Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036118001 Vitis vinifera HOM05D002332 ORTHO05D028675 5.1e-93 344.4 170 100.0
Potri.015G093300 Populus trichocarpa HOM05D002332 ORTHO05D002509 2.6e-28 129.4 226 39.8
GSVIVG01008512001 Vitis vinifera HOM05D002332 ORTHO05D028675 9.9e-28 127.5 77 88.3
Rhsim08G0188500 Rhododendron simsii HOM05D002332 ORTHO05D002509 1.7e-27 126.7 209 42.1
QL10p004201 Quercus lobata HOM05D002332 ORTHO05D002509 2.2e-27 126.3 219 40.6
QL10p004138 Quercus lobata HOM05D002332 ORTHO05D002509 2.9e-27 125.9 219 40.6
Cfa018843 Carpinus fangiana HOM05D002332 ORTHO05D002509 1.2e-25 120.6 222 37.8
Haze_07236 Corylus avellana HOM05D002332 ORTHO05D002509 2.7e-25 119.4 234 36.3
TWI39G1032 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 2.7e-25 119.4 226 36.7
Manes.14G052901 Manihot esculenta HOM05D002332 ORTHO05D002509 1.7e-24 116.7 221 40.7
TAR629G2976 Trochodendron aralioides HOM05D002332 ORTHO05D002509 6.6e-24 114.8 193 43.0
Prupe.5G153000 Prunus persica HOM05D002332 ORTHO05D002509 2.1e-22 109.8 214 36.9
FAN08G0156 Fragaria x ananassa HOM05D002332 ORTHO05D002509 1.8e-21 106.7 210 35.2
Thecc.03G126600 Theobroma cacao HOM05D002332 ORTHO05D002509 4.0e-21 105.5 218 36.2
FvH4_5g07940 Fragaria vesca HOM05D002332 ORTHO05D002509 5.2e-21 105.1 221 33.9
FAN18G1292 Fragaria x ananassa HOM05D002332 ORTHO05D002509 6.9e-21 104.8 212 33.5
DCAR_016406 Daucus carota HOM05D002332 ORTHO05D002509 1.2e-20 104.0 207 33.8
PSO782G4442 Papaver somniferum HOM05D002332 ORTHO05D002509 1.2e-20 104.0 226 34.5
FAN13G0819 Fragaria x ananassa HOM05D002332 ORTHO05D002509 2.0e-20 103.2 210 34.8
MD06G1143900 Malus domestica HOM05D002332 ORTHO05D002509 3.4e-20 102.4 203 36.0
Duzib084G0667 Durio zibethinus HOM05D002332 ORTHO05D002509 4.4e-20 102.1 204 35.3
COL.COLO4_28084 Corchorus olitorius HOM05D002332 ORTHO05D002509 5.8e-20 101.7 214 34.1
MBI08_g34939_MAGBIO Magnolia biondii HOM05D002332 ORTHO05D002509 5.8e-20 101.7 203 37.4
Nn4g22378 Nelumbo nucifera HOM05D002332 ORTHO05D002509 1.3e-19 100.5 194 38.7
Actinidia15835 Actinidia chinensis HOM05D002332 ORTHO05D002509 1.9e-18 96.7 178 37.1
PSO063G0438 Papaver somniferum HOM05D002332 ORTHO05D002509 5.4e-18 95.1 226 33.2
Ciclev10019919m.g Citrus clementina HOM05D002332 ORTHO05D002509 2.1e-17 93.2 203 36.0
Gohir.D03G113300 Gossypium hirsutum HOM05D002332 ORTHO05D002509 2.1e-17 93.2 223 33.2
Gorai.003G119500 Gossypium raimondii HOM05D002332 ORTHO05D002509 2.1e-17 93.2 223 33.2
Aqoxy3G04079 Aquilegia oxysepala HOM05D002332 ORTHO05D002509 2.7e-17 92.8 227 32.6
Lsat_1_v5_gn_4_76681 Lactuca sativa HOM05D002332 ORTHO05D002509 3.5e-17 92.4 214 35.0
THA.LOC104811594 Tarenaya hassleriana HOM05D002332 ORTHO05D002509 1.0e-16 90.9 152 38.2
ATR0686G098 Amborella trichopoda HOM05D002332 ORTHO05D002509 8.7e-16 87.8 207 34.3
Lj4g0022393 Lotus japonicus HOM05D002332 ORTHO05D002509 8.7e-16 87.8 218 31.2
ClCG03G003660 Citrullus lanatus HOM05D003220 ORTHO05D003944 2.8e-14 82.8 194 27.8
vmacro19215 Vaccinium macrocarpon HOM05D002332 ORTHO05D002509 3.6e-14 82.4 178 32.0
CANSAT80G0591 Cannabis sativa HOM05D002332 ORTHO05D002509 1.4e-13 80.5 203 31.0
Medtr4g103760 Medicago truncatula HOM05D002332 ORTHO05D002509 1.8e-13 80.1 211 30.8
Sabra15G0114900 Salix brachista HOM05D002332 ORTHO05D002509 3.1e-13 79.3 161 36.6
Sed0011561 Sechium edule HOM05D002332 ORTHO05D002509 4.0e-13 79.0 179 30.2
CiPaw.11G009300 Carya illinoinensis HOM05D002332 ORTHO05D028675 5.3e-13 78.6 76 57.9
CsaV3_1G009550 Cucumis sativus L. HOM05D002332 ORTHO05D002509 5.3e-13 78.6 204 30.4
Phvul.003G209700 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 3.4e-12 75.9 202 29.7
HanXRQChr09g0273051 Helianthus annuus HOM05D002332 ORTHO05D002509 5.4e-10 68.6 68 50.0
RcHm_v2.0_Chr7g0190461 Rosa chinensis HOM05D002332 ORTHO05D002509 7.1e-10 68.2 66 48.5
MD14G1159200 Malus domestica HOM05D002332 ORTHO05D002509 9.3e-10 67.8 52 55.8
Glyma.05G046600 Glycine max HOM05D002332 ORTHO05D002509 1.2e-09 67.4 226 28.8
Psat4g062600 Pisum sativum HOM05D002332 ORTHO05D002509 1.2e-09 67.4 229 26.2
Ca_00916_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 3.5e-09 65.9 66 47.0
ECA232G1214 Erigeron canadensis HOM05D002332 ORTHO05D002509 6.0e-09 65.1 63 50.8
SEGI_05634 Sequoiadendron giganteum HOM05D002332 ORTHO05D002509 1.9e-07 60.1 67 44.8
VMungo1215G0320 Vigna mungo HOM05D002332 ORTHO05D023718 4.3e-07 58.9 64 46.9


User provided reference genes

Program Settings