Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036947001 Vitis vinifera HOM05D000595 ORTHO05D004141 4.4e-222 774.2 376 100.0
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.9e-196 689.1 363 93.7
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 9.1e-167 590.5 361 77.8
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 4.8e-160 568.2 363 73.3
CANSAT21G1418 Cannabis sativa HOM05D000595 ORTHO05D004141 1.8e-159 566.2 363 73.6
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 3.1e-159 565.5 362 74.3
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 1.2e-158 563.5 358 74.3
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 2.0e-158 562.8 361 73.7
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 2.0e-158 562.8 362 72.9
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 1.3e-157 560.1 358 73.7
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 1.3e-157 560.1 361 71.7
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 1.3e-157 560.1 361 74.0
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 1.7e-157 559.7 361 71.7
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 2.2e-157 559.3 361 72.3
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 2.9e-157 558.9 363 72.5
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 5.0e-157 558.1 361 72.6
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 5.0e-157 558.1 361 71.7
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 7.2e-156 554.3 363 73.6
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 9.4e-156 553.9 359 72.1
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.6e-155 553.1 363 72.2
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 2.1e-155 552.7 362 74.0
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 2.7e-155 552.4 364 74.2
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 3.6e-155 552.0 363 71.6
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 1.8e-154 549.7 358 73.2
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 3.0e-154 548.9 363 73.6
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 8.8e-154 547.4 361 70.6
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 1.2e-153 547.0 361 72.6
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 1.2e-153 547.0 358 72.3
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 4.4e-153 545.0 361 70.9
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 5.7e-153 544.7 395 67.1
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 2.2e-152 542.7 358 71.2
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 2.2e-152 542.7 363 71.1
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 4.9e-152 541.6 363 71.3
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 4.9e-152 541.6 363 70.0
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 6.3e-152 541.2 361 70.9
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 8.3e-152 540.8 361 70.1
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 1.1e-151 540.4 355 70.4
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 1.1e-151 540.4 363 71.3
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 1.4e-151 540.0 361 71.2
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 1.8e-151 539.7 364 71.4
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 3.1e-151 538.9 363 70.5
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 5.4e-151 538.1 361 70.6
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 7.0e-151 537.7 361 70.9
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 9.1e-151 537.3 359 70.2
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 2.0e-150 536.2 358 70.7
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 2.7e-150 535.8 363 70.2
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 5.9e-150 534.6 362 71.3
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 7.7e-150 534.3 359 69.6
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 7.7e-150 534.3 363 70.0
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 7.7e-150 534.3 362 70.4
COL.COLO4_24689 Corchorus olitorius HOM05D000595 ORTHO05D004141 1.3e-149 533.5 358 69.8
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 1.3e-149 533.5 407 65.4
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 2.3e-149 532.7 363 69.7
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 3.8e-149 531.9 363 70.2
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 3.8e-149 531.9 363 70.2
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 5.0e-149 531.6 361 69.5
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 5.0e-149 531.6 360 69.7
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.1e-148 530.4 358 68.2
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 1.9e-148 529.6 358 69.3
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 1.9e-148 529.6 361 72.3
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 4.2e-148 528.5 358 69.0
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 1.2e-147 526.9 364 69.8
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 1.2e-147 526.9 361 68.1
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 2.8e-147 525.8 364 69.8
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.8e-146 523.1 358 67.3
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 1.8e-146 523.1 360 68.9
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 6.8e-146 521.2 364 69.2
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 2.0e-145 519.6 355 68.7
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 3.4e-145 518.8 364 69.2
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 3.7e-144 515.4 363 68.6
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 4.9e-144 515.0 363 65.0
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 4.9e-144 515.0 363 68.3
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 6.3e-144 514.6 363 65.6
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 9.2e-143 510.8 361 68.1
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 1.2e-142 510.4 363 65.3
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 1.2e-142 510.4 363 65.8
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 3.5e-142 508.8 359 67.4
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 4.6e-142 508.4 361 68.1
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 7.8e-142 507.7 361 65.7
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 1.0e-141 507.3 363 68.0
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 1.3e-141 506.9 358 66.2
Sp3g21350 Schrenkiella parvula HOM05D000595 ORTHO05D004141 1.3e-141 506.9 363 64.2
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 1.7e-141 506.5 363 64.5
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 1.1e-140 503.8 382 64.7
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 1.9e-140 503.1 361 65.7
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 3.3e-140 502.3 363 64.2
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 7.3e-140 501.1 358 65.4
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 1.2e-139 500.4 362 66.6
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.2e-139 500.4 361 64.5
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 3.6e-139 498.8 361 64.8
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 3.6e-139 498.8 358 64.0
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 4.0e-138 495.4 355 67.6
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 1.2e-137 493.8 363 62.5
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 2.0e-137 493.0 361 65.7
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 4.4e-137 491.9 363 66.1
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 7.5e-137 491.1 364 62.4
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 2.2e-136 489.6 359 66.0
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 2.9e-136 489.2 363 62.0
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 3.7e-136 488.8 359 63.5
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 1.9e-135 486.5 363 63.1
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 9.2e-135 484.2 360 61.9
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.7e-133 479.9 370 64.6
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 6.6e-133 478.0 359 63.2
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 2.3e-130 469.5 358 62.3
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 1.1e-127 460.7 363 60.6
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.5e-124 449.5 326 66.6
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 7.3e-116 421.4 361 57.1
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 3.1e-106 389.4 338 60.1
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 1.1e-95 354.4 250 66.8
BcaB04g20430 Brassica carinata HOM05D000595 ORTHO05D004141 2.5e-92 343.2 259 61.0
vmacro00078 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 2.1e-91 340.1 229 69.9
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 4.0e-90 335.9 368 44.3
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.6e-89 333.2 364 46.4
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 4.5e-89 332.4 368 45.1
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 6.5e-88 328.6 370 43.5
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 6.5e-88 328.6 358 50.6
RcHm_v2.0_Chr7g0213921 Rosa chinensis HOM05D000595 ORTHO05D004141 3.2e-87 326.2 207 72.5
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 2.8e-83 313.2 361 43.8
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 3.7e-83 312.8 382 44.5
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 6.9e-82 308.5 370 44.6
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 5.0e-80 302.4 366 43.2
HPP92_028112 Vanilla planifolia HOM05D000595 ORTHO05D004141 3.8e-72 276.2 280 49.6
Haze_07993 Corylus avellana HOM05D000595 ORTHO05D004141 2.6e-65 253.4 172 70.9
Cpa.g.sc71.50 Carica papaya HOM05D000595 ORTHO05D004141 1.6e-62 244.2 164 68.9
MBI04_g21144_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 7.9e-62 241.9 197 60.9
vmacro00079 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 8.8e-61 238.4 170 70.6
GSVIVG01013642001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.6e-54 217.6 140 80.0
Haze_07994 Corylus avellana HOM05D000595 ORTHO05D004141 1.1e-52 211.5 134 78.4
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.6e-44 183.7 126 71.4
Cfa012654 Carpinus fangiana HOM05D000595 ORTHO05D004141 1.3e-43 181.4 120 76.7
RcHm_v2.0_Chr7g0213911 Rosa chinensis HOM05D000595 ORTHO05D004141 3.7e-43 179.9 126 68.3
Cfa012656 Carpinus fangiana HOM05D000595 ORTHO05D004141 4.8e-43 179.5 120 71.7
Mapoly0633s0002 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.7e-40 171.0 241 40.2
CARHR000110 Cardamine hirsuta HOM05D000595 ORTHO05D004141 3.8e-40 169.9 109 69.7
Manes.17G004600 Manihot esculenta HOM05D000595 ORTHO05D004141 8.0e-38 162.2 134 62.7
HPP92_024265 Vanilla planifolia HOM05D000595 ORTHO05D004141 3.7e-35 153.3 100 68.0
Cpa.g.sc71.54 Carica papaya HOM05D000595 ORTHO05D004141 5.4e-34 149.4 104 72.1
CSS0050335 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 1.1e-31 141.7 102 69.6
Thecc.05G000100 Theobroma cacao HOM05D000595 ORTHO05D004141 1.5e-31 141.4 106 62.3
FAN18G1127 Fragaria x ananassa HOM05D000595 ORTHO05D004141 2.5e-31 140.6 86 72.1
Cpa.g.sc71.52 Carica papaya HOM05D000595 ORTHO05D004141 4.0e-29 133.3 87 72.4
CSS0006745 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 3.4e-28 130.2 111 59.5
Cc08_g05420 Coffea canephora HOM05D000595 ORTHO05D004141 3.2e-26 123.6 85 70.6
Oeu042228.5 Olea europaea HOM05D000595 ORTHO05D004141 9.2e-26 122.1 82 70.7
Ca_25052_v3 Cicer arietinum L. HOM05D002908 ORTHO05D009379 4.6e-25 119.8 68 82.4
Oeu042206.1 Olea europaea HOM05D000595 ORTHO05D004141 1.5e-23 114.8 86 61.6
BcaB04g20431 Brassica carinata HOM05D000595 ORTHO05D004141 1.2e-22 111.7 74 67.6
SGA_v2.0_scaffold89G27418 Striga asiatica HOM05D000595 ORTHO05D004141 8.0e-22 109.0 91 56.0
Mapoly0059s0108 Marchantia polymorpha HOM05D000595 ORTHO05D004141 6.8e-21 105.9 108 46.3
vmacro13036 Vaccinium macrocarpon HOM05D000595 ORTHO05D426933 3.4e-20 103.6 92 62.0
Oeu042205.1 Olea europaea HOM05D000595 ORTHO05D004141 9.8e-20 102.1 81 61.7
Oeu042203.1 Olea europaea HOM05D000595 ORTHO05D004141 1.3e-16 91.7 70 62.9
AagrBONN_evm.TU.Sc2ySwM_228.2586 Anthoceros agrestis HOM05D000595 ORTHO05D004141 1.1e-13 82.0 86 44.2
Cc08_g05410 Coffea canephora HOM05D000595 ORTHO05D004141 4.0e-13 80.1 81 50.6
Oeu042230.1 Olea europaea HOM05D000595 ORTHO05D004141 1.7e-08 64.7 34 82.4


User provided reference genes

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