Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 3.6e-67 258.1 128 100.0
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 2.0e-57 225.7 127 85.8
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 4.9e-56 221.1 127 82.7
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 4.9e-56 221.1 127 84.3
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 6.5e-56 220.7 129 83.7
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 6.5e-56 220.7 126 84.9
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 6.5e-56 220.7 127 83.5
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 1.1e-55 219.9 127 85.0
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 1.4e-55 219.5 127 81.1
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 1.4e-55 219.5 127 85.0
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 1.4e-55 219.5 129 83.7
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 1.9e-55 219.2 123 85.4
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 3.2e-55 218.4 123 85.4
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 7.1e-55 217.2 128 78.1
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 9.3e-55 216.9 127 81.1
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 1.6e-54 216.1 129 82.2
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 2.1e-54 215.7 128 78.9
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 2.7e-54 215.3 128 82.0
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 2.7e-54 215.3 128 79.7
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 3.5e-54 214.9 127 81.9
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 4.6e-54 214.5 128 78.9
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 6.0e-54 214.2 128 77.3
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 6.0e-54 214.2 128 77.3
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 6.0e-54 214.2 127 82.7
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 7.9e-54 213.8 128 75.0
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 7.9e-54 213.8 128 75.0
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 1.0e-53 213.4 127 80.3
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 1.3e-53 213.0 127 81.1
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 1.3e-53 213.0 127 81.1
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 3.0e-53 211.8 128 74.2
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 3.9e-53 211.5 116 85.3
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 3.9e-53 211.5 116 85.3
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 5.1e-53 211.1 128 73.4
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 6.7e-53 210.7 127 76.4
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 8.7e-53 210.3 128 79.7
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 1.5e-52 209.5 127 81.1
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 1.9e-52 209.1 133 76.7
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 1.9e-52 209.1 124 79.8
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 3.3e-52 208.4 128 78.9
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 1.3e-51 206.5 127 78.0
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 1.6e-51 206.1 121 78.5
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 3.7e-51 204.9 128 75.0
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 1.4e-50 203.0 128 74.2
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.8e-50 202.6 121 77.7
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.8e-50 202.6 121 77.7
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 3.1e-50 201.8 127 75.6
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 9.0e-50 200.3 149 65.8
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 1.5e-49 199.5 143 69.9
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 2.0e-49 199.1 113 81.4
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 2.0e-49 199.1 126 74.6
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 4.5e-49 198.0 119 74.8
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 4.5e-49 198.0 119 74.8
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 4.5e-49 198.0 119 74.8
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 4.5e-49 198.0 119 74.8
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 4.5e-49 198.0 120 76.7
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 4.5e-49 198.0 120 76.7
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 1.0e-48 196.8 119 74.8
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 1.3e-48 196.4 119 74.8
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 1.7e-48 196.1 119 74.8
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 2.2e-48 195.7 126 75.4
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 3.8e-48 194.9 120 77.5
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 6.5e-48 194.1 119 73.9
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 6.5e-48 194.1 119 73.9
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 6.5e-48 194.1 119 73.9
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 6.5e-48 194.1 128 72.7
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 6.5e-48 194.1 127 75.6
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 8.4e-48 193.7 119 73.1
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 1.1e-47 193.4 118 79.7
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 1.1e-47 193.4 114 76.3
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 1.1e-47 193.4 124 74.2
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 1.4e-47 193.0 121 72.7
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 1.4e-47 193.0 113 77.9
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 1.9e-47 192.6 116 76.7
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 1.9e-47 192.6 116 75.9
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 1.9e-47 192.6 118 80.5
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 2.5e-47 192.2 128 73.4
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 2.5e-47 192.2 128 73.4
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 3.2e-47 191.8 128 72.7
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 3.2e-47 191.8 128 72.7
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 3.2e-47 191.8 127 71.7
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 4.2e-47 191.4 125 72.0
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 4.2e-47 191.4 119 77.3
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 5.5e-47 191.0 118 76.3
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 5.5e-47 191.0 113 78.8
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 9.3e-47 190.3 113 77.0
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 2.1e-46 189.1 141 65.2
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 2.1e-46 189.1 117 76.9
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 4.6e-46 188.0 128 71.1
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 6.1e-46 187.6 118 77.1
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 7.9e-46 187.2 124 75.0
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 7.9e-46 187.2 119 77.3
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 7.9e-46 187.2 115 76.5
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 1.0e-45 186.8 147 64.6
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 1.3e-45 186.4 119 73.1
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 1.3e-45 186.4 119 77.3
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 5.1e-45 184.5 125 69.6
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 6.7e-45 184.1 125 70.4
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 6.7e-45 184.1 127 70.1
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 6.7e-45 184.1 113 77.9
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 2.5e-44 182.2 127 70.9
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 3.3e-44 181.8 127 70.1
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 3.3e-44 181.8 114 74.6
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 3.7e-43 178.3 115 74.8
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 1.8e-42 176.0 116 73.3
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 4.1e-42 174.9 119 71.4
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 5.9e-41 171.0 126 67.5
CDE02G1314 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 5.5e-31 137.9 88 79.5
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 4.4e-28 128.3 73 79.5
Sp5g34440 Schrenkiella parvula HOM05D005454 ORTHO05D006781 1.7e-27 126.3 76 77.6
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 8.2e-27 124.0 112 53.6
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 4.1e-26 121.7 112 53.6
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 5.3e-26 121.3 67 82.1
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 5.3e-26 121.3 112 53.6
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 1.2e-25 120.2 72 72.2
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 1.3e-24 116.7 68 75.0
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 1.3e-24 116.7 68 77.9
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 1.3e-24 116.7 77 70.1
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 1.3e-24 116.7 75 72.0
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 1.7e-24 116.3 68 73.5
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 1.7e-24 116.3 67 76.1
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 4.7e-22 108.2 68 67.6
Cfa017757 Carpinus fangiana HOM05D005454 ORTHO05D006781 8.8e-21 104.0 59 93.2
CBR_g2846 Chara braunii HOM05D005454 ORTHO05D006781 2.6e-20 102.4 114 44.7
CDE04G2596 Ceratophyllum demersum HOM05D005454 ORTHO05D006781 1.1e-18 97.1 71 66.2
Atru.chr1.31 Acer truncatum HOM05D005454 ORTHO05D006781 1.8e-18 96.3 81 64.2
Actinidia03633 Actinidia chinensis HOM05D005454 ORTHO05D012925 3.1e-18 95.5 61 77.0
QL04p094659 Quercus lobata HOM05D005454 ORTHO05D006781 5.3e-18 94.7 60 81.7
CARHR073050 Cardamine hirsuta HOM05D005454 ORTHO05D006781 1.2e-17 93.6 52 84.6
Potri.010G174700 Populus trichocarpa HOM05D005454 ORTHO05D006781 1.2e-17 93.6 59 83.1
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 2.0e-17 92.8 58 69.0
Gohir.A04G138000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 7.7e-17 90.9 57 78.9
BolC8t48807H Brassica oleracea HOM05D005454 ORTHO05D006781 2.9e-16 89.0 52 78.8
DCAR_013713 Daucus carota HOM05D005454 ORTHO05D006781 1.2e-14 83.6 108 42.6
Cc00_g28770 Coffea canephora HOM05D001769 ORTHO05D001695 2.1e-14 82.8 63 65.1
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 3.6e-14 82.0 75 53.3
SMO367G0923 Selaginella moellendorffii HOM05D005454 ORTHO05D006781 4.4e-12 75.1 125 36.8
C06p00690 Brassica napus HOM05D005454 ORTHO05D006781 5.7e-12 74.7 76 52.6
BcaC08g42854 Brassica carinata HOM05D005454 ORTHO05D006781 1.3e-11 73.6 44 75.0
BolC6t35206H Brassica oleracea HOM05D005454 ORTHO05D006781 1.3e-11 73.6 44 75.0
C03p71170 Brassica napus HOM05D005454 ORTHO05D006781 1.7e-11 73.2 76 51.3
SGA_v2.0_scaffold29G12256 Striga asiatica HOM05D005454 ORTHO05D006781 7.7e-09 64.3 45 62.2


User provided reference genes

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