Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 5.2e-81 304.3 149 100.0
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 1.4e-62 243.0 151 81.5
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 7.0e-62 240.7 148 79.7
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.2e-61 240.0 149 78.5
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 2.7e-61 238.8 151 76.8
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.0e-60 236.9 150 77.3
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.3e-60 236.5 151 78.8
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 2.9e-60 235.3 145 78.6
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 2.9e-60 235.3 150 76.0
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 6.6e-60 234.2 151 78.1
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 1.1e-59 233.4 150 78.7
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.9e-59 232.6 147 78.2
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 1.9e-59 232.6 150 75.3
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 2.1e-58 229.2 149 75.8
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 4.7e-58 228.0 149 75.2
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 8.0e-58 227.3 149 75.2
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 1.0e-57 226.9 150 78.0
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.4e-57 226.5 149 76.5
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 2.3e-57 225.7 150 74.7
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 3.0e-57 225.3 146 75.3
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 3.0e-57 225.3 149 74.5
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 4.0e-57 224.9 148 75.0
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 4.0e-57 224.9 148 75.0
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 5.2e-57 224.6 153 76.5
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 5.2e-57 224.6 148 75.0
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 6.8e-57 224.2 148 75.0
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 8.9e-57 223.8 148 75.0
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.2e-56 223.4 143 74.1
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.5e-56 223.0 149 74.5
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 2.0e-56 222.6 149 75.8
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 2.0e-56 222.6 148 76.4
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 3.4e-56 221.9 149 73.2
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 4.4e-56 221.5 150 72.7
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 4.4e-56 221.5 148 74.3
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 5.7e-56 221.1 120 81.7
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 5.7e-56 221.1 145 73.8
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 5.7e-56 221.1 150 73.3
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 1.3e-55 219.9 148 70.9
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 1.3e-55 219.9 148 70.9
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.3e-55 219.9 148 72.3
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.7e-55 219.5 148 71.6
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 4.9e-55 218.0 144 74.3
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 4.9e-55 218.0 148 71.6
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 8.3e-55 217.2 149 70.5
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 8.3e-55 217.2 148 71.6
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 8.3e-55 217.2 149 72.5
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 1.1e-54 216.9 145 73.1
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.4e-54 216.5 148 70.9
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.8e-54 216.1 148 70.3
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 3.2e-54 215.3 145 74.5
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 3.2e-54 215.3 148 70.3
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 3.2e-54 215.3 148 70.3
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 3.2e-54 215.3 148 70.3
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 3.2e-54 215.3 148 68.9
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 4.1e-54 214.9 149 69.8
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 7.0e-54 214.2 149 69.1
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 9.2e-54 213.8 149 70.5
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 9.2e-54 213.8 148 68.9
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 9.2e-54 213.8 148 68.9
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.6e-53 213.0 149 69.1
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 2.0e-53 212.6 149 71.1
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 3.5e-53 211.8 149 71.1
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 3.5e-53 211.8 149 71.1
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 4.6e-53 211.5 148 69.6
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 6.0e-53 211.1 148 67.6
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.3e-52 209.9 145 74.5
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 2.3e-52 209.1 148 69.6
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 2.3e-52 209.1 148 69.6
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 3.0e-52 208.8 150 70.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 6.6e-52 207.6 149 69.8
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.1e-51 206.8 149 69.1
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 1.5e-51 206.5 148 67.6
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.5e-51 206.5 115 81.7
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.5e-51 206.5 151 70.2
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.5e-51 206.5 145 69.7
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 3.3e-51 205.3 152 71.7
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 3.3e-51 205.3 151 70.2
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 4.3e-51 204.9 151 70.2
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 5.6e-51 204.5 151 68.9
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 7.3e-51 204.1 146 70.5
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 7.3e-51 204.1 150 70.7
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.6e-50 203.0 151 69.5
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.1e-50 202.6 151 69.5
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 3.6e-50 201.8 149 65.8
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 4.7e-50 201.4 151 68.9
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 6.2e-50 201.1 146 69.2
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 6.2e-50 201.1 137 69.3
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 1.4e-49 199.9 172 59.9
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.4e-49 199.9 151 68.2
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.8e-49 199.5 151 68.9
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 4.0e-49 198.4 150 66.7
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 4.0e-49 198.4 114 78.1
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 6.8e-49 197.6 151 68.2
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 6.8e-49 197.6 131 73.3
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 8.9e-49 197.2 116 80.2
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 8.9e-49 197.2 143 68.5
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 8.9e-49 197.2 150 67.3
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 8.9e-49 197.2 151 67.5
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 4.4e-48 194.9 150 66.0
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 2.2e-47 192.6 137 68.6
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 6.4e-47 191.0 152 65.8
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 4.1e-46 188.3 146 63.7
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 9.2e-46 187.2 119 77.3
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 7.8e-45 184.1 148 62.2
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 1.7e-44 183.0 146 65.1
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 3.9e-44 181.8 150 62.7
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.5e-43 179.9 148 60.8
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 4.3e-43 178.3 148 62.2
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 9.5e-43 177.2 113 71.7
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 5.2e-41 171.4 140 62.1
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 2.0e-40 169.5 119 68.9
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 4.4e-40 168.3 96 78.1
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 2.4e-38 162.5 90 80.0
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.1e-38 161.8 84 85.7
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 7.1e-38 161.0 115 73.9
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 4.6e-37 158.3 86 80.2
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.0e-36 157.1 117 71.8
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 4.0e-33 145.2 118 60.2
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.2e-32 143.7 120 65.0
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 5.8e-32 141.4 117 62.4
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.1e-30 137.1 117 65.8
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.2e-30 135.6 118 64.4
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 4.1e-30 135.2 90 73.3
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 3.0e-28 129.0 89 68.5
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 6.6e-28 127.9 121 60.3
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.6e-26 123.2 148 49.3
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.0e-20 104.0 92 53.3
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.0e-20 104.0 93 61.3
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 4.5e-16 88.6 158 39.2
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 1.3e-15 87.0 146 36.3
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.2e-15 86.3 78 64.1
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 4.9e-15 85.1 78 64.1
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 7.9e-13 77.8 78 60.3
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.3e-12 77.0 72 58.3


User provided reference genes

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