Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.9e-177 625.2 327 100.0
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 8.2e-164 580.5 319 95.3
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 1.4e-123 446.8 249 90.0
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 4.1e-123 445.3 248 88.7
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 1.2e-122 443.7 249 88.4
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.9e-121 439.1 249 87.1
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 3.9e-121 438.7 249 87.6
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 3.9e-121 438.7 249 88.4
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 6.6e-121 438.0 248 87.5
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 8.6e-121 437.6 248 86.3
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.1e-120 437.2 249 87.6
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 3.3e-120 435.6 248 87.9
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 4.3e-120 435.3 249 86.3
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 5.6e-120 434.9 249 87.6
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 7.3e-120 434.5 249 86.3
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 9.5e-120 434.1 249 86.7
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 1.6e-119 433.3 249 86.3
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 2.1e-119 433.0 249 86.7
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 3.6e-119 432.2 252 86.1
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 4.7e-119 431.8 249 85.5
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 4.7e-119 431.8 248 85.5
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 8.0e-119 431.0 249 84.7
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 1.8e-118 429.9 249 85.5
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.3e-118 429.5 249 85.5
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.3e-118 429.5 249 85.5
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 2.3e-118 429.5 249 85.5
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 5.2e-118 428.3 255 83.1
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 5.2e-118 428.3 249 84.7
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 6.8e-118 427.9 249 84.7
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.2e-117 427.2 249 84.3
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 5.8e-117 424.9 249 83.5
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 9.8e-117 424.1 258 82.2
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 4.9e-116 421.8 249 83.1
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 8.3e-116 421.0 255 80.4
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 8.3e-116 421.0 249 83.5
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.1e-115 420.6 249 83.5
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 1.4e-115 420.2 249 83.9
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 1.9e-115 419.9 253 82.2
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.4e-115 419.5 243 85.6
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 2.4e-115 419.5 255 82.4
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 5.4e-115 418.3 262 80.9
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 5.4e-115 418.3 249 81.9
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 5.4e-115 418.3 249 81.9
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 2.0e-114 416.4 249 81.5
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 2.7e-114 416.0 249 82.7
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 7.8e-114 414.5 249 82.7
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 2.3e-113 412.9 248 81.9
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 3.9e-113 412.1 243 83.5
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 4.3e-112 408.7 249 81.9
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 5.6e-112 408.3 247 80.2
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.2e-111 407.1 257 79.4
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 3.6e-111 405.6 249 79.9
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 4.7e-111 405.2 248 80.6
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.1e-110 402.5 262 77.5
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 6.8e-110 401.4 249 79.5
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 2.0e-109 399.8 247 78.9
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 4.4e-109 398.7 249 77.9
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 5.8e-109 398.3 249 79.5
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 2.9e-108 396.0 249 78.7
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 6.4e-108 394.8 249 78.7
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 8.3e-108 394.4 249 78.7
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 1.4e-107 393.7 249 78.3
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 5.4e-107 391.7 249 79.1
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 3.5e-106 389.0 260 76.5
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 3.5e-106 389.0 270 75.9
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 3.5e-106 389.0 249 78.3
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 2.3e-105 386.3 254 76.8
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 5.1e-105 385.2 268 73.5
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 6.6e-105 384.8 259 75.3
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 6.6e-105 384.8 249 77.1
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.5e-104 383.6 248 77.8
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.3e-104 382.5 265 73.6
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 7.3e-104 381.3 271 72.0
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 7.3e-104 381.3 248 75.8
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.6e-103 380.2 248 77.0
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.1e-103 379.8 248 77.0
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 8.1e-103 377.9 251 76.1
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 2.6e-101 372.9 249 76.7
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 2.9e-100 369.4 248 77.0
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.2e-98 364.0 249 74.7
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.2e-98 364.0 349 58.7
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 2.1e-98 363.2 249 75.5
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 6.0e-98 361.7 254 73.6
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 3.0e-97 359.4 254 72.0
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 8.6e-97 357.8 249 74.3
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.1e-96 357.5 254 72.0
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 1.2e-95 354.0 342 57.6
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 2.2e-92 343.2 249 71.1
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 4.9e-92 342.0 193 87.0
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 2.4e-91 339.7 249 67.9
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 3.2e-91 339.3 249 70.3
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.8e-85 318.5 254 61.4
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.8e-85 318.5 254 61.4
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 7.6e-85 318.2 340 55.3
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 9.9e-85 317.8 247 68.4
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 7.1e-83 311.6 304 56.2
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 3.5e-82 309.3 219 73.1
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 5.1e-73 278.9 235 65.1
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 5.1e-73 278.9 198 72.2
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.5e-72 277.3 175 81.7
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 6.2e-71 271.9 173 75.7
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 1.1e-70 271.2 197 67.5
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 4.0e-70 269.2 255 53.7
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 9.0e-70 268.1 264 53.0
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 2.1e-66 256.9 179 73.7
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 3.5e-58 229.6 302 49.0
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.7e-52 210.7 115 89.6
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 1.7e-47 194.1 118 78.8
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 1.0e-44 184.9 258 41.9
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 1.6e-42 177.6 110 83.6
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 4.4e-40 169.5 254 39.4
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 5.9e-37 159.1 269 41.6
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 1.3e-36 157.9 250 40.4
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 2.2e-36 157.1 89 87.6
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 3.6e-34 149.8 238 42.9
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 6.7e-33 145.6 78 89.7
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-28 130.6 266 38.7
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 5.0e-28 129.4 238 42.0
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 6.5e-28 129.0 232 41.4
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 8.5e-28 128.6 86 66.3
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.6e-26 123.2 254 39.0
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 3.6e-26 123.2 238 40.8
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-24 117.9 220 41.4
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 9.8e-24 115.2 263 38.0
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 1.7e-23 114.4 194 42.8
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 4.8e-23 112.8 234 37.2
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 1.6e-21 107.8 195 42.6
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 5.9e-21 105.9 208 39.4
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 5.9e-21 105.9 208 39.4
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-20 105.1 142 44.4
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-20 103.2 208 40.4
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 5.0e-20 102.8 114 57.9
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.1e-19 101.7 55 89.1
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 3.2e-19 100.1 142 43.0
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 6.8e-17 92.4 59 67.8
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 1.4e-14 84.7 177 40.1
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 1.8e-14 84.3 148 44.6
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 6.6e-12 75.9 141 43.3
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 8.6e-12 75.5 161 37.3
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.1e-10 70.9 318 25.5
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 1.0e-09 68.6 178 32.0
arahy.Tifrunner.gnm1.ann1.0EHY87 Arachis hypogaea HOM05D004017 ORTHO05D004612 7.0e-06 55.8 57 52.6
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 9.2e-06 55.5 109 45.0


User provided reference genes

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