Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036092001 Vitis vinifera HOM05D001390 ORTHO05D018488 7.5e-60 234.2 170 100.0
GSVIVG01023693001 Vitis vinifera HOM05D001390 ORTHO05D001522 8.4e-19 97.8 46 97.8
Nitab4.5_0002809g0030 Nicotiana tabacum HOM05D001390 ORTHO05D001522 2.7e-17 92.8 44 97.7
Haze_15657 Corylus avellana HOM05D001390 ORTHO05D001522 6.0e-17 91.7 62 75.8
ClCG06G001240 Citrullus lanatus HOM05D001390 ORTHO05D001522 2.3e-16 89.7 67 70.1
Actinidia20939 Actinidia chinensis HOM05D001390 ORTHO05D001522 3.0e-16 89.4 43 97.7
Haze_19119 Corylus avellana HOM05D001390 ORTHO05D001522 3.0e-16 89.4 43 97.7
Haze_19123 Corylus avellana HOM05D001390 ORTHO05D001522 3.0e-16 89.4 43 97.7
DCAR_020092 Daucus carota HOM05D001390 ORTHO05D001522 3.0e-16 89.4 43 97.7
MBI15_g26071_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 3.0e-16 89.4 43 97.7
Peaxi162Scf00038g00731 Petunia axillaris HOM05D001390 ORTHO05D001522 3.0e-16 89.4 43 97.7
vmacro19014 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 3.0e-16 89.4 47 87.2
Nitab4.5_0003759g0040 Nicotiana tabacum HOM05D001390 ORTHO05D001522 1.1e-15 87.4 42 97.6
SalBow6G5231 Salvia bowleyana HOM05D001390 ORTHO05D001522 1.1e-15 87.4 42 97.6
MBI14_g16444_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 3.3e-15 85.9 41 97.6
A03p57700 Brassica napus HOM05D001390 ORTHO05D001522 4.3e-15 85.5 73 63.0
C07p55910 Brassica napus HOM05D001390 ORTHO05D001522 4.3e-15 85.5 73 63.0
Ah.01g020470 Amaranthus hybridus HOM05D001390 ORTHO05D001522 1.6e-14 83.6 44 86.4
CSS0022600 Camellia sinensis var. sinensis HOM05D001390 ORTHO05D001522 8.1e-14 81.3 38 100.0
DCAR_021354 Daucus carota HOM05D001390 ORTHO05D001522 2.4e-13 79.7 42 88.1
DCAR_016272 Daucus carota HOM05D001390 ORTHO05D001522 5.3e-13 78.6 55 70.9
Cfa003801 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.6e-12 76.3 35 100.0
DCAR_025251 Daucus carota HOM05D001390 ORTHO05D001522 2.6e-12 76.3 35 100.0
MBI06_g08471_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 2.6e-12 76.3 35 100.0
Ca_23537_v3 Cicer arietinum L. HOM05D001390 ORTHO05D001522 9.9e-12 74.3 34 100.0
Hma1.2p1_0017F.1_g011380 Hydrangea macrophylla HOM05D001390 ORTHO05D001522 9.9e-12 74.3 45 77.8
vmacro13159 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 9.9e-12 74.3 34 100.0
DCAR_005387 Daucus carota HOM05D001390 ORTHO05D001522 4.9e-11 72.0 34 97.1
RcHm_v2.0_Chr7g0224021 Rosa chinensis HOM05D001390 ORTHO05D001522 1.1e-10 70.9 32 100.0
SGA_v2.0_scaffold5G02720 Striga asiatica HOM05D001390 ORTHO05D001522 1.1e-10 70.9 35 91.4
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 3.2e-10 69.3 35 88.6
vmacro13048 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 4.2e-10 68.9 35 88.6
Cc02_g39330 Coffea canephora HOM05D001390 ORTHO05D001522 5.4e-10 68.6 31 100.0
TAR026G0002 Trochodendron aralioides HOM05D001390 ORTHO05D001522 5.4e-10 68.6 31 100.0
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.7e-09 66.2 30 100.0
TAR626G1668 Trochodendron aralioides HOM05D001390 ORTHO05D001522 2.7e-09 66.2 30 100.0
ECA170G0003 Erigeron canadensis HOM05D001390 ORTHO05D013105 1.0e-08 64.3 71 54.9
SGA_v2.0_scaffold8G04653 Striga asiatica HOM05D004922 ORTHO05D005990 3.3e-07 59.3 37 75.7
PSO339G0158 Papaver somniferum HOM05D003599 ORTHO05D004221 5.6e-07 58.5 44 59.1
MBI01_g15744_MAGBIO Magnolia biondii HOM05D003599 ORTHO05D004221 7.4e-07 58.2 43 60.5
arahy.Tifrunner.gnm1.ann1.7HZ9C0 Arachis hypogaea HOM05D017737 ORTHO05D018488 1.6e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.P3HJWL Arachis hypogaea HOM05D017737 ORTHO05D018488 1.6e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.V362W9 Arachis hypogaea HOM05D003599 ORTHO05D004221 1.6e-06 57.0 42 61.9
arahy.Tifrunner.gnm1.ann1.V4RCLL Arachis hypogaea HOM05D017737 ORTHO05D018488 1.6e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.X69RYV Arachis hypogaea HOM05D003599 ORTHO05D004221 1.6e-06 57.0 42 61.9
Nitab4.5_0001542g0140 Nicotiana tabacum HOM05D003599 ORTHO05D004221 2.8e-06 56.2 49 57.1
THA.LOC104801983 Tarenaya hassleriana HOM05D003599 ORTHO05D004221 3.7e-06 55.8 42 61.9
Glyma.15G271800 Glycine max HOM05D003599 ORTHO05D004221 4.8e-06 55.5 42 59.5
Manes.07G003200 Manihot esculenta HOM05D003599 ORTHO05D004221 4.8e-06 55.5 39 64.1
MBI01_g43277_MAGBIO Magnolia biondii HOM05D003599 ORTHO05D004221 6.2e-06 55.1 42 59.5
Peaxi162Scf00058g00215 Petunia axillaris HOM05D003599 ORTHO05D004221 6.2e-06 55.1 49 57.1
Actinidia28564 Actinidia chinensis HOM05D001390 ORTHO05D030884 8.1e-06 54.7 28 89.3
BcaC07g40293 Brassica carinata HOM05D003004 ORTHO05D003860 8.1e-06 54.7 30 86.7
C08p34080 Brassica napus HOM05D003004 ORTHO05D003860 8.1e-06 54.7 30 86.7


User provided reference genes

Program Settings