Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036482001 Vitis vinifera HOM05D002873 ORTHO05D002978 2.7e-21 104.8 66 100.0
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 6.1e-10 67.0 65 66.2
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 8.0e-10 66.6 66 51.5
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 1.0e-09 66.2 65 53.8
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 1.4e-09 65.9 63 66.7
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.0e-09 64.3 65 67.7
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.0e-09 64.3 64 68.8
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 6.8e-09 63.5 64 51.6
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 8.9e-09 63.2 64 68.8
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 8.9e-09 63.2 63 60.3
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 1.5e-08 62.4 66 51.5
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 1.5e-08 62.4 66 51.5
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.5e-08 62.4 65 49.2
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.5e-08 62.4 65 64.6
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 2.0e-08 62.0 65 52.3
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 2.0e-08 62.0 65 52.3
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 2.0e-08 62.0 65 55.4
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.6e-08 61.6 65 49.2
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 3.4e-08 61.2 65 49.2
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 3.4e-08 61.2 65 52.3
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 3.4e-08 61.2 65 52.3
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 3.4e-08 61.2 64 51.6
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 66.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 7.5e-08 60.1 65 52.3
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 7.5e-08 60.1 71 50.7
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 7.5e-08 60.1 64 51.6
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 9.8e-08 59.7 65 50.8
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 9.8e-08 59.7 65 50.8
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.3e-07 59.3 65 63.1
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 1.3e-07 59.3 65 50.8
Ca_20748_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 2.2e-07 58.5 66 63.6
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 2.2e-07 58.5 65 60.0
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 2.9e-07 58.2 60 51.7
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 2.9e-07 58.2 64 50.0
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.9e-07 58.2 65 53.8
HanXRQChr14g0448071 Helianthus annuus HOM05D002873 ORTHO05D002978 3.7e-07 57.8 66 48.5
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 4.9e-07 57.4 65 46.2
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 4.9e-07 57.4 65 46.2
Hma1.2p1_0588F.1_g184450 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 4.9e-07 57.4 60 66.7
Potri.004G106350 Populus trichocarpa HOM05D002873 ORTHO05D002978 6.4e-07 57.0 66 59.1
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 8.3e-07 56.6 64 46.9
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 8.3e-07 56.6 64 46.9
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 8.3e-07 56.6 64 46.9
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 8.3e-07 56.6 65 61.5
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 8.3e-07 56.6 64 62.5
Cpa.g.sc188.25 Carica papaya HOM05D002873 ORTHO05D002978 1.1e-06 56.2 63 61.9
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.4e-06 55.8 65 44.6
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.4e-06 55.8 65 44.6
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.4e-06 55.8 65 44.6
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 56.7
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 1.9e-06 55.5 64 45.3
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 1.9e-06 55.5 64 45.3
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 1.9e-06 55.5 64 45.3
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 1.9e-06 55.5 64 45.3
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 2.4e-06 55.1 65 47.7
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 2.4e-06 55.1 64 48.4
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 2.4e-06 55.1 65 61.5
Hund13793 Selenicereus undatus HOM05D002873 ORTHO05D002978 3.2e-06 54.7 60 53.3
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 4.1e-06 54.3 64 43.8
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 4.1e-06 54.3 64 51.6
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 4.1e-06 54.3 65 58.5
Glyma.18G278600 Glycine max HOM05D002873 ORTHO05D002978 5.4e-06 53.9 65 53.8
Phvul.004G047300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 5.4e-06 53.9 64 45.3
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 5.4e-06 53.9 64 46.9
Carub.0008s1411 Capsella rubella HOM05D002873 ORTHO05D002978 7.0e-06 53.5 65 58.5
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 7.0e-06 53.5 65 43.1
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 7.0e-06 53.5 65 63.1
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 9.2e-06 53.1 66 47.0


User provided reference genes

Program Settings