Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035680001 Vitis vinifera HOM05D000542 ORTHO05D000202 2.7e-35 151.4 73 100.0
GSVIVG01035679001 Vitis vinifera HOM05D000542 ORTHO05D000202 3.9e-13 77.8 52 67.3
TWI63G0293 Tripterygium wilfordii HOM05D000542 ORTHO05D000202 5.6e-12 73.9 63 57.1
TAR383G0864 Trochodendron aralioides HOM05D000542 ORTHO05D000202 5.6e-12 73.9 54 61.1
Potri.006G243600 Populus trichocarpa HOM05D000542 ORTHO05D000202 7.3e-12 73.6 51 62.7
Dinv14219 Davidia involucrata HOM05D000542 ORTHO05D000202 3.6e-11 71.2 53 58.5
GSVIVG01035682001 Vitis vinifera HOM05D000542 ORTHO05D000202 8.0e-11 70.1 44 65.9
QL12p026208 Quercus lobata HOM05D000542 ORTHO05D000202 1.8e-10 68.9 51 58.8
MSTRG.25897 Avicennia marina HOM05D000542 ORTHO05D000202 2.3e-10 68.6 57 57.9
Dinv14216 Davidia involucrata HOM05D000542 ORTHO05D000202 2.3e-10 68.6 54 55.6
TWI32G1221 Tripterygium wilfordii HOM05D000542 ORTHO05D000202 2.3e-10 68.6 49 61.2
Glyma.06G081100 Glycine max HOM05D000542 ORTHO05D000202 3.1e-10 68.2 53 58.5
Manes.03G066380 Manihot esculenta HOM05D000542 ORTHO05D000202 3.1e-10 68.2 53 56.6
Potri.018G036700 Populus trichocarpa HOM05D000542 ORTHO05D000202 3.1e-10 68.2 51 56.9
VMungo1309G0525 Vigna mungo HOM05D000542 ORTHO05D000202 4.0e-10 67.8 54 53.7
Ciclev10008742m.g Citrus clementina HOM05D000542 ORTHO05D000202 5.2e-10 67.4 51 54.9
Atru.chr7.2173 Acer truncatum HOM05D000542 ORTHO05D000202 6.8e-10 67.0 60 53.3
Atru.chr7.2289 Acer truncatum HOM05D000542 ORTHO05D000202 1.2e-09 66.2 60 51.7
CSS0015194 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 1.2e-09 66.2 51 54.9
Aqoxy7G01674 Aquilegia oxysepala HOM05D000542 ORTHO05D000202 1.5e-09 65.9 50 64.0
Medtr3g109490 Medicago truncatula HOM05D000542 ORTHO05D000202 1.5e-09 65.9 54 51.9
Atru.chr7.2290 Acer truncatum HOM05D000542 ORTHO05D000202 2.0e-09 65.5 49 59.2
SalBow4G2992 Salvia bowleyana HOM05D000542 ORTHO05D000202 2.0e-09 65.5 48 62.5
Atru.chr7.2175 Acer truncatum HOM05D000542 ORTHO05D000202 3.4e-09 64.7 60 50.0
Atru.chr7.2292 Acer truncatum HOM05D000542 ORTHO05D000202 3.4e-09 64.7 60 50.0
Cpa.g.sc205.1 Carica papaya HOM05D000542 ORTHO05D000202 3.4e-09 64.7 59 52.5
Glyma.04G079600 Glycine max HOM05D000542 ORTHO05D000202 3.4e-09 64.7 53 56.6
Lj7C708T7 Lonicera japonica HOM05D000542 ORTHO05D000202 3.4e-09 64.7 54 50.0
Lj1g0008280 Lotus japonicus HOM05D000542 ORTHO05D000202 3.4e-09 64.7 58 50.0
Prupe.1G453500 Prunus persica HOM05D000542 ORTHO05D000202 5.8e-09 63.9 54 48.1
Actinidia14657 Actinidia chinensis HOM05D000542 ORTHO05D000202 7.5e-09 63.5 55 50.9
Actinidia14658 Actinidia chinensis HOM05D000542 ORTHO05D000202 7.5e-09 63.5 58 50.0
DCAR_000738 Daucus carota HOM05D000542 ORTHO05D000202 7.5e-09 63.5 55 52.7
Glyma.14G141000 Glycine max HOM05D000542 ORTHO05D000202 7.5e-09 63.5 55 56.4
FAN27G2567 Fragaria x ananassa HOM05D000542 ORTHO05D000202 9.8e-09 63.2 44 61.4
Lalb_Chr08g0243311 Lupinus albus HOM05D000542 ORTHO05D000202 9.8e-09 63.2 56 51.8
TPR.G1345 Trifolium pratense HOM05D000542 ORTHO05D000202 9.8e-09 63.2 51 54.9
Hund19556 Selenicereus undatus HOM05D000542 ORTHO05D000202 1.3e-08 62.8 51 54.9
Cc08_g08470 Coffea canephora HOM05D000542 ORTHO05D000202 2.2e-08 62.0 55 52.7
TPR.G11983 Trifolium pratense HOM05D000542 ORTHO05D000202 2.2e-08 62.0 54 50.0
Actinidia15724 Actinidia chinensis HOM05D000542 ORTHO05D000202 2.9e-08 61.6 56 51.8
Gohir.A05G048700 Gossypium hirsutum HOM05D000542 ORTHO05D000202 3.7e-08 61.2 50 56.0
Gorai.009G052200 Gossypium raimondii HOM05D000542 ORTHO05D000202 3.7e-08 61.2 50 56.0
CiPaw.07G207900 Carya illinoinensis HOM05D000542 ORTHO05D000202 6.4e-08 60.5 55 52.7
Gohir.D05G050600 Gossypium hirsutum HOM05D000542 ORTHO05D000202 6.4e-08 60.5 50 56.0
Medtr1g008500 Medicago truncatula HOM05D000542 ORTHO05D000202 6.4e-08 60.5 54 50.0
FvH4_2g36250 Fragaria vesca HOM05D000542 ORTHO05D000202 8.3e-08 60.1 44 59.1
Gohir.D05G050700 Gossypium hirsutum HOM05D000542 ORTHO05D000202 1.1e-07 59.7 50 54.0
Hma1.2p1_0003F.1_g003730 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.1e-07 59.7 60 48.3
Hma1.2p1_0140F.1_g063630 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.1e-07 59.7 60 46.7
TAR624G1414 Trochodendron aralioides HOM05D000542 ORTHO05D000202 1.1e-07 59.7 51 52.9
Gorai.009G052100 Gossypium raimondii HOM05D000542 ORTHO05D000202 1.4e-07 59.3 50 54.0
Sabra18G0037300 Salix brachista HOM05D000542 ORTHO05D000202 1.4e-07 59.3 48 54.2
Cc08_g08460 Coffea canephora HOM05D000542 ORTHO05D000202 1.9e-07 58.9 51 54.9
DCAR_004505 Daucus carota HOM05D000542 ORTHO05D000202 2.4e-07 58.5 57 45.6
Thhalv10004736m.g Eutrema salsugineum HOM05D000542 ORTHO05D000202 2.4e-07 58.5 58 46.6
COL.COLO4_18704 Corchorus olitorius HOM05D000542 ORTHO05D000202 3.2e-07 58.2 57 50.9
Rhsim07G0154100 Rhododendron simsii HOM05D000542 ORTHO05D000202 4.1e-07 57.8 54 48.1
Thecc.09G038800 Theobroma cacao HOM05D000542 ORTHO05D000202 4.1e-07 57.8 65 50.8
Actinidia12835 Actinidia chinensis HOM05D000542 ORTHO05D000202 5.4e-07 57.4 57 47.4
Duzib150G0871 Durio zibethinus HOM05D000542 ORTHO05D000202 5.4e-07 57.4 55 52.7
Lj1g0023869 Lotus japonicus HOM05D000542 ORTHO05D000202 5.4e-07 57.4 54 46.3
Eucgr.C02887 Eucalyptus grandis HOM05D000542 ORTHO05D000202 7.0e-07 57.0 52 51.9
Lj8A693G8 Lonicera japonica HOM05D000542 ORTHO05D000202 7.0e-07 57.0 54 44.4
Phvul.009G105300 Phaseolus vulgaris HOM05D000542 ORTHO05D000202 7.0e-07 57.0 55 45.5
Haze_21829 Corylus avellana HOM05D000542 ORTHO05D000202 9.2e-07 56.6 54 46.3
Haze_21834 Corylus avellana HOM05D000542 ORTHO05D000202 9.2e-07 56.6 54 46.3
Lj8C692T1 Lonicera japonica HOM05D000542 ORTHO05D000202 9.2e-07 56.6 54 42.6
PGR044G1623 Punica granatum HOM05D000542 ORTHO05D000202 9.2e-07 56.6 56 44.6
Lj8C694T2 Lonicera japonica HOM05D000542 ORTHO05D000202 1.2e-06 56.2 54 42.6
PSO198G0076 Papaver somniferum HOM05D000542 ORTHO05D000202 1.2e-06 56.2 61 39.3
SGA_v2.0_scaffold243G44299 Striga asiatica HOM05D000542 ORTHO05D000202 1.2e-06 56.2 39 59.0
EL10Ac2g04088 Beta vulgaris HOM05D000542 ORTHO05D000202 1.6e-06 55.8 52 46.2
CAN.G1060.2 Capsicum annuum HOM05D000542 ORTHO05D000202 1.6e-06 55.8 65 46.2
Duzib168G1394 Durio zibethinus HOM05D000542 ORTHO05D000202 1.6e-06 55.8 50 58.0
HanXRQChr10g0313851 Helianthus annuus HOM05D000542 ORTHO05D000202 1.6e-06 55.8 61 44.3
HanXRQChr13g0424661 Helianthus annuus HOM05D000542 ORTHO05D000202 1.6e-06 55.8 59 42.4
Cfa013337 Carpinus fangiana HOM05D000542 ORTHO05D000202 2.0e-06 55.5 54 44.4
FAN20G0120 Fragaria x ananassa HOM05D000542 ORTHO05D000202 2.0e-06 55.5 44 54.5
Glyma.14G140900 Glycine max HOM05D000542 ORTHO05D000202 2.0e-06 55.5 56 44.6
MD04G1018200 Malus domestica HOM05D000542 ORTHO05D000202 2.0e-06 55.5 61 45.9
Manes.16G066600 Manihot esculenta HOM05D000542 ORTHO05D000202 2.0e-06 55.5 64 40.6
Sp2g21920 Schrenkiella parvula HOM05D000542 ORTHO05D000202 2.0e-06 55.5 58 43.1
Solyc08g068150.4 Solanum lycopersicum HOM05D000542 ORTHO05D000202 2.0e-06 55.5 52 53.8
CANSAT35G0422 Cannabis sativa HOM05D000542 ORTHO05D000202 2.7e-06 55.1 57 52.6
COL.COLO4_04120 Corchorus olitorius HOM05D000542 ORTHO05D000202 2.7e-06 55.1 37 62.2
Lj8A690T43 Lonicera japonica HOM05D000542 ORTHO05D000202 2.7e-06 55.1 54 40.7
Lj8A691G18 Lonicera japonica HOM05D000542 ORTHO05D000202 2.7e-06 55.1 49 46.9
Lj8A691T19 Lonicera japonica HOM05D000542 ORTHO05D000202 2.7e-06 55.1 54 40.7
Oeu027036.1 Olea europaea HOM05D000542 ORTHO05D000202 2.7e-06 55.1 55 43.6
Thecc.09G038700 Theobroma cacao HOM05D000542 ORTHO05D000202 2.7e-06 55.1 48 56.2
MD15G1098800 Malus domestica HOM05D000542 ORTHO05D000202 3.5e-06 54.7 51 51.0
Nitab4.5_0001403g0020 Nicotiana tabacum HOM05D000542 ORTHO05D000202 3.5e-06 54.7 56 50.0
PSO782G5471 Papaver somniferum HOM05D000542 ORTHO05D000202 3.5e-06 54.7 61 37.7
Sopen08g022010 Solanum pennellii HOM05D000542 ORTHO05D000202 3.5e-06 54.7 52 53.8
BcaB04g19775 Brassica carinata HOM05D000542 ORTHO05D000202 4.6e-06 54.3 56 42.9
BcaB04g19778 Brassica carinata HOM05D000542 ORTHO05D000202 4.6e-06 54.3 56 42.9
A06p36310 Brassica napus HOM05D000542 ORTHO05D000202 4.6e-06 54.3 58 43.1
Lsat_1_v5_gn_1_48900 Lactuca sativa HOM05D000542 ORTHO05D000202 4.6e-06 54.3 58 44.8
MBI04_g22004_MAGBIO Magnolia biondii HOM05D000542 ORTHO05D000202 4.6e-06 54.3 57 47.4
Thecc.09G242300 Theobroma cacao HOM05D000542 ORTHO05D000202 4.6e-06 54.3 54 50.0
vmacro23259 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 6.0e-06 53.9 54 51.9
arahy.Tifrunner.gnm1.ann1.NG4XB7 Arachis hypogaea HOM05D000542 ORTHO05D000202 7.8e-06 53.5 55 45.5
BcaB04g19783 Brassica carinata HOM05D000542 ORTHO05D000202 7.8e-06 53.5 58 41.4
HanXRQChr01g0029491 Helianthus annuus HOM05D000542 ORTHO05D000202 7.8e-06 53.5 52 44.2
MD15G1219500 Malus domestica HOM05D000542 ORTHO05D000202 7.8e-06 53.5 61 50.8
THA.LOC104799209 Tarenaya hassleriana HOM05D000542 ORTHO05D000202 7.8e-06 53.5 58 48.3


User provided reference genes

Program Settings