Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 7.1e-184 647.1 326 100.0
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 1.3e-140 503.4 327 77.7
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 1.1e-136 490.3 329 73.9
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 2.7e-135 485.7 283 83.7
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 5.2e-134 481.5 325 75.1
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 5.7e-133 478.0 325 72.6
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 4.8e-132 474.9 325 72.3
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 1.4e-131 473.4 302 78.5
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 7.0e-131 471.1 335 71.9
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 5.9e-130 468.0 327 71.9
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 1.1e-128 463.8 347 70.3
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 2.5e-128 462.6 309 71.8
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 7.2e-128 461.1 327 71.3
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 4.7e-127 458.4 318 72.0
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 2.3e-126 456.1 302 75.8
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 8.8e-126 454.1 318 70.4
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 5.7e-125 451.4 294 72.4
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 2.2e-124 449.5 313 70.6
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 3.7e-124 448.7 331 67.7
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 8.3e-124 447.6 326 69.9
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 4.1e-123 445.3 327 69.1
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 7.0e-123 444.5 322 68.6
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 9.1e-123 444.1 304 69.1
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 2.0e-122 443.0 319 69.3
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 4.5e-122 441.8 323 68.7
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 4.5e-122 441.8 336 67.0
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 1.7e-121 439.9 328 67.4
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 2.9e-121 439.1 304 68.1
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 6.5e-121 438.0 295 70.2
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 8.6e-121 437.6 322 67.4
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 2.5e-120 436.0 312 67.6
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 1.2e-119 433.7 312 66.3
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 1.6e-119 433.3 319 68.0
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 2.8e-119 432.6 333 65.8
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 3.6e-119 432.2 323 66.9
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 8.0e-119 431.0 327 66.4
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 3.0e-118 429.1 308 68.2
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 2.0e-117 426.4 311 68.5
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 2.6e-117 426.0 304 67.8
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 1.8e-115 419.9 287 70.4
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 2.4e-115 419.5 311 65.6
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 7.0e-115 417.9 310 65.8
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 2.9e-113 412.5 312 65.4
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 3.8e-113 412.1 291 71.8
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 5.0e-113 411.8 293 66.6
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 3.3e-112 409.1 295 67.8
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 4.3e-112 408.7 268 73.5
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 7.3e-112 407.9 316 62.3
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 2.8e-111 406.0 293 65.5
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 2.8e-111 406.0 293 66.2
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 8.9e-110 401.0 294 66.3
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 9.8e-109 397.5 377 56.8
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.2e-108 396.4 273 71.4
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 8.3e-108 394.4 296 66.2
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 8.3e-108 394.4 326 59.5
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.4e-107 393.7 293 67.9
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.8e-107 393.3 293 64.2
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 1.6e-106 390.2 326 59.5
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 2.7e-106 389.4 293 63.1
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 1.0e-105 387.5 300 62.0
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 1.7e-105 386.7 293 62.8
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 3.0e-105 386.0 293 66.6
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.9e-105 385.6 270 70.4
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 5.0e-105 385.2 293 62.8
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 2.1e-103 379.8 323 59.1
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 4.7e-103 378.6 301 62.5
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 8.0e-103 377.9 323 58.8
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 2.3e-102 376.3 248 73.8
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.5e-101 373.6 318 61.6
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 2.0e-101 373.2 285 63.2
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.3e-100 370.5 285 62.5
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 1.7e-100 370.2 323 59.1
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 4.9e-100 368.6 285 62.5
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 9.2e-99 364.4 314 57.3
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 4.6e-98 362.1 296 57.8
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 3.3e-96 355.9 332 56.0
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 4.0e-94 349.0 323 59.1
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 1.2e-82 310.8 203 74.4
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 6.6e-81 305.1 205 71.7
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 6.6e-81 305.1 212 71.7
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 3.6e-79 299.3 357 49.9
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 2.4e-78 296.6 206 69.9
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 3.4e-77 292.7 269 59.5
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.9e-75 287.0 319 43.3
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 9.3e-75 284.6 205 65.4
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 9.6e-72 274.6 210 62.4
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.3e-71 274.2 278 54.7
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 2.1e-71 273.5 242 59.5
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.9e-64 250.4 184 69.0
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 3.5e-58 229.6 286 48.6
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 4.6e-58 229.2 291 45.7
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 3.7e-55 219.5 312 40.1
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 2.6e-53 213.4 301 45.8
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 9.3e-51 204.9 123 78.9
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 1.4e-46 191.0 211 45.0
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 1.6e-42 177.6 164 56.7
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 3.3e-40 169.9 126 63.5
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 4.8e-39 166.0 110 74.5
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 2.6e-37 160.2 97 77.3
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.7e-37 158.7 117 66.7
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 5.5e-35 152.5 295 32.9
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 2.1e-34 150.6 124 62.1
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 7.9e-34 148.7 92 76.1
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 1.8e-30 137.5 80 68.8
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 5.0e-28 129.4 80 76.2
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 5.5e-27 125.9 180 44.4
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 6.7e-25 119.0 89 69.7
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 5.7e-24 115.9 89 68.5
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 1.1e-22 111.7 162 34.0
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 3.1e-22 110.2 287 28.6
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 1.3e-20 104.8 89 64.0
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 4.2e-19 99.8 66 68.2
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.8e-12 76.6 154 35.7
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.8e-12 76.6 154 35.7
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 8.5e-12 75.5 154 35.7
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 5.5e-11 72.8 138 37.0
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 2.7e-10 70.5 217 27.6
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 6.1e-10 69.3 42 83.3
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 1.3e-07 61.6 45 68.9
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 1.1e-06 58.5 56 57.1


User provided reference genes

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