Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 0.0e+00 1115.1 554 100.0
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 3.2e-208 728.8 559 68.3
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.6e-199 699.9 552 65.2
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.6e-188 663.3 471 70.9
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 1.4e-187 660.2 544 64.0
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.8e-187 659.8 522 64.9
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 1.5e-186 656.8 556 63.5
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 2.0e-186 656.4 491 66.2
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 6.4e-185 651.4 543 61.1
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 6.0e-183 644.8 477 66.9
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 7.3e-181 637.9 532 61.3
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.6e-180 636.7 424 72.6
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 1.4e-179 633.6 494 62.8
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 1.8e-179 633.3 521 61.6
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 4.0e-179 632.1 539 60.3
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 5.3e-179 631.7 548 61.3
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 9.0e-179 630.9 492 62.4
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 2.6e-178 629.4 511 61.4
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 3.4e-178 629.0 521 61.6
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 7.6e-178 627.9 520 61.3
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 4.2e-176 622.1 525 60.8
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 5.4e-176 621.7 526 61.6
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 9.3e-176 620.9 543 60.6
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 1.2e-175 620.5 480 63.5
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 3.5e-175 619.0 525 60.8
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 4.6e-175 618.6 523 61.0
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 7.8e-175 617.8 478 61.9
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 1.3e-174 617.1 523 59.5
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 8.7e-174 614.4 520 59.8
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 7.3e-173 611.3 526 60.1
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 4.8e-172 608.6 557 56.4
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 3.1e-171 605.9 549 58.1
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 2.0e-170 603.2 484 63.6
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 3.4e-170 602.4 471 63.7
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 9.9e-170 600.9 498 60.4
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 1.3e-169 600.5 424 68.2
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.3e-169 600.5 482 63.3
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 3.8e-169 599.0 532 58.1
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 4.9e-169 598.6 484 62.4
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 8.4e-169 597.8 443 65.7
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.9e-168 596.7 551 59.0
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 7.1e-168 594.7 467 62.5
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 2.1e-167 593.2 541 57.7
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 3.5e-167 592.4 457 63.2
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 3.5e-167 592.4 474 62.0
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 1.3e-166 590.5 529 57.1
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 1.3e-166 590.5 487 58.7
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 6.7e-166 588.2 453 63.4
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 2.5e-165 586.3 467 62.1
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 9.6e-165 584.3 483 59.4
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 9.6e-165 584.3 435 66.0
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 3.7e-164 582.4 479 60.1
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 4.8e-164 582.0 518 57.1
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.1e-163 580.9 417 66.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 2.4e-163 579.7 421 66.0
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 3.1e-163 579.3 576 53.5
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 4.0e-163 578.9 565 54.3
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 4.0e-163 578.9 494 57.7
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 6.9e-163 578.2 465 60.0
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 6.9e-163 578.2 494 57.5
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 5.8e-162 575.1 421 65.3
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 9.9e-162 574.3 454 60.6
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 3.2e-160 569.3 465 60.0
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 1.3e-158 563.9 462 60.0
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 3.9e-158 562.4 476 58.6
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 6.7e-158 561.6 412 65.0
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 6.7e-158 561.6 469 59.1
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 1.9e-157 560.1 475 59.4
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 5.6e-157 558.5 478 57.9
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 9.6e-157 557.8 469 59.3
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 6.2e-156 555.1 457 59.1
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 2.4e-155 553.1 475 57.3
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 5.3e-155 552.0 369 70.7
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 1.2e-154 550.8 467 58.5
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 3.8e-153 545.8 469 58.0
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.9e-152 543.5 414 59.2
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 2.5e-152 543.1 469 57.8
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 4.2e-152 542.3 469 58.0
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 6.0e-151 538.5 454 59.0
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 8.7e-150 534.6 461 61.2
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 1.0e-145 521.2 470 55.5
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 3.7e-132 476.1 359 60.2
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 3.9e-126 456.1 294 71.1
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 1.7e-124 450.7 313 68.4
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 2.8e-124 449.9 397 52.4
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 2.4e-123 446.8 293 73.4
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 8.0e-119 431.8 554 46.8
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.6e-117 426.8 458 44.3
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 2.6e-117 426.8 444 48.6
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.4e-115 421.0 285 69.5
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 4.1e-115 419.5 386 50.8
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.4e-107 394.4 548 44.0
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 1.6e-106 391.0 273 68.1
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.7e-106 390.2 268 69.0
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 6.3e-100 369.0 456 44.3
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 9.5e-96 355.1 258 69.8
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 1.4e-91 341.3 225 71.1
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 5.4e-91 339.3 231 69.3
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 4.6e-90 336.3 365 46.3
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 3.9e-89 333.2 392 43.1
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 3.6e-87 326.6 231 65.4
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.0e-85 320.9 243 67.9
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 5.6e-72 276.2 168 78.0
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.3e-68 265.0 231 55.4
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 3.2e-67 260.4 542 33.6
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.3e-57 228.4 320 38.1
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 3.0e-49 200.7 238 48.7
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 1.9e-48 198.0 175 56.6
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 1.3e-47 195.3 186 55.4
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.1e-46 192.2 303 33.7
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 3.5e-42 177.2 228 46.9
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 3.0e-41 174.1 219 46.1
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 3.9e-41 173.7 103 80.6
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 1.6e-39 168.3 483 27.7
GSVIVG01007571001 Vitis vinifera HOM05D002132 ORTHO05D002168 3.1e-38 164.1 88 94.3
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 8.4e-36 156.0 401 29.4
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 6.7e-33 146.4 104 70.2
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 5.3e-30 136.7 323 31.6
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 5.0e-28 130.2 91 70.3
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.7e-23 115.2 154 40.9
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 2.7e-18 97.8 98 49.0
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 4.4e-16 90.5 66 68.2
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 2.2e-15 88.2 63 60.3
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 2.7e-10 71.2 35 77.1
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.0e-10 69.7 55 58.2
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.5e-08 65.5 38 71.1


User provided reference genes

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