Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.2e-108 395.6 196 100.0
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 4.1e-78 295.0 186 77.4
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.6e-77 293.1 189 77.2
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 2.3e-76 289.3 189 77.2
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 1.1e-75 287.0 189 74.1
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 7.3e-75 284.3 189 75.1
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 9.5e-75 283.9 189 74.1
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 9.5e-75 283.9 189 74.1
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 2.8e-74 282.3 190 74.2
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 2.3e-73 279.3 190 73.2
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 3.1e-73 278.9 193 73.6
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 4.0e-73 278.5 187 74.3
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 6.8e-73 277.7 191 71.2
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.2e-72 276.9 190 71.6
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 3.4e-72 275.4 189 72.0
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 4.4e-72 275.0 191 71.7
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 4.4e-72 275.0 189 74.6
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 2.9e-71 272.3 187 72.7
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 2.9e-71 272.3 187 72.2
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.7e-71 271.9 189 72.0
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 8.3e-71 270.8 189 72.5
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.9e-70 269.6 190 70.5
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.9e-70 269.6 206 68.0
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.9e-70 269.6 189 70.4
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 3.2e-70 268.9 187 72.2
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 3.2e-70 268.9 192 70.3
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 5.4e-70 268.1 187 71.7
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.6e-69 266.5 189 69.8
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 2.1e-69 266.2 187 69.0
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 2.1e-69 266.2 189 69.3
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 2.7e-69 265.8 188 70.2
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 3.5e-69 265.4 191 71.7
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 4.6e-69 265.0 189 68.8
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 4.6e-69 265.0 191 70.7
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 6.0e-69 264.6 189 70.4
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 7.8e-69 264.2 193 70.5
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 1.3e-68 263.5 187 69.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.7e-68 263.1 189 70.4
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 3.0e-68 262.3 189 69.3
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.9e-68 261.9 188 70.7
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 1.1e-67 260.4 189 68.8
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.1e-67 260.4 189 68.3
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.9e-67 259.6 189 68.3
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.9e-67 259.6 191 68.6
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 3.3e-67 258.8 189 68.8
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 4.3e-67 258.5 203 64.5
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 9.5e-67 257.3 189 68.8
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 9.5e-67 257.3 191 68.1
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.6e-66 256.5 191 68.1
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 2.1e-66 256.1 193 68.4
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 3.6e-66 255.4 192 67.2
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 6.2e-66 254.6 187 68.4
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 6.2e-66 254.6 195 63.1
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 1.4e-65 253.4 189 68.8
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.4e-65 253.4 195 63.1
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.8e-65 253.1 195 62.6
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 8.9e-65 250.8 187 66.3
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.2e-64 250.4 197 65.0
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 2.6e-64 249.2 187 63.6
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 4.4e-64 248.4 196 65.3
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 1.3e-63 246.9 190 66.3
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.7e-63 246.5 195 61.5
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.7e-63 246.5 189 66.7
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 4.9e-63 245.0 209 60.8
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 2.4e-62 242.7 191 64.4
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.6e-61 240.0 190 65.3
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 2.1e-61 239.6 190 65.3
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 4.6e-61 238.4 189 60.8
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 6.0e-61 238.0 190 63.2
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.3e-60 236.9 190 65.8
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.3e-60 236.1 192 63.5
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 3.0e-60 235.7 190 64.2
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 3.3e-59 232.3 189 64.0
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 4.3e-59 231.9 189 63.0
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 5.6e-59 231.5 190 61.6
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 7.3e-59 231.1 189 63.0
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 7.3e-59 231.1 189 62.4
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 2.8e-58 229.2 189 61.9
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 3.6e-58 228.8 189 61.4
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 1.1e-57 227.3 194 62.4
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.8e-57 226.5 211 56.9
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.5e-56 223.4 189 60.8
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 2.6e-56 222.6 188 61.2
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 7.6e-56 221.1 189 61.9
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.3e-55 220.3 209 56.0
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 3.8e-55 218.8 236 53.4
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 8.4e-55 217.6 197 58.4
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 4.2e-54 215.3 145 74.5
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 2.1e-53 213.0 217 55.8
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 7.6e-48 194.5 189 56.1
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.9e-46 189.9 191 55.0
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 5.4e-46 188.3 213 51.2
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 7.1e-46 188.0 208 53.4
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 1.7e-44 183.3 191 49.7
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 8.7e-44 181.0 226 49.1
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 9.0e-41 171.0 146 59.6
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 2.1e-37 159.8 202 44.1
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.0e-36 156.0 188 46.8
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 3.5e-29 132.5 108 58.3
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.0e-23 114.4 148 44.6
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 6.0e-21 105.1 150 42.7
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.8e-20 103.6 237 32.5
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 3.0e-20 102.8 55 85.5
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 6.9e-17 91.7 45 88.9
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.7e-15 87.0 45 86.7
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.9e-06 57.0 34 64.7


User provided reference genes

Program Settings