Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 3.6e-160 568.2 277 100.0
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 2.8e-120 435.6 254 85.4
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 6.0e-83 311.6 260 62.7
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 1.3e-82 310.5 262 62.2
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 2.3e-82 309.7 261 60.2
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 3.0e-82 309.3 261 59.4
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 1.6e-80 303.5 265 59.6
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 6.9e-79 298.1 261 60.9
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 4.5e-78 295.4 266 58.3
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 4.9e-77 292.0 262 61.1
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 1.9e-76 290.0 265 59.2
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 9.3e-76 287.7 261 60.2
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 9.3e-76 287.7 268 57.1
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 9.3e-76 287.7 268 57.1
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 1.6e-75 287.0 257 57.2
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 4.6e-75 285.4 263 57.8
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 6.0e-75 285.0 265 57.0
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 6.0e-75 285.0 261 57.9
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 6.7e-74 281.6 245 58.0
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 2.5e-73 279.6 264 54.2
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 3.3e-73 279.3 265 55.8
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 4.3e-73 278.9 258 54.3
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 5.6e-73 278.5 261 57.1
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 7.4e-73 278.1 264 53.8
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 9.6e-73 277.7 240 57.9
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 1.3e-72 277.3 264 58.0
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 1.6e-72 276.9 264 56.1
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 1.1e-71 274.2 264 55.3
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 2.4e-71 273.1 263 54.0
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 2.4e-71 273.1 265 55.1
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 3.1e-71 272.7 262 55.7
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 3.1e-71 272.7 288 53.8
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 4.0e-71 272.3 262 55.0
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 9.0e-71 271.2 262 55.3
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 3.4e-70 269.2 253 55.7
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 5.8e-70 268.5 257 55.3
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 3.8e-69 265.8 264 54.9
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 8.4e-69 264.6 257 53.3
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 2.5e-68 263.1 267 52.1
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 3.2e-68 262.7 263 54.8
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 7.1e-68 261.5 264 53.8
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 1.2e-67 260.8 270 53.3
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 1.6e-67 260.4 264 53.8
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 1.6e-67 260.4 264 53.4
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 3.5e-67 259.2 258 51.9
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 6.0e-67 258.5 257 52.5
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 6.0e-67 258.5 259 53.7
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 1.0e-66 257.7 257 52.1
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 1.3e-66 257.3 253 50.6
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 1.3e-66 257.3 271 52.8
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 2.3e-66 256.5 266 51.5
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 8.7e-66 254.6 258 52.7
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 1.9e-65 253.4 258 52.7
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 2.5e-65 253.1 258 51.9
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 2.5e-65 253.1 258 51.9
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 2.5e-65 253.1 264 51.5
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 1.3e-64 250.8 249 51.8
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 1.6e-64 250.4 271 49.8
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 2.8e-64 249.6 263 52.1
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 1.4e-63 247.3 284 52.1
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 3.1e-63 246.1 267 50.9
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 5.3e-63 245.4 257 51.4
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 6.9e-63 245.0 258 51.6
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.4e-62 242.7 260 50.4
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 1.0e-61 241.1 268 50.7
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 1.4e-60 237.3 265 49.4
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 1.6e-59 233.8 259 47.5
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 1.8e-58 230.3 199 58.8
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 6.7e-58 228.4 271 48.7
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 1.1e-57 227.6 252 48.0
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 1.3e-56 224.2 255 45.1
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 2.2e-56 223.4 258 47.7
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 2.8e-56 223.0 265 46.4
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 2.0e-54 216.9 203 55.2
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 7.7e-54 214.9 264 47.0
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 1.7e-53 213.8 265 44.9
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 3.0e-50 203.0 275 40.0
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 1.3e-48 197.6 263 46.0
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 3.7e-48 196.1 317 39.7
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 6.9e-47 191.8 198 48.0
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 2.0e-46 190.3 199 48.7
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.0e-45 188.0 258 42.2
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 1.0e-45 188.0 194 49.0
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 1.1e-44 184.5 240 45.0
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 4.2e-44 182.6 198 47.5
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 9.4e-44 181.4 336 38.4
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 1.3e-40 171.0 200 48.0
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 2.6e-38 163.3 268 41.4
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 1.9e-36 157.1 135 59.3
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 1.9e-36 157.1 153 51.0
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 5.3e-31 139.0 198 43.9
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 1.6e-30 137.5 207 37.7
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 8.3e-24 115.2 120 46.7
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 8.3e-24 115.2 120 46.7
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 8.5e-21 105.1 96 52.1
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 9.5e-20 101.7 97 50.5
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 1.5e-17 94.4 118 35.6
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.1e-15 88.2 145 33.8
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 2.4e-15 87.0 84 51.2
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.8e-11 73.6 122 41.0
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 5.7e-09 65.9 52 53.8
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 6.4e-08 62.4 89 32.6


User provided reference genes

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