Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035661001 Vitis vinifera HOM05D001115 ORTHO05D011468 6.4e-123 444.1 230 100.0
CiPaw.07G206500 Carya illinoinensis HOM05D001115 ORTHO05D011468 1.4e-40 170.6 184 48.4
Dinv14233 Davidia involucrata HOM05D001115 ORTHO05D011468 1.5e-39 167.2 143 58.0
Cc08_g09090 Coffea canephora HOM05D001115 ORTHO05D011468 2.7e-36 156.4 152 49.3
Atru.chr7.2150 Acer truncatum HOM05D001115 ORTHO05D011468 3.0e-35 152.9 190 45.3
Eucgr.C02896 Eucalyptus grandis HOM05D001115 ORTHO05D011468 2.5e-34 149.8 146 52.7
Ciclev10010490m.g Citrus clementina HOM05D001115 ORTHO05D011468 7.3e-34 148.3 148 50.7
MD15G1096800 Malus domestica HOM05D001115 ORTHO05D011468 8.1e-33 144.8 188 43.6
Cc06_g18740 Coffea canephora HOM05D001115 ORTHO05D011468 2.4e-32 143.3 143 49.7
PGR044G2696 Punica granatum HOM05D001115 ORTHO05D011468 4.0e-32 142.5 200 42.0
Actinidia15732 Actinidia chinensis HOM05D001115 ORTHO05D011468 5.2e-32 142.1 144 47.9
Thecc.09G040900 Theobroma cacao HOM05D001115 ORTHO05D011468 8.9e-32 141.4 190 42.6
Gohir.D06G095600 Gossypium hirsutum HOM05D001115 ORTHO05D011468 2.0e-31 140.2 161 44.7
Gorai.010G110100 Gossypium raimondii HOM05D001115 ORTHO05D011468 2.0e-31 140.2 161 44.7
Prupe.1G451700 Prunus persica HOM05D001115 ORTHO05D011468 7.6e-31 138.3 194 41.8
TWI34G1268 Tripterygium wilfordii HOM05D001115 ORTHO05D011468 9.9e-31 137.9 200 44.0
RcHm_v2.0_Chr6g0305861 Rosa chinensis HOM05D001115 ORTHO05D011468 9.2e-29 131.3 148 46.6
FvH4_2g36010 Fragaria vesca HOM05D001115 ORTHO05D011468 7.8e-28 128.3 151 46.4
Nn3g18076 Nelumbo nucifera HOM05D001115 ORTHO05D011468 1.7e-27 127.1 156 46.2
QL12p026643 Quercus lobata HOM05D001115 ORTHO05D011468 3.9e-27 125.9 207 38.2
QL12p029602 Quercus lobata HOM05D001115 ORTHO05D011468 3.9e-27 125.9 207 38.2
Potri.018G038400 Populus trichocarpa HOM05D001115 ORTHO05D011468 4.3e-26 122.5 185 37.8
FAN15G0541 Fragaria x ananassa HOM05D001021 ORTHO05D000894 4.8e-25 119.0 137 46.7
MD08G1117200 Malus domestica HOM05D001115 ORTHO05D011468 4.0e-24 115.9 104 55.8
Potri.006G241400 Populus trichocarpa HOM05D001115 ORTHO05D011468 1.2e-23 114.4 187 38.0
Sabra18G0038800 Salix brachista HOM05D001115 ORTHO05D011468 1.1e-16 91.3 150 36.7
Gohir.A06G095500 Gossypium hirsutum HOM05D001115 ORTHO05D011468 4.0e-16 89.4 193 32.6
Manes.03G061200 Manihot esculenta HOM05D001115 ORTHO05D011468 7.9e-12 75.1 162 34.0
Dinv12923 Davidia involucrata HOM05D001115 ORTHO05D001023 1.8e-11 73.9 162 27.2
Dinv02169 Davidia involucrata HOM05D001115 ORTHO05D001023 3.0e-11 73.2 162 27.2
vmacro05362 Vaccinium macrocarpon HOM05D001115 ORTHO05D011468 1.1e-10 71.2 120 33.3
Atru.chr10.1912 Acer truncatum HOM05D001115 ORTHO05D001023 2.5e-10 70.1 124 29.0
Actinidia11044 Actinidia chinensis HOM05D001115 ORTHO05D001023 2.5e-10 70.1 162 27.8
ATR0680G167 Amborella trichopoda HOM05D001115 ORTHO05D001023 2.5e-10 70.1 122 32.0
Nitab4.5_0002526g0050 Nicotiana tabacum HOM05D001115 ORTHO05D001023 3.3e-10 69.7 163 27.6
Nitab4.5_0000512g0160 Nicotiana tabacum HOM05D001115 ORTHO05D001023 9.6e-10 68.2 163 27.6
Sabra06G0188800 Salix brachista HOM05D001115 ORTHO05D011468 1.3e-09 67.8 105 36.2
Carub.0003s3526 Capsella rubella HOM05D001115 ORTHO05D001023 1.6e-09 67.4 125 28.0
Glyma.12G111700 Glycine max HOM05D001115 ORTHO05D001023 1.6e-09 67.4 115 33.0
Glyma.06G293700 Glycine max HOM05D001115 ORTHO05D001023 2.1e-09 67.0 115 32.2
Prupe.3G155500 Prunus persica HOM05D001115 ORTHO05D001023 2.8e-09 66.6 160 26.2
HPP92_021013 Vanilla planifolia HOM05D001115 ORTHO05D001023 2.8e-09 66.6 124 26.6
Lalb_Chr19g0135301 Lupinus albus HOM05D001115 ORTHO05D001023 3.7e-09 66.2 115 30.4
TPR.G21758 Trifolium pratense HOM05D001115 ORTHO05D001023 3.7e-09 66.2 115 31.3
MSTRG.12313 Avicennia marina HOM05D001115 ORTHO05D001023 4.8e-09 65.9 125 28.0
Potri.013G134200 Populus trichocarpa HOM05D001115 ORTHO05D001023 4.8e-09 65.9 159 23.9
SEGI_40407 Sequoiadendron giganteum HOM05D001115 ORTHO05D001023 4.8e-09 65.9 125 29.6
Nn1g04044 Nelumbo nucifera HOM05D001115 ORTHO05D001023 6.2e-09 65.5 121 28.9
Phvul.011G117300 Phaseolus vulgaris HOM05D001115 ORTHO05D001023 6.2e-09 65.5 115 32.2
AL3G53850 Arabidopsis lyrata HOM05D001115 ORTHO05D001023 8.1e-09 65.1 125 28.0
Ca_25914_v3 Cicer arietinum L. HOM05D001115 ORTHO05D001023 1.1e-08 64.7 115 30.4
Hma1.2p1_1201F.1_g266710 Hydrangea macrophylla HOM05D001115 ORTHO05D001023 1.1e-08 64.7 141 26.2
VMungo0720G0795 Vigna mungo HOM05D001115 ORTHO05D001023 1.4e-08 64.3 153 29.4
GSVIVG01030374001 Vitis vinifera HOM05D001115 ORTHO05D001023 1.4e-08 64.3 159 24.5
AT2G20740 Arabidopsis thaliana HOM05D001115 ORTHO05D001023 1.8e-08 63.9 125 27.2
Duzib160G0769 Durio zibethinus HOM05D001115 ORTHO05D001023 1.8e-08 63.9 127 29.9
Migut.H01075 Erythranthe guttata HOM05D001115 ORTHO05D001023 1.8e-08 63.9 125 28.0
Rhsim07G0153200 Rhododendron simsii HOM05D001115 ORTHO05D011468 1.8e-08 63.9 86 41.9
vmacro09277 Vaccinium macrocarpon HOM05D001115 ORTHO05D001023 1.8e-08 63.9 160 26.2
VMungo1127G0219 Vigna mungo HOM05D001115 ORTHO05D001023 2.4e-08 63.5 115 31.3
GSVIVG01028484001 Vitis vinifera HOM05D001115 ORTHO05D001023 2.4e-08 63.5 113 31.0
MD17G1242500 Malus domestica HOM05D001115 ORTHO05D001023 4.0e-08 62.8 139 26.6
Manes.13G147500 Manihot esculenta HOM05D001115 ORTHO05D001023 4.0e-08 62.8 150 26.0
Peaxi162Scf00132g00422 Petunia axillaris HOM05D001115 ORTHO05D001023 4.0e-08 62.8 177 24.3
Atru.chr6.3006 Acer truncatum HOM05D001115 ORTHO05D001023 5.3e-08 62.4 150 25.3
AT2G20230 Arabidopsis thaliana HOM05D001115 ORTHO05D001023 5.3e-08 62.4 155 25.8
MELO3C013608.2 Cucumis melo HOM05D001115 ORTHO05D001023 5.3e-08 62.4 145 25.5
FAN16G2292 Fragaria x ananassa HOM05D001115 ORTHO05D001023 5.3e-08 62.4 123 26.8
FAN21G2614 Fragaria x ananassa HOM05D001115 ORTHO05D001023 5.3e-08 62.4 123 26.8
FAN25G2831 Fragaria x ananassa HOM05D001115 ORTHO05D001023 5.3e-08 62.4 123 26.8
Sp3g33990 Schrenkiella parvula HOM05D001115 ORTHO05D001023 5.3e-08 62.4 130 27.7
TAR626G1725 Trochodendron aralioides HOM05D001115 ORTHO05D001023 5.3e-08 62.4 124 28.2
Lj3g0023189 Lotus japonicus HOM05D001115 ORTHO05D001023 6.9e-08 62.0 115 29.6
Oeu058381.1 Olea europaea HOM05D001115 ORTHO05D001023 6.9e-08 62.0 139 26.6
TAR624G0150 Trochodendron aralioides HOM05D001115 ORTHO05D001023 6.9e-08 62.0 143 28.0
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 9.0e-08 61.6 145 25.5
BcaNung07249 Brassica carinata HOM05D001115 ORTHO05D001023 1.2e-07 61.2 172 26.2
C01p10730 Brassica napus HOM05D001115 ORTHO05D001023 1.2e-07 61.2 172 26.2
BolC1t01032H Brassica oleracea HOM05D001115 ORTHO05D001023 1.2e-07 61.2 172 26.2
CAN.G248.20 Capsicum annuum HOM05D001115 ORTHO05D001023 1.2e-07 61.2 169 23.7
CARHR236560 Cardamine hirsuta HOM05D001115 ORTHO05D001023 1.2e-07 61.2 172 25.6
CiPaw.04G125100 Carya illinoinensis HOM05D001115 ORTHO05D001023 1.2e-07 61.2 115 27.8
Dinv07543 Davidia involucrata HOM05D001115 ORTHO05D001023 1.2e-07 61.2 145 28.3
TWI18G0226 Tripterygium wilfordii HOM05D001115 ORTHO05D001023 1.2e-07 61.2 115 29.6
BcaNung01366 Brassica carinata HOM05D001115 ORTHO05D001023 1.5e-07 60.8 175 25.7
Cpa.g.sc27.59 Carica papaya HOM05D001115 ORTHO05D001023 1.5e-07 60.8 122 28.7
Lj2A287T55 Lonicera japonica HOM05D001115 ORTHO05D001023 1.5e-07 60.8 142 29.6
TPR.G25868 Trifolium pratense HOM05D001115 ORTHO05D001023 1.5e-07 60.8 162 27.2
Actinidia09860 Actinidia chinensis HOM05D001115 ORTHO05D001023 2.0e-07 60.5 130 27.7
A01p09140 Brassica napus HOM05D001115 ORTHO05D001023 2.0e-07 60.5 172 25.6
BraA01t00860Z Brassica rapa HOM05D001115 ORTHO05D001023 2.0e-07 60.5 172 25.6
RcHm_v2.0_Chr5g0008101 Rosa chinensis HOM05D001115 ORTHO05D001023 2.0e-07 60.5 123 26.0
TWI36G0781 Tripterygium wilfordii HOM05D001115 ORTHO05D001023 2.0e-07 60.5 115 29.6
CARHR110720 Cardamine hirsuta HOM05D001115 ORTHO05D001023 2.6e-07 60.1 164 25.6
CiPaw.03G273500 Carya illinoinensis HOM05D001115 ORTHO05D001023 2.6e-07 60.1 150 25.3
Eucgr.A01807 Eucalyptus grandis HOM05D001115 ORTHO05D001023 2.6e-07 60.1 139 24.5
FvH4_3g04940 Fragaria vesca HOM05D001115 ORTHO05D001023 2.6e-07 60.1 123 26.0
Sp7g26780 Schrenkiella parvula HOM05D001115 ORTHO05D001023 2.6e-07 60.1 173 27.2
AL7G23730 Arabidopsis lyrata HOM05D001115 ORTHO05D001023 3.4e-07 59.7 172 25.6
Carub.0003s3456 Capsella rubella HOM05D001115 ORTHO05D001023 3.4e-07 59.7 155 25.8
Duzib248G1488 Durio zibethinus HOM05D001115 ORTHO05D001023 3.4e-07 59.7 150 27.3
FvH4_6g26130 Fragaria vesca HOM05D001115 ORTHO05D001023 3.4e-07 59.7 113 31.0
Lalb_Chr21g0314211 Lupinus albus HOM05D001115 ORTHO05D001023 3.4e-07 59.7 152 27.6
Manes.13G042700 Manihot esculenta HOM05D001115 ORTHO05D001023 3.4e-07 59.7 130 26.9
Os04g0679900 Oryza sativa ssp. japonica HOM05D001115 ORTHO05D001023 3.4e-07 59.7 125 24.8
Potri.019G101800 Populus trichocarpa HOM05D001115 ORTHO05D001023 3.4e-07 59.7 159 22.6
RcHm_v2.0_Chr2g0126211 Rosa chinensis HOM05D001115 ORTHO05D001023 3.4e-07 59.7 143 28.7
Hund18346 Selenicereus undatus HOM05D001115 ORTHO05D001023 3.4e-07 59.7 113 29.2
SEGI_03400 Sequoiadendron giganteum HOM05D001115 ORTHO05D001023 3.4e-07 59.7 125 29.6
SEGI_10783 Sequoiadendron giganteum HOM05D001115 ORTHO05D001023 3.4e-07 59.7 125 29.6
Atru.chr5.1924 Acer truncatum HOM05D001115 ORTHO05D001023 4.5e-07 59.3 142 27.5
Duzib052G0128 Durio zibethinus HOM05D001115 ORTHO05D001023 4.5e-07 59.3 152 26.3
MBI17_g43193_MAGBIO Magnolia biondii HOM05D001115 ORTHO05D001023 4.5e-07 59.3 127 28.3
Aa31LG2G21600 Aethionema arabicum HOM05D001115 ORTHO05D001023 5.8e-07 58.9 149 24.8
BcaNung01365 Brassica carinata HOM05D001115 ORTHO05D001023 5.8e-07 58.9 173 24.9
Carub.0007s1187 Capsella rubella HOM05D001115 ORTHO05D001023 5.8e-07 58.9 172 26.7
Cpa.g.sc34.143 Carica papaya HOM05D001115 ORTHO05D001023 5.8e-07 58.9 156 24.4
ECA247G0706 Erigeron canadensis HOM05D001115 ORTHO05D001023 7.6e-07 58.5 111 23.4
FAN11G0571 Fragaria x ananassa HOM05D001115 ORTHO05D001023 7.6e-07 58.5 123 25.2
PSO675G8670 Papaver somniferum HOM05D001115 ORTHO05D001023 7.6e-07 58.5 124 25.0
Potri.011G050900 Populus trichocarpa HOM05D001115 ORTHO05D001023 7.6e-07 58.5 143 28.0
PGSC0003DMG400018311 Solanum tuberosum HOM05D001115 ORTHO05D001023 7.6e-07 58.5 115 27.8
CSS0040668 Camellia sinensis var. sinensis HOM05D001115 ORTHO05D001023 1.0e-06 58.2 124 27.4
Gohir.D10G025300 Gossypium hirsutum HOM05D001115 ORTHO05D001023 1.0e-06 58.2 128 27.3
Gorai.011G026600 Gossypium raimondii HOM05D001115 ORTHO05D001023 1.0e-06 58.2 128 27.3
Sp3g33460 Schrenkiella parvula HOM05D001115 ORTHO05D001023 1.0e-06 58.2 113 28.3
AL3G47860 Arabidopsis lyrata HOM05D001115 ORTHO05D001023 1.3e-06 57.8 128 25.8
arahy.Tifrunner.gnm1.ann1.E3DXNV Arachis hypogaea HOM05D001115 ORTHO05D001023 1.3e-06 57.8 115 27.8
BcaB03g16814 Brassica carinata HOM05D001115 ORTHO05D001023 1.3e-06 57.8 113 28.3
BcaC06g36698 Brassica carinata HOM05D001115 ORTHO05D001023 1.3e-06 57.8 113 28.3
C07p00970 Brassica napus HOM05D001115 ORTHO05D001023 1.3e-06 57.8 113 28.3
BolC7t40534H Brassica oleracea HOM05D001115 ORTHO05D001023 1.3e-06 57.8 113 28.3
Ca_09625_v3 Cicer arietinum L. HOM05D001115 ORTHO05D001023 1.3e-06 57.8 162 27.2
Gohir.A10G024600 Gossypium hirsutum HOM05D001115 ORTHO05D001023 1.3e-06 57.8 128 26.6
Gohir.D08G210700 Gossypium hirsutum HOM05D001115 ORTHO05D001023 1.3e-06 57.8 142 25.4
ATR0787G050 Amborella trichopoda HOM05D001115 ORTHO05D001023 1.7e-06 57.4 139 27.3
arahy.Tifrunner.gnm1.ann1.4RWK86 Arachis hypogaea HOM05D001115 ORTHO05D001023 1.7e-06 57.4 155 30.3
Lj5g0023490 Lotus japonicus HOM05D001115 ORTHO05D001023 1.7e-06 57.4 153 27.5
Eucgr.D00635 Eucalyptus grandis HOM05D001115 ORTHO05D001023 2.2e-06 57.0 140 23.6
Manes.16G026100 Manihot esculenta HOM05D001115 ORTHO05D001023 2.2e-06 57.0 123 27.6
SGA_v2.0_scaffold109G31116 Striga asiatica HOM05D001115 ORTHO05D001023 2.2e-06 57.0 124 26.6
AT4G28770 Arabidopsis thaliana HOM05D001115 ORTHO05D001023 2.9e-06 56.6 113 27.4
arahy.Tifrunner.gnm1.ann1.ALBM4S Arachis hypogaea HOM05D001115 ORTHO05D001023 2.9e-06 56.6 113 28.3
A07p00520 Brassica napus HOM05D001115 ORTHO05D001023 2.9e-06 56.6 113 27.4
BraA07t27846Z Brassica rapa HOM05D001115 ORTHO05D001023 2.9e-06 56.6 113 27.4
CANSAT78G1646 Cannabis sativa HOM05D001115 ORTHO05D001023 2.9e-06 56.6 125 26.4
ClCG02G017570 Citrullus lanatus HOM05D001115 ORTHO05D001023 2.9e-06 56.6 114 28.1
Thhalv10025947m.g Eutrema salsugineum HOM05D001115 ORTHO05D001023 2.9e-06 56.6 128 25.8
Manes.12G040500 Manihot esculenta HOM05D001115 ORTHO05D001023 2.9e-06 56.6 117 28.2
arahy.Tifrunner.gnm1.ann1.UVUE9D Arachis hypogaea HOM05D001115 ORTHO05D001023 3.8e-06 56.2 155 29.7
AUR62037360 Chenopodium quinoa HOM05D001115 ORTHO05D001023 3.8e-06 56.2 125 24.8
COL.COLO4_07553 Corchorus olitorius HOM05D001115 ORTHO05D001023 3.8e-06 56.2 151 25.8
Dinv19245 Davidia involucrata HOM05D001115 ORTHO05D001023 3.8e-06 56.2 143 25.9
Medtr1g069185 Medicago truncatula HOM05D001115 ORTHO05D001023 3.8e-06 56.2 162 27.2
Rhsim02G0127800 Rhododendron simsii HOM05D001115 ORTHO05D001023 3.8e-06 56.2 176 25.6
SEGI_39764 Sequoiadendron giganteum HOM05D001115 ORTHO05D001023 3.8e-06 56.2 101 31.7
PGSC0003DMG400018947 Solanum tuberosum HOM05D001115 ORTHO05D001023 3.8e-06 56.2 117 27.4
THA.LOC104814499 Tarenaya hassleriana HOM05D001115 ORTHO05D001023 3.8e-06 56.2 115 27.8
Thhalv10002082m.g Eutrema salsugineum HOM05D001115 ORTHO05D001023 4.9e-06 55.8 113 27.4
Gohir.A08G192700 Gossypium hirsutum HOM05D001115 ORTHO05D001023 4.9e-06 55.8 142 24.6
Mapoly0116s0051 Marchantia polymorpha HOM05D001115 ORTHO05D001023 4.9e-06 55.8 131 28.2
Solyc09g063070.3 Solanum lycopersicum HOM05D001115 ORTHO05D001023 4.9e-06 55.8 117 26.5
Sopen09g025240 Solanum pennellii HOM05D001115 ORTHO05D001023 4.9e-06 55.8 117 26.5
GSVIVG01002019001 Vitis vinifera HOM05D001115 ORTHO05D001023 4.9e-06 55.8 142 24.6
CiPaw.03G175400 Carya illinoinensis HOM05D001115 ORTHO05D001023 6.4e-06 55.5 141 25.5
Gorai.004G223400 Gossypium raimondii HOM05D001115 ORTHO05D001023 6.4e-06 55.5 142 24.6
SEGI_17552 Sequoiadendron giganteum HOM05D001115 ORTHO05D001023 6.4e-06 55.5 147 26.5
Solyc07g054160.3 Solanum lycopersicum HOM05D001115 ORTHO05D001023 6.4e-06 55.5 116 25.9
Sopen07g028090 Solanum pennellii HOM05D001115 ORTHO05D001023 6.4e-06 55.5 116 25.9
TWI59G0887 Tripterygium wilfordii HOM05D001115 ORTHO05D001023 6.4e-06 55.5 113 27.4
Thecc.02G177800 Theobroma cacao HOM05D001115 ORTHO05D001023 8.4e-06 55.1 113 27.4


User provided reference genes

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