60.4
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 1.1e-06 57.4 47 66.0
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 1.1e-06 57.4 48 62.5
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 2.5e-06 56.2 32 87.5
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 3.2e-06 55.8 41 68.3
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 3.2e-06 55.8 51 54.9
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 3.2e-06 55.8 51 56.9
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 4.2e-06 55.5 38 73.7


User provided reference genes

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