Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 3.1e-105 385.2 198 100.0
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.5e-56 223.4 197 61.4
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 2.6e-56 222.6 197 61.4
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 1.4e-54 216.9 193 63.7
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 1.9e-54 216.5 196 58.7
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 4.2e-54 215.3 197 55.8
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.6e-53 213.4 190 57.9
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 6.1e-53 211.5 188 62.8
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 7.9e-53 211.1 192 58.3
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 1.0e-52 210.7 186 60.2
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.3e-52 209.5 186 60.8
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 3.9e-52 208.8 175 63.4
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 8.7e-52 207.6 186 59.7
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 3.3e-51 205.7 197 54.3
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 9.7e-51 204.1 235 49.4
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 3.7e-50 202.2 198 57.6
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 1.1e-49 200.7 198 52.0
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.1e-49 200.7 171 61.4
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 1.4e-49 200.3 217 54.8
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 6.9e-49 198.0 198 52.0
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 9.0e-49 197.6 190 56.8
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.5e-48 196.8 197 55.3
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.5e-48 196.8 198 55.1
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 3.4e-48 195.7 199 52.3
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 4.5e-48 195.3 190 54.2
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 7.7e-48 194.5 198 54.0
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 1.0e-47 194.1 197 54.8
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 1.4e-46 190.3 189 52.4
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.4e-46 190.3 180 58.3
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.4e-46 190.3 199 53.3
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 1.9e-46 189.9 193 51.8
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 2.5e-46 189.5 200 51.0
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 5.5e-46 188.3 200 49.5
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 2.7e-45 186.0 198 51.0
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 2.7e-45 186.0 198 55.6
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.0e-44 184.1 199 52.8
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 2.3e-44 183.0 200 49.5
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 3.9e-44 182.2 191 53.4
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.1e-43 180.6 188 51.1
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.5e-43 180.3 189 49.7
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 2.5e-43 179.5 205 51.2
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 2.5e-43 179.5 199 47.7
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 5.7e-43 178.3 197 53.3
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 7.4e-43 177.9 181 54.7
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 9.7e-43 177.6 192 50.5
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 3.7e-42 175.6 191 53.9
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 3.7e-42 175.6 197 48.2
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 4.8e-42 175.3 200 45.5
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 6.3e-42 174.9 210 50.0
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 8.2e-42 174.5 190 51.1
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 1.1e-41 174.1 198 48.5
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.1e-41 174.1 190 51.1
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 5.3e-41 171.8 188 52.1
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.3e-41 171.8 188 50.5
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 9.1e-41 171.0 185 54.6
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.5e-40 170.2 188 50.5
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.6e-40 169.5 197 53.8
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 2.6e-40 169.5 198 50.5
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.7e-39 166.8 190 47.9
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 1.7e-39 166.8 193 50.8
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.4e-38 163.7 187 48.1
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.4e-38 163.7 198 48.5
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.8e-36 156.8 146 58.2
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 3.0e-36 156.0 196 46.4
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 6.7e-36 154.8 174 50.6
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 1.1e-33 147.5 151 55.0
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 4.1e-33 145.6 173 45.7
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 9.1e-33 144.4 161 49.7
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 5.9e-32 141.7 182 48.4
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.3e-31 140.6 215 42.3
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 1.7e-31 140.2 173 45.1
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 6.5e-31 138.3 171 45.6
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.2e-30 135.6 158 51.3
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 5.2e-28 128.6 190 42.1
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 2.0e-27 126.7 116 58.6
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 3.3e-27 125.9 172 41.9
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.7e-26 123.6 183 41.5
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 6.3e-26 121.7 171 43.9
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 8.2e-26 121.3 153 45.1
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 2.7e-24 116.3 99 59.6
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.3e-23 114.0 119 56.3
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.7e-23 113.6 101 59.4
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.5e-22 110.5 202 35.6
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 3.0e-20 102.8 143 40.6
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 6.3e-18 95.1 207 34.3
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.1e-17 94.4 156 39.1
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 3.1e-17 92.8 109 45.9
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 7.0e-17 91.7 80 57.5
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.0e-16 90.1 67 71.6
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 8.5e-15 84.7 126 40.5
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 3.2e-14 82.8 120 46.7
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 2.1e-13 80.1 133 36.1
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 8.3e-10 68.2 210 27.1
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 2.4e-09 66.6 172 29.1
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 3.5e-08 62.8 160 31.2
HPP92_009695 Vanilla planifolia HOM05D007356 ORTHO05D009247 2.3e-07 60.1 92 43.5


User provided reference genes

Program Settings