Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.9e-156 555.8 281 100.0
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 9.0e-119 430.6 292 78.8
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.0e-114 417.2 275 77.1
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.3e-114 416.8 237 86.1
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.3e-114 416.8 269 77.0
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 6.7e-114 414.5 291 73.9
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.9e-113 412.9 287 73.5
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 7.4e-113 411.0 259 78.8
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 7.4e-113 411.0 237 83.5
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 2.1e-112 409.5 290 74.5
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 4.8e-112 408.3 283 74.9
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 4.8e-112 408.3 237 83.1
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 6.3e-112 407.9 274 77.7
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 6.3e-112 407.9 295 72.9
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 6.3e-112 407.9 285 74.7
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 6.3e-112 407.9 271 77.5
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 1.1e-111 407.1 276 76.1
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.1e-111 407.1 236 83.1
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.8e-111 406.4 289 74.0
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.8e-111 406.4 286 73.4
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 2.4e-111 406.0 283 74.2
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 4.1e-111 405.2 304 71.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.2e-110 403.7 289 73.7
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.5e-110 403.3 280 75.0
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 3.4e-110 402.1 283 73.5
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 4.5e-110 401.7 264 76.5
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.5e-110 401.7 270 76.7
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 4.5e-110 401.7 234 82.5
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 7.6e-110 401.0 282 73.4
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.3e-109 400.2 287 73.5
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 1.3e-109 400.2 281 73.7
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.3e-109 400.2 299 72.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.7e-109 399.8 271 74.9
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 2.9e-109 399.1 273 75.1
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.4e-108 396.7 285 73.7
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.9e-108 396.4 235 81.3
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.5e-108 396.0 288 72.2
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 3.2e-108 395.6 237 80.6
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.2e-108 395.6 287 70.7
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 5.5e-108 394.8 278 73.0
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 5.5e-108 394.8 285 71.6
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 5.5e-108 394.8 263 77.6
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 9.3e-108 394.0 290 73.1
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 9.3e-108 394.0 281 71.5
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 2.1e-107 392.9 263 76.4
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.1e-107 392.9 279 71.7
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 2.7e-107 392.5 267 73.4
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 4.6e-107 391.7 268 74.3
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 7.9e-107 391.0 227 83.7
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 2.3e-106 389.4 287 71.4
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 2.3e-106 389.4 282 70.9
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 3.9e-106 388.7 274 73.0
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.1e-105 387.1 280 71.1
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 1.9e-105 386.3 281 73.3
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.5e-105 386.0 253 76.3
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 4.3e-105 385.2 281 73.0
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 7.4e-105 384.4 282 70.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 4.8e-104 381.7 286 71.7
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 6.3e-104 381.3 291 71.1
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 8.2e-104 380.9 274 70.4
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.1e-103 380.6 288 69.4
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.1e-103 380.6 288 69.4
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 1.4e-103 380.2 262 75.6
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 1.8e-103 379.8 263 75.3
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 3.1e-103 379.0 292 69.9
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 3.1e-103 379.0 251 76.5
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 4.1e-103 378.6 296 68.2
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 4.1e-103 378.6 288 68.1
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 4.1e-103 378.6 287 68.3
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.5e-102 376.7 282 69.1
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.5e-102 376.7 293 70.0
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 2.0e-102 376.3 283 68.9
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 2.0e-102 376.3 299 66.2
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.0e-102 376.3 293 69.3
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 2.6e-102 375.9 292 69.9
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 4.5e-102 375.2 292 68.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 4.5e-102 375.2 292 68.2
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 5.9e-102 374.8 310 63.9
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 7.7e-102 374.4 279 68.5
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 7.7e-102 374.4 339 62.2
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.0e-101 374.0 237 76.4
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.3e-101 373.6 236 78.0
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.3e-101 373.6 209 84.7
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 1.3e-101 373.6 252 72.6
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.2e-100 369.0 278 70.1
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.2e-100 369.0 281 70.1
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 3.2e-100 369.0 280 69.6
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.2e-100 368.6 274 70.8
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 7.2e-100 367.9 281 68.7
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 7.2e-100 367.9 290 66.9
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 9.4e-100 367.5 285 67.7
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 9.4e-100 367.5 281 69.8
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 9.4e-100 367.5 288 66.0
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 2.1e-99 366.3 234 76.9
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 8.8e-98 360.9 240 74.6
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.7e-96 356.7 249 73.1
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.9e-93 345.9 243 69.1
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 1.4e-90 337.0 291 61.5
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.3e-82 309.7 293 59.7
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 4.0e-82 308.9 229 67.7
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 1.0e-77 294.3 255 56.9
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.5e-76 288.5 193 73.1
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 2.1e-75 286.6 248 58.1
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.5e-73 280.4 214 68.7
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 2.2e-72 276.6 214 69.2
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 3.7e-72 275.8 202 64.9
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.4e-66 257.3 205 60.5
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.2e-66 255.4 214 65.0
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 9.9e-41 171.4 95 95.8
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.3e-40 171.0 290 39.0
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.6e-38 164.1 170 54.7
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 4.6e-38 162.5 92 90.2
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 5.2e-34 149.1 219 40.2
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 2.2e-32 143.7 174 46.0
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 6.4e-32 142.1 94 77.7
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.1e-31 141.4 225 36.9
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.1e-26 124.8 87 71.3
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 7.6e-25 118.6 131 45.8
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.2e-08 63.9 80 43.8
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 2.1e-06 57.4 143 29.4


User provided reference genes

Program Settings