Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 4.6e-71 271.2 140 100.0
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.9e-32 142.9 91 76.9
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.3e-32 140.6 91 75.8
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 2.1e-31 139.4 91 74.7
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 2.7e-31 139.0 91 78.0
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 3.5e-31 138.7 91 76.9
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 4.6e-31 138.3 91 73.6
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 4.6e-31 138.3 91 72.5
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.3e-30 136.7 91 72.5
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 1.3e-30 136.7 91 71.4
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 1.8e-30 136.3 91 75.8
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.3e-30 136.0 91 71.4
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.3e-30 136.0 91 71.4
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 2.3e-30 136.0 91 74.7
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 3.0e-30 135.6 91 73.6
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.1e-29 133.7 92 71.7
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.5e-29 133.3 91 70.3
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 2.5e-29 132.5 92 71.7
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.5e-29 132.5 93 72.0
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.5e-29 132.5 93 72.0
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 3.3e-29 132.1 89 71.9
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 4.3e-29 131.7 91 71.4
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 5.6e-29 131.3 91 70.3
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 7.4e-29 131.0 88 73.9
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 7.4e-29 131.0 91 72.5
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 9.6e-29 130.6 91 72.5
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-28 130.2 89 71.9
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.3e-28 130.2 116 64.7
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.3e-28 130.2 116 64.7
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 1.3e-28 130.2 88 76.1
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.3e-28 130.2 91 70.3
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.3e-28 130.2 113 62.8
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.6e-28 129.8 91 73.6
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.1e-28 129.4 91 70.3
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.6e-28 128.6 91 73.6
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 4.8e-28 128.3 91 68.1
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 6.2e-28 127.9 92 73.9
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 6.2e-28 127.9 89 71.9
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.1e-28 127.5 88 71.6
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.1e-27 127.1 91 64.8
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 1.1e-27 127.1 118 59.3
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.1e-27 127.1 92 70.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 1.4e-27 126.7 92 71.7
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.4e-27 126.7 92 70.7
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.8e-27 126.3 91 68.1
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 1.8e-27 126.3 92 72.8
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 2.4e-27 125.9 92 72.8
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 2.4e-27 125.9 91 69.2
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.0e-27 125.2 92 71.7
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.3e-27 124.8 92 71.7
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 5.3e-27 124.8 91 69.2
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 6.9e-27 124.4 91 67.0
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 6.9e-27 124.4 91 67.0
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 6.9e-27 124.4 91 69.2
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 9.0e-27 124.0 120 60.8
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 1.2e-26 123.6 92 69.6
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.2e-26 123.6 92 70.7
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.5e-26 123.2 120 58.3
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 2.0e-26 122.9 89 67.4
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 2.0e-26 122.9 88 68.2
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 3.4e-26 122.1 93 68.8
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 5.8e-26 121.3 92 69.6
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 5.8e-26 121.3 90 64.4
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.3e-25 120.2 91 68.1
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 1.3e-25 120.2 89 67.4
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.2e-25 119.4 91 63.7
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 2.2e-25 119.4 91 64.8
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 2.2e-25 119.4 91 64.8
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.9e-25 119.0 91 63.7
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 2.9e-25 119.0 91 62.6
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 2.9e-25 119.0 91 62.6
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 2.9e-25 119.0 118 55.9
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 3.8e-25 118.6 92 68.5
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.4e-25 117.9 111 57.7
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 6.4e-25 117.9 89 66.3
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 6.4e-25 117.9 91 67.0
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 8.4e-25 117.5 91 64.8
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 8.4e-25 117.5 91 64.8
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 8.4e-25 117.5 91 63.7
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 1.1e-24 117.1 91 64.8
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.1e-24 117.1 91 62.6
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.1e-24 117.1 99 63.6
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 1.4e-24 116.7 91 65.9
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 2.4e-24 115.9 91 62.6
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 3.2e-24 115.5 91 65.9
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 3.2e-24 115.5 89 61.8
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 5.5e-24 114.8 91 60.4
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.5e-24 114.8 91 60.4
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 7.1e-24 114.4 91 60.4
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 7.1e-24 114.4 89 61.8
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 1.6e-23 113.2 91 61.5
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 3.5e-23 112.1 89 62.9
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 7.9e-23 110.9 91 62.6
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 7.9e-23 110.9 89 60.7
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 7.9e-23 110.9 89 62.9
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.3e-22 110.2 90 63.3
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.3e-22 110.2 91 60.4
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.8e-22 109.8 92 60.9
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 3.0e-22 109.0 90 62.2
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 5.1e-22 108.2 89 59.6
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 6.7e-22 107.8 89 61.8
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 1.9e-21 106.3 94 60.6
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 3.3e-21 105.5 90 60.0
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 5.6e-21 104.8 91 57.1
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 7.4e-21 104.4 91 53.8
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.8e-20 102.4 91 57.1
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 6.2e-20 101.3 89 52.8
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.8e-19 99.8 91 56.0
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.4e-19 99.4 91 53.8
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 2.0e-18 96.3 122 50.0
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 3.4e-18 95.5 91 53.8
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.3e-17 93.6 88 55.7
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 2.2e-17 92.8 82 51.2
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 3.2e-16 89.0 92 48.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 4.2e-16 88.6 56 82.1
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 9.3e-16 87.4 56 80.4
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.8e-14 83.2 92 47.8
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.3e-14 82.8 80 55.0
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 3.0e-14 82.4 89 46.1
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.1e-14 81.6 83 57.8
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 5.7e-13 78.2 89 46.1
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 5.7e-13 78.2 89 40.4
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.0e-09 67.4 56 57.1
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 2.2e-09 66.2 107 37.4
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.1e-08 63.9 42 66.7
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 1.8e-06 56.6 36 66.7


User provided reference genes

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