Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 1.4e-270 935.6 452 100.0
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 7.0e-230 800.4 486 82.1
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.8e-225 785.8 486 80.2
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 1.5e-224 782.7 486 80.0
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 2.2e-223 778.9 486 78.6
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 6.3e-223 777.3 486 79.0
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 6.5e-220 767.3 486 77.6
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.5e-219 766.1 486 77.6
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.9e-219 765.8 486 78.8
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 3.2e-219 765.0 485 78.1
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 6.1e-218 760.8 486 77.0
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.0e-217 760.0 486 76.5
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 2.0e-216 755.7 488 77.0
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 3.4e-216 755.0 486 77.4
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 7.5e-216 753.8 486 76.3
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 9.8e-216 753.4 486 77.0
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 3.7e-215 751.5 485 76.5
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 1.4e-214 749.6 489 76.7
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 1.4e-214 749.6 487 76.6
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.8e-214 749.2 485 76.7
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 1.2e-213 746.5 487 77.4
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.2e-213 746.5 486 76.7
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 2.0e-213 745.7 485 76.7
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.7e-213 745.3 486 76.3
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 2.7e-213 745.3 487 77.0
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.9e-213 744.2 486 76.3
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 5.9e-213 744.2 485 75.5
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 3.8e-212 741.5 486 75.9
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 6.5e-212 740.7 486 76.5
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.6e-212 740.3 486 75.9
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.9e-211 739.2 487 74.7
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 2.5e-211 738.8 487 76.4
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 4.2e-211 738.0 486 76.1
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 5.5e-211 737.6 487 76.2
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.2e-210 736.5 486 75.5
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 2.1e-210 735.7 487 76.0
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 8.0e-210 733.8 485 74.6
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.3e-209 732.3 485 74.2
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 2.3e-209 732.3 517 71.6
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 3.0e-209 731.9 486 74.7
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 5.2e-209 731.1 495 74.5
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 8.9e-209 730.3 486 75.9
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 1.2e-208 729.9 487 74.9
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 2.0e-208 729.2 486 74.9
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 3.4e-208 728.4 486 74.3
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 4.4e-208 728.0 486 74.7
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 5.7e-208 727.6 486 74.5
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.3e-207 726.5 486 74.5
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 2.2e-207 725.7 486 73.7
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.2e-207 725.7 486 74.1
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.2e-207 725.7 486 74.1
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 2.2e-207 725.7 487 75.4
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.7e-207 724.9 486 73.9
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 8.3e-207 723.8 486 75.1
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.8e-206 722.6 493 72.6
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.4e-206 722.2 486 74.1
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 3.1e-206 721.8 486 73.9
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.2e-205 719.9 486 74.9
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 1.2e-205 719.9 489 74.8
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.6e-205 719.5 486 74.7
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 2.0e-205 719.2 487 73.5
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 2.9e-204 715.3 488 75.0
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.8e-204 714.9 486 73.0
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 5.0e-204 714.5 485 74.0
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 6.6e-204 714.1 486 74.3
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 9.5e-203 710.3 491 73.7
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.8e-201 706.1 484 73.3
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 6.8e-201 704.1 489 72.8
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.8e-201 704.1 491 73.3
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.5e-200 703.0 486 72.0
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 2.6e-200 702.2 496 72.0
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 2.6e-200 702.2 488 73.2
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 4.4e-200 701.4 415 81.9
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 1.7e-199 699.5 487 72.5
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 2.9e-199 698.7 487 72.1
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 2.9e-199 698.7 486 72.6
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 3.7e-199 698.4 484 71.9
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 4.9e-199 698.0 489 71.8
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 4.9e-199 698.0 490 72.2
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.1e-198 696.8 490 72.0
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.8e-198 696.0 503 69.8
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 5.4e-198 694.5 487 72.1
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.6e-197 693.0 488 71.9
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 2.7e-197 692.2 486 71.6
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.7e-196 689.5 487 71.5
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 3.0e-196 688.7 490 69.8
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 6.2e-194 681.0 490 71.6
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 6.2e-194 681.0 490 71.6
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 4.0e-193 678.3 486 70.2
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 5.2e-193 677.9 486 71.6
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 8.3e-191 670.6 392 82.4
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 8.3e-191 670.6 488 70.9
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.1e-190 670.2 395 81.8
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 1.4e-190 669.8 395 81.8
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-189 666.8 396 81.3
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-189 666.8 396 80.8
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 4.6e-189 664.8 393 81.4
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 8.6e-188 660.6 486 69.1
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 1.9e-182 642.9 428 74.1
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 2.4e-182 642.5 449 72.8
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 9.2e-174 614.0 429 69.5
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.0e-172 610.5 391 73.1
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 3.9e-172 608.6 487 63.9
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.5e-171 605.9 396 75.3
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 4.9e-167 591.7 463 64.4
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 3.2e-166 589.0 389 72.0
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 1.0e-164 583.9 386 74.4
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 4.6e-157 558.5 401 67.3
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-153 547.4 435 66.0
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 1.2e-149 533.9 486 60.1
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 2.5e-147 526.2 402 61.2
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 3.7e-146 522.3 389 62.2
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 3.4e-144 515.8 263 93.5
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.3e-143 513.8 263 92.8
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.4e-120 436.0 347 65.1
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.4e-113 413.3 366 57.4
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.9e-82 310.1 172 84.3
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.7e-82 309.7 237 66.2
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 6.4e-82 308.9 262 61.5
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.6e-61 240.0 135 85.9
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.2e-58 230.7 136 80.9
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.1e-56 224.2 177 62.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 1.4e-52 211.5 161 68.3
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.1e-49 201.8 140 74.3
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 1.3e-42 178.3 97 83.5
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 6.2e-37 159.5 94 83.0
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 6.0e-32 142.9 105 66.7
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 7.2e-09 66.2 266 27.1


User provided reference genes

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