Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.5e-98 362.1 181 100.0
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 7.7e-71 270.8 165 78.8
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 1.3e-70 270.0 191 69.1
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 3.8e-70 268.5 180 71.7
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 1.9e-69 266.2 182 70.9
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 2.5e-69 265.8 180 71.1
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 4.2e-69 265.0 165 77.0
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 5.5e-69 264.6 187 72.7
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 5.5e-69 264.6 187 72.7
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 5.5e-69 264.6 189 69.3
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 9.4e-69 263.8 169 74.0
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 2.1e-68 262.7 184 70.1
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 4.7e-68 261.5 169 73.4
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.4e-67 260.0 178 69.7
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.4e-67 260.0 165 74.5
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.4e-67 260.0 161 75.2
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 1.4e-67 260.0 165 76.4
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.4e-67 260.0 168 73.8
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 3.0e-67 258.8 168 75.6
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.9e-67 258.5 169 72.2
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 3.9e-67 258.5 165 75.8
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 6.7e-67 257.7 168 73.2
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 8.8e-67 257.3 200 65.5
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.1e-66 256.9 178 70.2
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.5e-66 256.5 167 72.5
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 2.6e-66 255.8 165 73.3
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 2.6e-66 255.8 169 73.4
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 4.4e-66 255.0 168 69.6
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 5.7e-66 254.6 165 72.1
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 7.4e-66 254.2 169 71.0
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.3e-65 253.4 165 75.2
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.2e-65 252.7 165 71.5
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 2.8e-65 252.3 165 70.9
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 3.7e-65 251.9 186 67.7
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 3.7e-65 251.9 160 75.0
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 3.7e-65 251.9 165 70.9
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 6.3e-65 251.1 165 72.1
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.4e-64 249.2 193 66.3
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.1e-64 248.8 165 70.3
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 5.3e-64 248.1 165 70.9
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 7.0e-64 247.7 158 74.7
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 1.2e-63 246.9 168 69.0
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 2.6e-63 245.7 165 69.7
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 3.5e-63 245.4 165 70.9
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 3.5e-63 245.4 165 68.5
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 5.9e-63 244.6 165 70.9
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 7.7e-63 244.2 164 67.1
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.7e-62 243.0 189 64.0
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 2.2e-62 242.7 161 70.2
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 2.9e-62 242.3 152 77.6
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 5.0e-62 241.5 165 70.3
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 5.0e-62 241.5 165 70.3
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 6.5e-62 241.1 165 69.7
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 6.5e-62 241.1 194 63.4
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 6.5e-62 241.1 163 71.8
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 8.5e-62 240.7 165 69.7
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 1.5e-61 240.0 158 70.3
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 2.5e-61 239.2 165 69.7
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.2e-61 238.8 165 69.7
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 3.2e-61 238.8 165 70.3
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 9.4e-61 237.3 165 69.7
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 9.4e-61 237.3 165 68.5
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 2.7e-60 235.7 158 72.2
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 3.6e-60 235.3 165 67.9
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 6.1e-60 234.6 158 71.5
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 6.1e-60 234.6 159 71.1
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 2.3e-59 232.6 152 73.0
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 4.4e-58 228.4 165 65.5
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 7.5e-58 227.6 168 64.9
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 8.3e-57 224.2 152 72.4
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 2.4e-56 222.6 173 65.3
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 3.1e-56 222.2 152 69.7
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 4.1e-56 221.9 148 71.6
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 7.0e-56 221.1 138 76.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 1.6e-55 219.9 166 62.7
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 1.3e-54 216.9 179 60.3
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 6.5e-54 214.5 165 65.5
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 2.3e-51 206.1 160 60.0
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.5e-50 203.4 171 59.1
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.7e-49 199.9 172 52.3
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.7e-49 199.9 244 45.5
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 3.7e-49 198.7 144 66.0
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.6e-47 193.4 185 55.1
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 1.0e-46 190.7 152 63.8
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 8.6e-46 187.6 158 56.3
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.1e-45 187.2 119 73.9
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 2.5e-45 186.0 125 68.8
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 1.4e-43 180.3 161 51.6
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 4.0e-43 178.7 158 50.6
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 2.6e-42 176.0 140 62.9
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.1e-40 169.1 132 57.6
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 2.0e-39 166.4 152 59.2
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 2.9e-38 162.5 173 46.8
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 1.5e-37 160.2 114 65.8
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 2.5e-37 159.5 109 68.8
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 3.6e-36 155.6 97 74.2
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 1.0e-35 154.1 131 55.7
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 1.0e-35 154.1 118 65.3
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.2e-34 150.6 97 73.2
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.2e-34 150.6 134 58.2
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.8e-34 148.3 103 68.0
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 9.8e-34 147.5 103 68.0
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 9.8e-34 147.5 154 47.4
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 2.2e-33 146.4 98 72.4
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 4.9e-33 145.2 103 64.1
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.9e-32 143.3 88 77.3
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 7.0e-32 141.4 103 68.9
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 4.3e-29 132.1 97 66.0
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.6e-26 122.9 130 53.1
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.3e-25 120.6 75 80.0
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 7.8e-23 111.3 73 72.6
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 6.6e-22 108.2 138 42.0
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 8.6e-22 107.8 155 33.5
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 7.1e-16 88.2 68 57.4
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 9.2e-16 87.8 59 64.4
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 6.0e-15 85.1 49 83.7
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 5.2e-11 72.0 49 67.3
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 4.6e-07 58.9 36 77.8


User provided reference genes

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