Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 1.4e-110 402.9 198 100.0
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.5e-59 233.4 169 68.6
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 2.5e-59 232.6 190 63.2
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 4.8e-58 228.4 167 65.3
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 4.8e-58 228.4 194 63.4
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 6.3e-58 228.0 174 64.9
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 8.2e-58 227.6 174 65.5
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.1e-57 227.3 122 83.6
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.8e-57 226.5 174 66.7
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 3.1e-57 225.7 147 72.8
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 3.1e-57 225.7 181 63.5
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 4.1e-57 225.3 166 67.5
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 9.0e-57 224.2 171 64.9
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 9.0e-57 224.2 163 68.7
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.2e-56 223.8 166 66.9
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 1.5e-56 223.4 166 66.9
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 2.6e-56 222.6 149 70.5
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.6e-56 222.6 180 64.4
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 4.5e-56 221.9 183 63.9
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.0e-55 220.7 180 61.7
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 1.0e-55 220.7 193 60.6
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.3e-55 220.3 175 64.6
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.7e-55 219.9 157 67.5
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 2.9e-55 219.2 150 70.7
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 2.9e-55 219.2 165 64.8
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 2.9e-55 219.2 157 69.4
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 5.0e-55 218.4 120 80.8
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 5.0e-55 218.4 119 83.2
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 5.0e-55 218.4 177 61.6
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 5.0e-55 218.4 178 64.0
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 6.5e-55 218.0 187 57.8
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 8.4e-55 217.6 183 61.2
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.1e-54 217.2 160 66.9
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.1e-54 217.2 139 71.9
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 1.4e-54 216.9 148 69.6
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.4e-54 216.9 175 62.9
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 1.4e-54 216.9 200 56.5
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 1.9e-54 216.5 119 82.4
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.9e-54 216.5 175 62.3
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.9e-54 216.5 164 65.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.9e-54 216.5 150 68.7
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 2.5e-54 216.1 164 62.8
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 2.5e-54 216.1 169 62.7
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 2.5e-54 216.1 200 55.5
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 2.5e-54 216.1 129 77.5
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 2.5e-54 216.1 187 61.5
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 3.2e-54 215.7 184 60.9
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 3.2e-54 215.7 176 65.3
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 4.2e-54 215.3 149 69.1
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 4.2e-54 215.3 179 62.6
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 5.5e-54 214.9 121 80.2
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 7.2e-54 214.5 169 64.5
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 7.2e-54 214.5 149 71.1
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 9.3e-54 214.2 146 67.1
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 9.3e-54 214.2 159 67.9
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 9.3e-54 214.2 138 72.5
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 9.3e-54 214.2 154 66.9
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 9.3e-54 214.2 167 62.9
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.2e-53 213.8 147 66.0
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.6e-53 213.4 167 62.3
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 1.6e-53 213.4 149 68.5
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 2.1e-53 213.0 180 61.7
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 2.1e-53 213.0 156 67.9
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.7e-53 212.6 147 69.4
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 3.5e-53 212.2 117 80.3
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 4.6e-53 211.8 144 68.1
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 6.1e-53 211.5 188 58.0
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 6.1e-53 211.5 143 69.9
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 6.1e-53 211.5 159 63.5
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 7.9e-53 211.1 185 59.5
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 7.9e-53 211.1 170 61.8
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.0e-52 210.7 153 66.7
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 1.0e-52 210.7 117 80.3
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.3e-52 210.3 138 69.6
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.3e-52 210.3 163 63.8
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.3e-52 210.3 117 79.5
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 1.3e-52 210.3 116 81.0
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 1.8e-52 209.9 147 64.6
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 1.8e-52 209.9 147 64.6
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.8e-52 209.9 138 71.7
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 3.9e-52 208.8 140 71.4
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 3.9e-52 208.8 182 59.9
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 5.1e-52 208.4 138 71.0
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 6.7e-52 208.0 188 59.6
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 6.7e-52 208.0 144 68.1
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 8.7e-52 207.6 177 61.0
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 8.7e-52 207.6 182 58.8
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 4.3e-51 205.3 167 61.7
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.8e-50 202.6 125 74.4
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 1.0e-47 194.1 144 63.2
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 2.9e-47 192.6 184 51.6
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 3.8e-47 192.2 139 67.6
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 5.0e-47 191.8 123 69.1
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 1.4e-46 190.3 185 51.9
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 2.5e-46 189.5 155 62.6
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.2e-45 187.2 126 68.3
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 6.1e-45 184.9 152 59.2
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 3.0e-44 182.6 123 67.5
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 8.2e-42 174.5 166 57.8
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 2.4e-41 172.9 159 54.7
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 4.1e-41 172.2 170 53.5
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 5.0e-39 165.2 188 55.3
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 4.2e-38 162.2 99 72.7
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 3.6e-37 159.1 143 53.8
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 8.8e-36 154.5 137 51.8
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 5.7e-35 151.8 124 58.1
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 1.7e-34 150.2 129 55.0
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 3.1e-25 119.4 114 56.1
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.2e-24 117.5 87 62.1
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.6e-24 117.1 87 62.1
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.7e-23 113.6 68 76.5
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 6.5e-23 111.7 75 66.7
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 2.1e-21 106.7 132 45.5
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 2.6e-19 99.8 115 44.3
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 9.1e-17 91.3 87 54.0
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 3.7e-10 69.3 69 53.6
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.7e-07 60.5 59 52.5


User provided reference genes

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