Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036487001 Vitis vinifera HOM05D005209 ORTHO05D439103 5.9e-12 72.8 35 100.0
Migut.B00873 Erythranthe guttata HOM05D005209 ORTHO05D006188 7.5e-07 55.8 31 83.9
GSVIVG01036485001 Vitis vinifera HOM05D005209 ORTHO05D006188 9.8e-07 55.5 30 86.7
SalBow5G4773 Salvia bowleyana HOM05D005209 ORTHO05D006188 1.3e-06 55.1 31 80.6
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 1.7e-06 54.7 31 80.6
Actinidia17624 Actinidia chinensis HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
MSTRG.16420 Avicennia marina HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
CSS0008299 Camellia sinensis var. sinensis HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
CSS0033996 Camellia sinensis var. sinensis HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
CANSAT64G0740 Cannabis sativa HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Cfa007992 Carpinus fangiana HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Haze_14094 Corylus avellana HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Dinv33899 Davidia involucrata HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Nn3g17615 Nelumbo nucifera HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Oeu061923.1 Olea europaea HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
PSO017G0176 Papaver somniferum HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
PSO478G2513 Papaver somniferum HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Pp3c5_10620 Physcomitrium patens HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
PGR004G1897 Punica granatum HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
QL06p007181 Quercus lobata HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Rhsim08G0080900 Rhododendron simsii HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
SMO358G0703 Selaginella moellendorffii HOM05D005209 ORTHO05D006188 2.2e-06 54.3 31 80.6
TWI34G0252 Tripterygium wilfordii HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
TAR374G0982 Trochodendron aralioides HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
vmacro18093 Vaccinium macrocarpon HOM05D005209 ORTHO05D006188 2.2e-06 54.3 30 83.3
Atru.chr8.744 Acer truncatum HOM05D005209 ORTHO05D006188 2.9e-06 53.9 31 80.6
Dinv34876 Davidia involucrata HOM05D005209 ORTHO05D006188 3.7e-06 53.5 29 86.2
MD09G1080000 Malus domestica HOM05D005209 ORTHO05D006188 3.7e-06 53.5 31 80.6
Ciclev10011814m.g Citrus clementina HOM05D005209 ORTHO05D006188 4.9e-06 53.1 30 83.3
Lj4A128G72 Lonicera japonica HOM05D005209 ORTHO05D006188 4.9e-06 53.1 30 80.0
Lju237A1T74 Lonicera japonica HOM05D005209 ORTHO05D006188 4.9e-06 53.1 30 80.0
arahy.Tifrunner.gnm1.ann1.M8ZBV6 Arachis hypogaea HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
arahy.Tifrunner.gnm1.ann1.TP5H97 Arachis hypogaea HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
CiPaw.04G044000 Carya illinoinensis HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
Ca_26512_v3 Cicer arietinum L. HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
ClCG04G009000 Citrullus lanatus HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
MELO3C014242.2 Cucumis melo HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
CsaV3_6G039510 Cucumis sativus L. HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
Glyma.13G049900 Glycine max HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
Glyma.19G040100 Glycine max HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
Mapoly0019s0033 Marchantia polymorpha HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
Medtr6g016590 Medicago truncatula HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
Psat1g063840 Pisum sativum HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
Sed0011768 Sechium edule HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
SEGI_00163 Sequoiadendron giganteum HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 83.3
TPR.G27151 Trifolium pratense HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
VMungo0464G1508 Vigna mungo HOM05D005209 ORTHO05D006188 6.4e-06 52.8 30 80.0
DCAR_007532 Daucus carota HOM05D005209 ORTHO05D006188 8.3e-06 52.4 30 80.0


User provided reference genes

Program Settings