Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 0.0e+00 3087.0 1555 100.0
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 8.3e-190 669.1 1051 42.1
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 8.1e-177 625.9 1024 41.0
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 1.3e-169 602.1 1049 37.7
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 6.2e-169 599.7 1046 38.0
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 8.4e-166 589.3 1103 36.7
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 5.3e-160 570.1 1036 37.6
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 8.1e-153 546.2 1055 36.3
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 3.1e-152 544.3 1046 35.7
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 2.5e-149 534.6 1036 36.6
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 6.7e-147 526.6 1038 36.6
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 3.1e-144 517.7 1033 35.8
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 1.4e-141 508.8 1045 34.7
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.5e-138 498.0 1045 34.8
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 9.7e-138 496.1 1050 35.5
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 2.2e-137 495.0 1048 34.6
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 3.7e-137 494.2 1048 34.3
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 5.5e-133 480.3 977 35.5
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.6e-132 478.8 1181 32.5
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 1.3e-129 469.2 1043 34.2
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 3.7e-129 467.6 1035 34.4
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.4e-128 465.7 1036 34.2
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 7.7e-127 459.9 1031 33.9
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 3.2e-125 454.5 1050 32.1
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 2.6e-119 434.9 1008 33.8
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 2.9e-118 431.4 1043 33.7
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 3.2e-117 427.9 1006 33.9
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 2.1e-116 425.2 1044 32.8
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 3.6e-116 424.5 1007 33.8
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 8.0e-116 423.3 1056 32.4
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 8.8e-115 419.9 1054 32.3
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 4.8e-113 414.1 1048 32.3
Gohir.D07G026600 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.3e-112 410.6 974 33.4
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 1.1e-109 402.9 811 36.4
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.3e-105 389.4 1088 30.5
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 6.3e-97 360.5 1044 30.9
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 2.4e-96 358.6 1006 31.0
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 1.0e-94 353.2 1005 30.9
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 2.6e-90 338.6 1029 29.9
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 4.4e-90 337.8 867 32.1
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 7.8e-79 300.4 1083 28.1
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.0e-78 300.1 1027 28.2
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 2.2e-73 282.3 1000 28.9
vmacro05366 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 4.9e-73 281.2 1021 28.9
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.5e-66 259.6 976 27.6
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 2.9e-65 255.4 976 28.0
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 6.4e-65 254.2 1033 26.6
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 1.6e-63 249.6 980 27.7
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 2.1e-60 239.2 1021 27.3
Sed0002796 Sechium edule HOM05D004021 ORTHO05D003767 4.0e-59 235.0 1015 25.8
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 3.4e-58 231.9 1046 26.6
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 1.1e-56 226.9 1029 26.7
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 1.4e-56 226.5 1032 27.1
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 2.4e-56 225.7 947 27.6
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 2.4e-56 225.7 1012 27.9
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 7.1e-56 224.2 1021 25.8
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 9.3e-56 223.8 968 26.0
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 9.3e-56 223.8 1023 27.0
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 1.2e-55 223.4 939 27.4
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 3.5e-55 221.9 974 26.3
Cpa.g.sc7.255 Carica papaya HOM05D004021 ORTHO05D003767 4.6e-55 221.5 585 32.1
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 1.0e-54 220.3 1027 27.4
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 2.3e-54 219.2 1049 26.8
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 8.7e-54 217.2 1033 26.1
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 3.3e-53 215.3 1044 26.5
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 2.1e-52 212.6 1028 26.3
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 4.8e-52 211.5 1030 26.6
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 6.2e-52 211.1 1035 26.0
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 1.1e-51 210.3 1027 25.4
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 1.8e-51 209.5 943 26.9
MELO3C011152.2 Cucumis melo HOM05D004021 ORTHO05D003767 8.4e-49 200.7 1039 25.7
ClCG11G015210 Citrullus lanatus HOM05D004021 ORTHO05D003767 3.5e-47 195.3 921 26.5
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 6.0e-47 194.5 1007 25.6
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 1.8e-46 193.0 804 27.0
ClCG08G012320 Citrullus lanatus HOM05D004021 ORTHO05D003767 2.3e-46 192.6 1015 24.3
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 3.0e-46 192.2 946 26.5
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 5.6e-45 188.0 889 27.8
FAN20G1338 Fragaria x ananassa HOM05D004021 ORTHO05D003767 7.4e-45 187.6 434 33.9
FAN09G3084 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.6e-44 186.4 434 33.6
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.4e-43 183.3 895 26.7
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.8e-43 183.0 814 27.3
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 4.0e-43 181.8 993 25.6
FAN02G4319 Fragaria x ananassa HOM05D004021 ORTHO05D003767 9.0e-43 180.6 431 33.4
CsaV3_2G030990 Cucumis sativus L. HOM05D004021 ORTHO05D003767 3.4e-42 178.7 973 25.7
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.5e-42 178.3 862 26.9
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 3.8e-41 175.3 983 26.0
FAN13G2039 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.4e-40 173.3 364 35.2
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 5.5e-40 171.4 859 26.8
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 7.1e-40 171.0 996 24.5
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.6e-39 169.9 875 26.5
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 1.6e-39 169.9 898 27.2
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 3.5e-39 168.7 899 25.9
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 6.0e-39 167.9 898 27.2
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 7.9e-39 167.5 965 25.9
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 1.0e-38 167.2 864 27.1
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.0e-38 167.2 243 41.2
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 1.3e-38 166.8 996 25.7
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 5.1e-38 164.9 993 26.0
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 8.7e-38 164.1 940 25.5
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 4.3e-37 161.8 991 25.1
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 4.3e-37 161.8 997 24.2
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 1.6e-36 159.8 930 24.8
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 1.6e-36 159.8 930 24.8
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 3.7e-36 158.7 906 26.5
FAN20G0872 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.4e-35 156.8 295 36.3
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 9.0e-35 154.1 932 24.7
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 1.2e-34 153.7 957 25.5
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 2.6e-34 152.5 928 23.9
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 2.6e-34 152.5 928 23.9
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 3.4e-34 152.1 780 26.3
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 2.2e-33 149.4 860 25.7
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 2.2e-33 149.4 934 23.9
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 2.2e-33 149.4 906 24.6
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 4.2e-32 145.2 785 26.9
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.2e-31 143.7 1030 22.7
Sc09g0009160 Simmondsia chinensis HOM05D012164 ORTHO05D003767 3.5e-31 142.1 807 25.8
TAR626G0792 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.9e-29 136.3 340 31.5
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 2.1e-28 132.9 114 52.6
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 8.2e-28 131.0 209 41.6
PSO782G1327 Papaver somniferum HOM05D004021 ORTHO05D003767 5.9e-26 124.8 953 23.1
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 7.6e-26 124.4 939 23.4
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 7.6e-26 124.4 850 24.0
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 2.2e-25 122.9 897 25.5
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 1.1e-24 120.6 880 23.1
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 1.1e-24 120.6 880 23.1
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 1.9e-24 119.8 880 23.0
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 2.5e-24 119.4 969 23.5
TAR626G1566 Trochodendron aralioides HOM05D004021 ORTHO05D003767 3.2e-24 119.0 311 31.8
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.1e-23 116.3 485 27.2
Eucgr.E03518 Eucalyptus grandis HOM05D004021 ORTHO05D003767 2.7e-23 115.9 439 28.0
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 2.7e-23 115.9 917 22.8
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 1.3e-22 113.6 917 22.6
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 8.2e-20 104.4 878 21.9
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 6.9e-19 101.3 867 22.8
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 6.9e-19 101.3 920 22.0
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 1.2e-18 100.5 137 41.6
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 2.0e-18 99.8 868 22.7
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 2.0e-18 99.8 142 36.6
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 4.5e-18 98.6 1013 22.5
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 7.7e-18 97.8 910 21.6
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 7.7e-18 97.8 151 39.1
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 2.2e-17 96.3 107 48.6
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 2.9e-17 95.9 989 22.2
AUR62043520 Chenopodium quinoa HOM05D012164 ORTHO05D003767 5.0e-17 95.1 872 23.1
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 5.0e-17 95.1 889 22.3
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 1.1e-16 94.0 917 22.2
Dinv38014 Davidia involucrata HOM05D004021 ORTHO05D003767 1.9e-16 93.2 780 22.8
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.2e-16 92.4 506 24.7
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 4.2e-16 92.0 156 34.0
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 4.2e-16 92.0 171 33.3
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 5.5e-16 91.7 187 33.2
Lj8P589T23 Lonicera japonica HOM05D004021 ORTHO05D003767 7.2e-16 91.3 115 45.2
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 2.1e-15 89.7 81 48.1
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 1.8e-14 86.7 713 22.7
Lj8P589T28 Lonicera japonica HOM05D004021 ORTHO05D003767 8.8e-14 84.3 370 27.3
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 2.0e-13 83.2 103 40.8
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 3.3e-13 82.4 70 52.9
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 4.4e-13 82.0 96 42.7
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 9.7e-13 80.9 460 24.6
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 3.7e-12 79.0 79 45.6
Atru.chr7.2139 Acer truncatum HOM05D004021 ORTHO05D003767 6.3e-12 78.2 117 35.0
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 6.3e-12 78.2 612 21.9
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 1.8e-11 76.6 91 39.6
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 2.4e-11 76.3 92 40.2
SEGI_37840 Sequoiadendron giganteum HOM05D028836 ORTHO05D003767 1.5e-10 73.6 102 37.3
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 2.0e-10 73.2 168 35.1
ECA233G1986 Erigeron canadensis HOM05D004021 ORTHO05D003767 4.5e-10 72.0 876 22.1
SEGI_38675 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 2.9e-09 69.3 132 34.1
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 8.5e-09 67.8 87 42.5
Dinv30475 Davidia involucrata HOM05D024977 ORTHO05D003767 5.5e-08 65.1 356 25.0
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 1.6e-07 63.5 59 54.2
Rhsim08G0224000 Rhododendron simsii HOM05D004021 ORTHO05D003767 2.7e-07 62.8 249 27.7
Dinv30474 Davidia involucrata HOM05D004021 ORTHO05D003767 3.6e-07 62.4 375 25.9
unitig_85.g27153 Utricularia gibba HOM05D004021 ORTHO05D003767 3.6e-07 62.4 226 26.5
SEGI_32539 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 2.3e-06 59.7 56 46.4
Lalb_Chr22g0352251 Lupinus albus HOM05D004021 ORTHO05D003767 3.9e-06 58.9 213 27.2
Dinv10761 Davidia involucrata HOM05D024977 ORTHO05D003767 6.7e-06 58.2 57 50.9
Dinv30643 Davidia involucrata HOM05D024977 ORTHO05D003767 6.7e-06 58.2 57 50.9
Cpa.g.sc7.256 Carica papaya HOM05D004021 ORTHO05D003767 8.8e-06 57.8 166 25.3
Os01g0229300 Oryza sativa ssp. japonica HOM05D018893 ORTHO05D020945 8.8e-06 57.8 435 23.2


User provided reference genes

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