Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035266001 Vitis vinifera HOM05D000498 ORTHO05D000354 1.3e-28 129.0 64 100.0
GSVIVG01035256001 Vitis vinifera HOM05D000498 ORTHO05D000354 3.6e-15 84.3 47 85.1
Ca_17073_v3 Cicer arietinum L. HOM05D000498 ORTHO05D000354 6.2e-15 83.6 48 79.2
TPR.G26664 Trifolium pratense HOM05D000498 ORTHO05D000354 8.0e-15 83.2 48 79.2
Psat5g142280 Pisum sativum HOM05D000498 ORTHO05D000354 1.4e-14 82.4 48 79.2
Cpa.g.sc1612.1 Carica papaya HOM05D000498 ORTHO05D000354 2.3e-14 81.6 47 76.6
Manes.02G081800 Manihot esculenta HOM05D000498 ORTHO05D000354 3.1e-14 81.3 47 80.9
Medtr3g064700 Medicago truncatula HOM05D000498 ORTHO05D000354 8.9e-14 79.7 48 75.0
Dinv19084 Davidia involucrata HOM05D000498 ORTHO05D000354 1.2e-13 79.3 48 75.0
arahy.Tifrunner.gnm1.ann1.YH7NAD Arachis hypogaea HOM05D000498 ORTHO05D000354 2.0e-13 78.6 47 76.6
CSS0022086 Camellia sinensis var. sinensis HOM05D000498 ORTHO05D000354 2.0e-13 78.6 47 76.6
CSS0031248 Camellia sinensis var. sinensis HOM05D000498 ORTHO05D000354 2.0e-13 78.6 47 76.6
GSVIVG01035262001 Vitis vinifera HOM05D000498 ORTHO05D000354 2.0e-13 78.6 47 76.6
Ciclev10012739m.g Citrus clementina HOM05D000498 ORTHO05D000354 2.6e-13 78.2 47 76.6
Atru.chr1.2112 Acer truncatum HOM05D000498 ORTHO05D000354 3.4e-13 77.8 47 76.6
PGR004G2747 Punica granatum HOM05D000498 ORTHO05D000354 3.4e-13 77.8 48 79.2
RcHm_v2.0_Chr3g0488551 Rosa chinensis HOM05D000498 ORTHO05D000354 3.4e-13 77.8 46 76.1
CSS0005789 Camellia sinensis var. sinensis HOM05D000498 ORTHO05D000354 4.4e-13 77.4 47 74.5
Thecc.04G058800 Theobroma cacao HOM05D000498 ORTHO05D000354 4.4e-13 77.4 47 76.6
Duzib138G0415 Durio zibethinus HOM05D000498 ORTHO05D000354 5.8e-13 77.0 47 74.5
Actinidia35705 Actinidia chinensis HOM05D000498 ORTHO05D000354 1.3e-12 75.9 47 72.3
Lalb_Chr15g0085181 Lupinus albus HOM05D000498 ORTHO05D000354 1.3e-12 75.9 48 77.1
arahy.Tifrunner.gnm1.ann1.SN486S Arachis hypogaea HOM05D000498 ORTHO05D000354 1.7e-12 75.5 47 74.5
Cfa007752 Carpinus fangiana HOM05D000498 ORTHO05D000354 1.7e-12 75.5 46 73.9
Gohir.D07G079000 Gossypium hirsutum HOM05D000498 ORTHO05D000354 2.9e-12 74.7 47 70.2
Phvul.006G087500 Phaseolus vulgaris HOM05D000498 ORTHO05D000354 3.7e-12 74.3 48 70.8
Potri.017G138800 Populus trichocarpa HOM05D000498 ORTHO05D000354 3.7e-12 74.3 47 72.3
Haze_14320 Corylus avellana HOM05D000498 ORTHO05D000354 4.9e-12 73.9 48 70.8
Lj6g0011173 Lotus japonicus HOM05D000498 ORTHO05D000354 4.9e-12 73.9 48 72.9
Glyma.11G212900 Glycine max HOM05D000498 ORTHO05D000354 6.4e-12 73.6 47 72.3
Glyma.18G043700 Glycine max HOM05D000498 ORTHO05D000354 8.3e-12 73.2 47 72.3
MBI06_g13412_MAGBIO Magnolia biondii HOM05D000498 ORTHO05D000354 1.4e-11 72.4 46 71.7
Hma1.2p1_0158F.1_g069560 Hydrangea macrophylla HOM05D000498 ORTHO05D000354 1.9e-11 72.0 47 66.0
Aqoxy3G04168 Aquilegia oxysepala HOM05D000498 ORTHO05D000354 2.4e-11 71.6 47 70.2
CAN.G1681.18 Capsicum annuum HOM05D000498 ORTHO05D000354 3.2e-11 71.2 48 68.8
Gohir.A07G074300 Gossypium hirsutum HOM05D000498 ORTHO05D000354 3.2e-11 71.2 47 68.1
Gorai.001G083600 Gossypium raimondii HOM05D000498 ORTHO05D000354 3.2e-11 71.2 47 68.1
Nitab4.5_0003412g0070 Nicotiana tabacum HOM05D000498 ORTHO05D000354 3.2e-11 71.2 48 68.8
Sabra17G0113300 Salix brachista HOM05D000498 ORTHO05D000354 3.2e-11 71.2 47 68.1
Sabra17G0116700 Salix brachista HOM05D000498 ORTHO05D000354 3.2e-11 71.2 47 68.1
Carub.0003s0234 Capsella rubella HOM05D000498 ORTHO05D000354 4.1e-11 70.9 47 68.1
CDE05G0027 Ceratophyllum demersum HOM05D000498 ORTHO05D000354 4.1e-11 70.9 47 68.1
Eucgr.F02915 Eucalyptus grandis HOM05D000498 ORTHO05D000354 4.1e-11 70.9 46 65.2
Solyc02g081340.3 Solanum lycopersicum HOM05D000498 ORTHO05D000354 4.1e-11 70.9 48 68.8
Sopen02g025970 Solanum pennellii HOM05D000498 ORTHO05D000354 4.1e-11 70.9 48 68.8
AL3G12800 Arabidopsis lyrata HOM05D000498 ORTHO05D000354 5.4e-11 70.5 47 66.0
Nn4g24774 Nelumbo nucifera HOM05D000498 ORTHO05D000354 5.4e-11 70.5 46 69.6
Nitab4.5_0000483g0230 Nicotiana tabacum HOM05D000498 ORTHO05D000354 5.4e-11 70.5 48 68.8
CiPaw.04G049300 Carya illinoinensis HOM05D000498 ORTHO05D000354 7.0e-11 70.1 47 66.0
Cc00_g26170 Coffea canephora HOM05D000498 ORTHO05D000354 7.0e-11 70.1 48 66.7
Lj2A511T40 Lonicera japonica HOM05D000498 ORTHO05D000354 7.0e-11 70.1 47 68.1
Peaxi162Scf00713g00038 Petunia axillaris HOM05D000498 ORTHO05D000354 7.0e-11 70.1 48 66.7
PGSC0003DMG400016722 Solanum tuberosum HOM05D000498 ORTHO05D000354 7.0e-11 70.1 48 66.7
Thhalv10014654m.g Eutrema salsugineum HOM05D000498 ORTHO05D000354 9.2e-11 69.7 47 63.8
FvH4_1g27460 Fragaria vesca HOM05D000498 ORTHO05D000354 9.2e-11 69.7 46 67.4
FAN19G2184 Fragaria x ananassa HOM05D000498 ORTHO05D000354 9.2e-11 69.7 46 67.4
vmacro18506 Vaccinium macrocarpon HOM05D000498 ORTHO05D000354 9.2e-11 69.7 47 63.8
VMungo0540G2196 Vigna mungo HOM05D000498 ORTHO05D000354 9.2e-11 69.7 48 68.8
AT5G17220 Arabidopsis thaliana HOM05D000498 ORTHO05D000354 1.2e-10 69.3 47 63.8
MD17G1272100 Malus domestica HOM05D000498 ORTHO05D000354 1.2e-10 69.3 46 67.4
BcaB08g36797 Brassica carinata HOM05D000498 ORTHO05D000354 1.6e-10 68.9 47 68.1
BcaC04g18819 Brassica carinata HOM05D000498 ORTHO05D000354 1.6e-10 68.9 47 68.1
C09p59960 Brassica napus HOM05D000498 ORTHO05D000354 1.6e-10 68.9 47 68.1
BolC9t58832H Brassica oleracea HOM05D000498 ORTHO05D000354 1.6e-10 68.9 47 68.1
A10p22170 Brassica napus HOM05D000498 ORTHO05D000354 2.0e-10 68.6 47 66.0
BraA10t44276Z Brassica rapa HOM05D000498 ORTHO05D000354 2.0e-10 68.6 47 66.0
THA.LOC104820867 Tarenaya hassleriana HOM05D000498 ORTHO05D000354 2.0e-10 68.6 47 66.0
CANSAT64G2745 Cannabis sativa HOM05D000498 ORTHO05D000354 2.7e-10 68.2 48 64.6
DCAR_003401 Daucus carota HOM05D000498 ORTHO05D000354 2.7e-10 68.2 47 66.0
Thhalv10021507m.g Eutrema salsugineum HOM05D000498 ORTHO05D000354 2.7e-10 68.2 47 61.7
FAN26G0532 Fragaria x ananassa HOM05D000498 ORTHO05D000354 2.7e-10 68.2 46 65.2
Oeu012517.1 Olea europaea HOM05D000498 ORTHO05D000354 2.7e-10 68.2 48 70.8
THA.LOC104820869 Tarenaya hassleriana HOM05D000498 ORTHO05D000354 2.7e-10 68.2 47 61.7
AT3G03190 Arabidopsis thaliana HOM05D000498 ORTHO05D000354 3.5e-10 67.8 47 63.8
Prupe.3G013600 Prunus persica HOM05D000498 ORTHO05D000354 3.5e-10 67.8 46 65.2
QL02p064164 Quercus lobata HOM05D000498 ORTHO05D000354 4.6e-10 67.4 47 63.8
Sp3g02230 Schrenkiella parvula HOM05D000498 ORTHO05D000354 4.6e-10 67.4 47 59.6
MSTRG.3669 Avicennia marina HOM05D000498 ORTHO05D000354 6.0e-10 67.0 47 66.0
BcaC05g30527 Brassica carinata HOM05D000498 ORTHO05D000354 7.8e-10 66.6 47 57.4
A05p44000 Brassica napus HOM05D000498 ORTHO05D000354 7.8e-10 66.6 47 57.4
C05p63620 Brassica napus HOM05D000498 ORTHO05D000354 7.8e-10 66.6 47 57.4
BolC5t35031H Brassica oleracea HOM05D000498 ORTHO05D000354 7.8e-10 66.6 47 57.4
BraSC90t46710Z Brassica rapa HOM05D000498 ORTHO05D000354 7.8e-10 66.6 47 57.4
BcaNung00412 Brassica carinata HOM05D000498 ORTHO05D000354 1.0e-09 66.2 47 63.8
Rhsim08G0022000 Rhododendron simsii HOM05D000498 ORTHO05D000354 1.0e-09 66.2 47 63.8
TWI74G0033 Tripterygium wilfordii HOM05D000498 ORTHO05D000354 1.0e-09 66.2 45 66.7
AL6G28270 Arabidopsis lyrata HOM05D000498 ORTHO05D000354 1.3e-09 65.9 47 61.7
Carub.0006s1541 Capsella rubella HOM05D000498 ORTHO05D000354 1.3e-09 65.9 47 61.7
HanXRQChr01g0015391 Helianthus annuus HOM05D000498 ORTHO05D000354 1.3e-09 65.9 46 65.2
BcaC03g18540 Brassica carinata HOM05D000498 ORTHO05D000354 2.3e-09 65.1 47 61.7
Sp6g27010 Schrenkiella parvula HOM05D000498 ORTHO05D000354 3.0e-09 64.7 47 61.7
SGA_v2.0_scaffold115G32041 Striga asiatica HOM05D000498 ORTHO05D000354 3.9e-09 64.3 47 66.0
TAR626G0992 Trochodendron aralioides HOM05D000498 ORTHO05D000354 6.6e-09 63.5 48 64.6
CARHR195990 Cardamine hirsuta HOM05D000498 ORTHO05D000354 1.1e-08 62.8 47 57.4
Eucgr.K01229 Eucalyptus grandis HOM05D000498 ORTHO05D000354 2.5e-08 61.6 48 68.8
PSO170G3357 Papaver somniferum HOM05D000498 ORTHO05D000354 2.5e-08 61.6 48 62.5
SEGI_27645 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 2.5e-08 61.6 48 60.4
ATR0763G109 Amborella trichopoda HOM05D000498 ORTHO05D000354 4.3e-08 60.8 48 60.4
Prupe.3G178100 Prunus persica HOM05D000498 ORTHO05D000354 5.6e-08 60.5 48 62.5
PSO063G2862 Papaver somniferum HOM05D000498 ORTHO05D000354 7.3e-08 60.1 48 58.3
Manes.01G130900 Manihot esculenta HOM05D000498 ORTHO05D000354 9.5e-08 59.7 48 62.5
SEGI_01792 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 9.5e-08 59.7 48 56.2
SEGI_38651 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.2e-07 59.3 48 56.2
Aa31LG5G13660 Aethionema arabicum HOM05D000498 ORTHO05D000354 1.6e-07 58.9 47 51.1
COL.COLO4_38389 Corchorus olitorius HOM05D000498 ORTHO05D000354 1.6e-07 58.9 54 59.3
Migut.K00978 Erythranthe guttata HOM05D000498 ORTHO05D000354 1.6e-07 58.9 47 57.4
Glyma.18G111301 Glycine max HOM05D000498 ORTHO05D000354 1.6e-07 58.9 48 62.5
PSO170G0251 Papaver somniferum HOM05D000498 ORTHO05D000354 1.6e-07 58.9 47 57.4
Lsat_1_v5_gn_8_54660 Lactuca sativa HOM05D000498 ORTHO05D000354 2.1e-07 58.5 46 54.3
VMungo0540G0034 Vigna mungo HOM05D000498 ORTHO05D000354 2.1e-07 58.5 54 59.3
Glyma.08G306800 Glycine max HOM05D000498 ORTHO05D000354 2.8e-07 58.2 54 59.3
Glyma.18G111200 Glycine max HOM05D000498 ORTHO05D000354 2.8e-07 58.2 54 59.3
PSO782G4729 Papaver somniferum HOM05D000498 ORTHO05D000354 3.6e-07 57.8 46 56.5
SEGI_23013 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 3.6e-07 57.8 46 56.5
SEGI_33087 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 3.6e-07 57.8 46 56.5
SEGI_03588 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 4.7e-07 57.4 48 54.2
Eucgr.K01231 Eucalyptus grandis HOM05D000498 ORTHO05D000354 8.1e-07 56.6 54 61.1
arahy.Tifrunner.gnm1.ann1.67E0CQ Arachis hypogaea HOM05D000498 ORTHO05D000354 1.1e-06 56.2 48 62.5
arahy.Tifrunner.gnm1.ann1.F8LB2J Arachis hypogaea HOM05D000498 ORTHO05D000354 1.1e-06 56.2 48 62.5
arahy.Tifrunner.gnm1.ann1.NH9VWV Arachis hypogaea HOM05D000498 ORTHO05D000354 1.1e-06 56.2 62 48.4
Manes.02G089200 Manihot esculenta HOM05D000498 ORTHO05D000354 1.1e-06 56.2 48 56.2
Nn7g38007 Nelumbo nucifera HOM05D000498 ORTHO05D000354 1.1e-06 56.2 48 56.2
Duzib211G0701 Durio zibethinus HOM05D000498 ORTHO05D000354 1.4e-06 55.8 48 62.5
Lsat_1_v5_gn_7_30140 Lactuca sativa HOM05D000498 ORTHO05D000354 1.4e-06 55.8 54 55.6
Manes.02G089100 Manihot esculenta HOM05D000498 ORTHO05D000354 1.4e-06 55.8 48 58.3
Phvul.006G020800 Phaseolus vulgaris HOM05D000498 ORTHO05D000354 1.4e-06 55.8 48 60.4
Phvul.006G022600 Phaseolus vulgaris HOM05D000498 ORTHO05D000354 1.4e-06 55.8 48 60.4
unitig_32.g10730 Utricularia gibba HOM05D000498 ORTHO05D000354 1.4e-06 55.8 46 56.5
Lj6g0015309 Lotus japonicus HOM05D000498 ORTHO05D000354 1.8e-06 55.5 48 58.3
HanXRQChr04g0118201 Helianthus annuus HOM05D000498 ORTHO05D000354 2.3e-06 55.1 46 54.3
MD17G1133800 Malus domestica HOM05D000498 ORTHO05D000354 2.3e-06 55.1 48 60.4
SEGI_02250 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 2.3e-06 55.1 48 50.0
Aqoxy1G01564 Aquilegia oxysepala HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 54.2
arahy.Tifrunner.gnm1.ann1.M3NNG8 Arachis hypogaea HOM05D000498 ORTHO05D000354 3.1e-06 54.7 63 47.6
A02p04020 Brassica napus HOM05D000498 ORTHO05D003207 3.1e-06 54.7 39 61.5
BraA02t05365Z Brassica rapa HOM05D000498 ORTHO05D003207 3.1e-06 54.7 39 61.5
CSS0007762 Camellia sinensis var. sinensis HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 56.2
CSS0027599 Camellia sinensis var. sinensis HOM05D000498 ORTHO05D000354 3.1e-06 54.7 46 56.5
Gohir.A11G157300 Gossypium hirsutum HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 60.4
Gohir.D11G164300 Gossypium hirsutum HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 60.4
Gorai.007G175100 Gossypium raimondii HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 60.4
MBI01_g36035_MAGBIO Magnolia biondii HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 56.2
MD09G1147300 Malus domestica HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 56.2
Manes.02G143300 Manihot esculenta HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 56.2
Prupe.3G178200 Prunus persica HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 56.2
SEGI_04326 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 54.2
SEGI_14016 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 54.2
TWI59G0094 Tripterygium wilfordii HOM05D000498 ORTHO05D000354 3.1e-06 54.7 48 58.3
CSS0003128 Camellia sinensis var. sinensis HOM05D000498 ORTHO05D000354 4.0e-06 54.3 46 56.5
MD17G1134300 Malus domestica HOM05D000498 ORTHO05D000354 4.0e-06 54.3 48 60.4
arahy.Tifrunner.gnm1.ann1.6TET7K Arachis hypogaea HOM05D000498 ORTHO05D000354 5.2e-06 53.9 48 58.3
Cpa.g.sc50.116 Carica papaya HOM05D000498 ORTHO05D000354 5.2e-06 53.9 48 58.3
Ciclev10032737m.g Citrus clementina HOM05D000498 ORTHO05D000354 5.2e-06 53.9 54 55.6
Eucgr.K01232 Eucalyptus grandis HOM05D000498 ORTHO05D000354 5.2e-06 53.9 54 57.4
MD09G1147100 Malus domestica HOM05D000498 ORTHO05D000354 5.2e-06 53.9 48 58.3
arahy.Tifrunner.gnm1.ann1.CRBY30 Arachis hypogaea HOM05D000498 ORTHO05D000354 6.8e-06 53.5 48 58.3
CSS0044356 Camellia sinensis var. sinensis HOM05D000498 ORTHO05D000354 6.8e-06 53.5 63 49.2
Lsat_1_v5_gn_3_87760 Lactuca sativa HOM05D000498 ORTHO05D000354 6.8e-06 53.5 47 55.3
MBI19_g18873_MAGBIO Magnolia biondii HOM05D000498 ORTHO05D000354 6.8e-06 53.5 47 53.2
Phvul.008G195500 Phaseolus vulgaris HOM05D000498 ORTHO05D000354 6.8e-06 53.5 48 60.4
Phvul.008G195600 Phaseolus vulgaris HOM05D000498 ORTHO05D000354 6.8e-06 53.5 48 60.4
Thecc.01G167900 Theobroma cacao HOM05D000498 ORTHO05D000354 6.8e-06 53.5 48 60.4
Duzib138G1889 Durio zibethinus HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 58.3
Eucgr.K01233 Eucalyptus grandis HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 60.4
Eucgr.K01236 Eucalyptus grandis HOM05D000498 ORTHO05D000354 8.9e-06 53.1 54 57.4
FvH4_6g38760 Fragaria vesca HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 56.2
FAN02G3190 Fragaria x ananassa HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 56.2
FAN05G1527 Fragaria x ananassa HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 56.2
FAN09G1486 Fragaria x ananassa HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 56.2
FAN09G2564 Fragaria x ananassa HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 56.2
FAN14G1005 Fragaria x ananassa HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 56.2
Lj8A97T47 Lonicera japonica HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 56.2
MD17G1133600 Malus domestica HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 58.3
Medtr3g450790 Medicago truncatula HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 58.3
Thecc.01G168000 Theobroma cacao HOM05D000498 ORTHO05D000354 8.9e-06 53.1 48 60.4


User provided reference genes

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