Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 5.6e-164 580.9 291 100.0
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 1.2e-102 377.1 377 58.6
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.3e-96 357.1 405 53.8
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 2.5e-95 352.8 343 58.0
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 5.7e-92 341.7 396 51.5
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 8.2e-91 337.8 397 49.1
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 1.4e-90 337.0 398 52.5
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 1.8e-90 336.7 406 49.5
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 2.4e-90 336.3 395 51.4
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 4.1e-90 335.5 406 49.3
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 2.0e-89 333.2 410 49.8
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.6e-89 332.8 407 48.9
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 1.3e-88 330.5 411 47.7
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 4.0e-85 318.9 408 50.2
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 7.5e-84 314.7 406 49.8
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 1.4e-82 310.5 415 48.9
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 9.1e-82 307.8 413 48.9
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 2.5e-79 299.7 423 45.9
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 9.4e-79 297.7 389 47.8
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 6.1e-78 295.0 404 46.8
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 1.4e-77 293.9 361 48.5
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 2.3e-77 293.1 425 47.8
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 3.0e-77 292.7 409 48.4
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 6.8e-77 291.6 442 48.4
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 8.8e-77 291.2 417 47.5
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 4.4e-76 288.9 413 48.9
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.3e-75 287.3 413 48.9
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.2e-75 286.6 413 48.7
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 8.3e-75 284.6 415 48.2
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 1.4e-74 283.9 344 48.0
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 7.0e-74 281.6 378 45.8
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.2e-73 280.8 419 45.6
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.0e-73 280.0 411 47.2
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 5.0e-72 275.4 405 45.4
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 3.3e-71 272.7 393 45.8
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 5.5e-71 271.9 404 43.8
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 7.2e-71 271.6 369 48.8
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 9.5e-71 271.2 369 48.8
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.7e-67 260.4 393 44.5
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 1.4e-66 257.3 322 49.4
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.1e-66 255.8 369 46.3
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 1.6e-65 253.8 411 41.4
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.5e-65 252.7 380 46.1
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 1.3e-64 250.8 413 41.4
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 1.3e-64 250.8 398 42.0
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 3.9e-64 249.2 344 47.1
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 3.9e-64 249.2 384 42.2
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 1.4e-61 240.7 398 40.2
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 8.9e-61 238.0 399 43.6
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 9.8e-60 234.6 356 43.5
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.0e-56 224.6 285 51.6
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 3.0e-56 223.0 409 43.3
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 8.6e-56 221.5 386 38.1
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 5.6e-55 218.8 362 40.3
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 9.5e-55 218.0 382 39.3
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.2e-54 217.6 362 39.0
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 1.6e-54 217.2 205 60.5
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 4.7e-54 215.7 201 60.2
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 4.7e-54 215.7 385 39.0
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 8.0e-54 214.9 304 44.1
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 1.1e-53 214.5 369 42.0
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.8e-53 213.8 447 39.6
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 3.1e-53 213.0 199 57.3
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 8.9e-53 211.5 453 38.2
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 8.9e-53 211.5 356 44.7
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 8.9e-53 211.5 370 40.5
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 1.3e-51 207.6 348 41.7
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 2.2e-51 206.8 334 40.4
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 6.0e-49 198.7 160 60.6
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 1.5e-47 194.1 393 40.5
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 4.7e-46 189.1 420 37.4
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 6.2e-46 188.7 422 37.2
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.2e-44 184.5 378 36.8
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 3.4e-44 183.0 395 34.7
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 7.5e-44 181.8 400 40.2
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 9.9e-44 181.4 375 40.8
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-43 181.0 375 38.1
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.1e-42 177.9 340 40.0
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 2.7e-41 173.3 330 39.7
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.5e-39 166.8 346 35.8
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 3.3e-39 166.4 362 38.4
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 9.6e-39 164.9 317 38.8
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 3.6e-38 162.9 377 36.6
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 2.4e-37 160.2 325 38.2
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 6.8e-37 158.7 119 63.0
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 6.4e-35 152.1 395 37.7
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 7.1e-34 148.7 404 30.4
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 2.1e-33 147.1 330 37.6
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 3.5e-33 146.4 293 37.2
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 4.6e-33 146.0 344 35.2
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 6.0e-33 145.6 128 60.9
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 7.8e-33 145.2 371 34.8
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 1.5e-31 141.0 310 37.4
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 1.8e-29 134.0 448 30.4
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 9.0e-29 131.7 320 36.6
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 9.0e-29 131.7 320 36.6
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 4.4e-28 129.4 328 38.7
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 4.4e-28 129.4 320 37.2
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 2.2e-27 127.1 341 34.9
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 4.9e-27 125.9 275 38.9
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 4.9e-27 125.9 275 38.9
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.9e-26 124.0 369 31.2
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 4.2e-26 122.9 317 35.3
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 1.6e-25 120.9 301 33.9
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 2.1e-25 120.6 317 35.0
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.0e-24 118.2 314 36.3
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 1.0e-24 118.2 318 35.2
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 5.1e-24 115.9 321 36.8
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 6.6e-24 115.5 275 36.7
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 8.7e-24 115.2 301 35.2
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 8.7e-24 115.2 275 37.5
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 1.1e-23 114.8 308 36.0
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 1.5e-23 114.4 275 37.5
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 1.5e-23 114.4 275 37.5
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 3.3e-23 113.2 325 34.8
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 3.3e-23 113.2 301 33.2
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 4.3e-23 112.8 110 50.0
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.3e-22 111.3 336 33.6
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 2.8e-22 110.2 108 64.8
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 8.1e-22 108.6 368 26.6
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 1.1e-21 108.2 288 34.0
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 6.9e-21 105.5 164 43.3
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 9.0e-21 105.1 271 35.8
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 5.8e-20 102.4 109 64.2
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 7.6e-20 102.1 266 33.8
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 5.4e-18 95.9 230 38.3
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 5.1e-16 89.4 261 29.9
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 8.7e-16 88.6 330 30.6
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 3.3e-15 86.7 164 33.5
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 3.3e-15 86.7 130 50.0
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 5.6e-15 85.9 305 28.2
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 4.8e-14 82.8 163 35.6
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 1.1e-13 81.6 146 41.1
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 4.0e-13 79.7 259 30.9
unitig_0.g2816 Utricularia gibba HOM05D005213 ORTHO05D006229 5.3e-13 79.3 266 30.5
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.6e-12 77.0 158 30.4
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 2.2e-11 73.9 319 29.2
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.9e-11 72.8 251 27.9
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 6.5e-11 72.4 293 30.7
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 8.4e-11 72.0 44 65.9
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 6.0e-09 65.9 37 94.6
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 7.9e-09 65.5 333 27.3
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 1.0e-08 65.1 220 27.3
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 2.1e-06 57.4 306 26.1


User provided reference genes

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