Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 4.8e-114 414.5 201 100.0
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 3.2e-102 375.2 201 90.0
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.8e-100 369.4 201 89.1
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.2e-98 362.5 204 87.7
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 5.3e-97 357.8 201 88.1
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 5.9e-96 354.4 201 86.6
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.2e-95 352.4 201 87.1
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 2.9e-95 352.1 203 85.2
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 8.5e-95 350.5 205 84.4
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.9e-94 349.4 204 84.8
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 4.2e-94 348.2 204 84.3
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 4.7e-93 344.7 204 85.3
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.8e-92 342.8 204 84.8
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.3e-92 342.4 201 83.6
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 3.0e-92 342.0 201 84.1
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 8.8e-92 340.5 201 83.1
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.5e-91 339.7 201 83.1
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 2.6e-91 339.0 202 84.2
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 4.4e-91 338.2 203 81.8
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 7.4e-91 337.4 212 80.2
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.7e-90 336.3 202 83.2
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 6.3e-90 334.3 204 82.4
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 1.1e-89 333.6 201 80.6
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 1.4e-89 333.2 205 82.0
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 1.4e-89 333.2 209 79.9
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 7.0e-89 330.9 201 81.1
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.5e-88 329.7 202 80.7
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.6e-88 328.9 201 79.6
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 3.4e-88 328.6 202 80.7
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 7.7e-88 327.4 205 81.0
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.3e-87 326.6 195 80.5
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 2.2e-87 325.9 203 79.3
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 3.8e-87 325.1 202 79.7
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 6.5e-87 324.3 212 76.9
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 6.5e-87 324.3 203 81.3
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 6.5e-87 324.3 201 78.6
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 8.5e-87 323.9 194 80.4
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 8.5e-87 323.9 213 77.0
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.9e-86 322.8 203 77.8
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 2.5e-86 322.4 176 85.8
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 4.2e-86 321.6 204 78.9
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 4.2e-86 321.6 201 78.6
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 5.5e-86 321.2 201 80.1
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 5.5e-86 321.2 213 77.5
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 7.2e-86 320.9 201 81.1
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.2e-85 320.1 204 77.9
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 3.6e-85 318.5 204 77.9
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 4.7e-85 318.2 196 80.6
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 6.1e-85 317.8 202 77.2
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.0e-84 317.0 204 78.4
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 1.4e-84 316.6 204 78.4
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 3.0e-84 315.5 201 75.1
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 3.0e-84 315.5 204 78.4
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 3.0e-84 315.5 204 78.4
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 3.0e-84 315.5 204 78.4
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 3.0e-84 315.5 202 78.7
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 5.2e-84 314.7 201 79.1
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 6.7e-84 314.3 205 75.1
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 1.5e-83 313.2 189 82.0
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.5e-83 313.2 201 78.6
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 2.6e-83 312.4 204 73.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 5.7e-83 311.2 230 70.9
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 7.4e-83 310.8 189 82.0
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 1.3e-82 310.1 190 82.6
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.8e-82 308.9 201 74.1
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 4.8e-82 308.1 203 75.4
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 4.8e-82 308.1 202 74.8
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 6.3e-82 307.8 202 76.2
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.1e-81 307.0 171 82.5
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 4.1e-81 305.1 171 81.3
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 7.0e-81 304.3 201 74.1
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 2.0e-80 302.8 222 68.0
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 3.5e-80 302.0 203 73.9
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.5e-80 302.0 181 79.6
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 3.5e-80 302.0 202 73.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 5.9e-80 301.2 171 81.3
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 2.5e-78 295.8 181 79.6
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 2.7e-77 292.4 197 71.6
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.0e-76 290.4 153 88.9
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 6.7e-76 287.7 170 80.6
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 9.1e-73 277.3 173 82.1
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 9.1e-73 277.3 176 80.7
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 4.5e-72 275.0 214 68.7
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.7e-71 273.1 164 81.1
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.7e-71 273.1 184 77.2
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 5.5e-70 268.1 183 71.0
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 4.7e-69 265.0 185 74.6
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 5.2e-68 261.5 137 87.6
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.3e-66 256.9 141 83.7
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 4.8e-66 255.0 179 74.9
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 6.3e-66 254.6 221 63.8
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 2.9e-63 245.7 137 83.2
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 5.5e-62 241.5 171 66.1
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 3.4e-59 232.3 161 74.5
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 1.1e-57 227.3 168 64.3
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 7.0e-57 224.6 163 64.4
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 3.5e-56 222.2 152 70.4
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 3.5e-56 222.2 111 92.8
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 9.2e-49 197.6 192 60.4
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 3.9e-47 192.2 159 58.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.5e-27 127.1 140 43.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.9e-17 93.6 165 41.2
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.5e-11 73.9 133 37.6
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 8.4e-10 68.2 37 78.4


User provided reference genes

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