Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.0e-38 162.9 82 100.0
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.9e-30 134.4 80 81.2
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 8.7e-30 133.3 81 84.0
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 9.6e-29 129.8 80 80.0
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.3e-28 129.4 80 81.2
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 4.8e-28 127.5 80 76.2
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 8.1e-28 126.7 76 84.2
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 2.4e-27 125.2 80 78.8
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 3.1e-27 124.8 80 80.0
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 4.0e-27 124.4 80 80.0
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.4e-26 121.3 81 77.8
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 4.5e-26 120.9 80 68.8
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 7.6e-26 120.2 80 75.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 7.6e-26 120.2 77 76.6
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 1.3e-25 119.4 80 73.8
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 2.2e-25 118.6 78 74.4
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 2.2e-25 118.6 80 77.5
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 8.4e-25 116.7 80 68.8
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.1e-24 116.3 81 70.4
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 1.4e-24 115.9 80 73.8
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 1.9e-24 115.5 81 70.4
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 2.4e-24 115.2 76 73.7
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 3.2e-24 114.8 80 73.8
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 5.4e-24 114.0 77 75.3
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 5.4e-24 114.0 90 62.2
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 7.1e-24 113.6 76 72.4
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 9.3e-24 113.2 77 72.7
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.2e-23 112.8 80 71.2
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 1.6e-23 112.5 76 71.1
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.6e-23 112.5 80 71.2
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 2.1e-23 112.1 80 67.5
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 2.7e-23 111.7 81 71.6
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 2.7e-23 111.7 80 66.2
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 4.6e-23 110.9 81 67.9
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 4.6e-23 110.9 80 71.2
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 7.9e-23 110.2 80 67.5
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 7.9e-23 110.2 77 70.1
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 1.3e-22 109.4 80 68.8
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.8e-22 109.0 80 68.8
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 2.3e-22 108.6 80 66.2
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 2.3e-22 108.6 80 68.8
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 3.0e-22 108.2 80 66.2
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 5.1e-22 107.5 80 67.5
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 8.7e-22 106.7 80 66.2
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 8.7e-22 106.7 80 63.8
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.1e-21 106.3 80 65.0
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 1.5e-21 105.9 76 67.1
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.5e-21 105.9 81 70.4
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.9e-21 105.5 80 63.8
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.3e-21 104.4 80 65.0
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 7.4e-21 103.6 80 62.5
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.3e-20 102.8 82 61.0
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 2.1e-20 102.1 79 59.5
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 2.8e-20 101.7 80 66.2
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 3.7e-20 101.3 77 64.9
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 3.7e-20 101.3 80 60.0
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 3.7e-20 101.3 56 85.7
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 6.2e-20 100.5 80 63.8
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 8.1e-20 100.1 80 61.2
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.4e-19 99.4 80 62.5
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.4e-19 99.4 80 62.5
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.4e-19 99.4 80 62.5
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 1.4e-19 99.4 80 66.2
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 1.8e-19 99.0 80 66.2
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 2.4e-19 98.6 80 61.2
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 4.0e-19 97.8 80 61.2
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 5.3e-19 97.4 80 63.8
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 5.3e-19 97.4 79 58.2
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 6.9e-19 97.1 80 62.5
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 9.0e-19 96.7 83 61.4
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.2e-18 96.3 80 65.0
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 1.2e-18 96.3 80 58.8
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.5e-18 95.9 80 63.8
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 2.6e-18 95.1 80 55.0
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 3.4e-18 94.7 76 63.2
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 5.8e-18 94.0 80 62.5
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.3e-17 92.8 80 60.0
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.7e-17 92.4 80 56.2
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 2.9e-17 91.7 78 57.7
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 2.9e-17 91.7 80 61.2
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 4.9e-17 90.9 98 46.9
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.4e-16 89.4 57 73.7
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 1.4e-16 89.4 80 57.5
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.9e-16 89.0 54 79.6
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 2.5e-16 88.6 80 58.8
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.5e-16 88.6 80 58.8
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 2.5e-16 88.6 80 58.8
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.6e-15 85.9 56 76.8
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.6e-15 85.9 58 72.4
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 2.1e-15 85.5 48 81.2
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.5e-13 79.3 54 70.4
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.7e-13 77.4 43 83.7
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 3.7e-12 74.7 56 66.1
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.2e-10 69.7 55 60.0
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.2e-10 69.7 76 44.7
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 2.6e-10 68.6 43 72.1
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.7e-09 65.9 45 71.1
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.2e-09 65.5 76 42.1
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 2.9e-09 65.1 76 46.1
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 5.0e-09 64.3 55 56.4
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 5.0e-09 64.3 76 42.1
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 8.4e-09 63.5 42 71.4
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 1.1e-08 63.2 76 36.8
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.9e-08 62.4 43 62.8
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.2e-07 59.7 53 54.7


User provided reference genes

Program Settings