Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 0.0e+00 1370.9 694 100.0
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 1.2e-164 584.3 912 43.2
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 7.6e-151 538.5 954 40.7
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 3.0e-147 526.6 863 42.2
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 5.1e-147 525.8 909 40.8
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 6.6e-147 525.4 787 44.3
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 6.6e-147 525.4 884 41.2
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 8.7e-147 525.0 813 43.5
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 4.0e-144 516.2 868 41.9
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 5.3e-144 515.8 735 46.5
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 1.3e-142 511.1 874 41.0
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 2.4e-141 506.9 862 41.5
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 4.2e-141 506.1 900 39.2
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 6.4e-134 482.3 828 42.0
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 1.8e-131 474.2 853 41.6
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 3.0e-131 473.4 840 42.0
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 7.4e-130 468.8 888 38.9
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.0e-126 458.4 843 41.5
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 6.5e-126 455.7 874 38.8
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 7.9e-124 448.7 837 40.3
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 3.4e-119 433.3 880 38.4
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.1e-117 428.3 841 37.3
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 1.2e-116 424.9 841 38.2
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 3.3e-114 416.8 871 35.9
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 5.3e-112 409.5 908 35.6
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 6.9e-112 409.1 889 36.0
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 4.5e-111 406.4 908 35.5
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 5.9e-111 406.0 779 38.0
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 1.3e-110 404.8 735 40.1
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 6.5e-110 402.5 872 36.0
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 1.4e-109 401.4 830 37.1
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 5.5e-109 399.4 898 36.1
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 9.4e-109 398.7 840 36.9
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 2.7e-108 397.1 904 36.9
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 6.1e-108 396.0 854 35.9
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.0e-107 395.2 931 33.6
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 6.7e-107 392.5 859 36.2
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 6.7e-107 392.5 906 35.8
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 4.8e-105 386.3 967 33.9
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 5.3e-104 382.9 855 35.6
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 3.4e-103 380.2 907 34.4
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 7.7e-103 379.0 855 35.0
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.0e-102 378.6 905 34.0
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 5.0e-102 376.3 847 35.1
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 6.5e-102 375.9 928 34.2
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 6.5e-102 375.9 866 35.2
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 8.5e-102 375.6 884 33.5
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 1.1e-101 375.2 879 34.7
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 1.9e-101 374.4 833 36.1
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 4.7e-100 369.8 736 36.8
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 1.1e-98 365.2 770 35.6
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 2.6e-98 364.0 874 32.8
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 5.7e-98 362.8 956 32.6
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 9.1e-96 355.5 836 34.8
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.5e-93 348.2 381 49.1
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 5.5e-93 346.3 694 36.5
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 8.8e-91 339.0 1074 29.9
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 6.3e-89 332.8 937 32.4
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 1.1e-88 332.0 840 33.0
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 5.3e-88 329.7 730 35.6
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 6.5e-86 322.8 895 32.3
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 1.5e-85 321.6 371 47.2
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 1.2e-82 312.0 352 49.1
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 2.8e-81 307.4 751 34.1
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 6.3e-81 306.2 572 37.4
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 5.0e-78 296.6 836 31.6
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 7.5e-74 282.7 1030 29.7
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 2.8e-73 280.8 758 32.8
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 2.6e-66 257.7 714 33.8
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 4.6e-63 246.9 574 34.0
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 1.7e-62 245.0 292 48.3
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 4.3e-61 240.4 706 32.0
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 3.9e-54 217.2 657 32.1
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 8.6e-54 216.1 673 29.9
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 3.3e-53 214.2 181 59.1
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 6.4e-49 199.9 732 29.6
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 7.6e-42 176.4 778 26.3
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 2.2e-41 174.9 476 33.0
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.9e-41 174.5 772 27.7
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.4e-40 171.4 774 27.3
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 7.8e-39 166.4 586 30.9
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.5e-37 161.4 137 54.0
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 1.3e-33 149.1 145 53.1
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 1.1e-29 136.0 109 64.2
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 1.4e-24 119.0 90 71.1
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.4e-19 102.4 143 50.3
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 2.1e-15 88.6 149 35.6
COL.COLO4_04921 Corchorus olitorius HOM05D007594 ORTHO05D009607 7.4e-13 80.1 61 68.9
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 2.1e-12 78.6 67 59.7
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.8e-11 75.5 54 72.2
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 9.0e-11 73.2 57 61.4
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 2.6e-10 71.6 97 49.5
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 2.6e-10 71.6 75 42.7
CBR_g49793 Chara braunii HOM05D000019 ORTHO05D000048 8.4e-09 66.6 107 35.5


User provided reference genes

Program Settings