Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 6.8e-94 347.4 190 100.0
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 5.1e-49 198.4 195 66.7
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 8.7e-49 197.6 189 66.7
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 6.9e-46 188.0 195 65.1
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 2.9e-44 182.6 199 59.3
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 8.4e-44 181.0 209 55.5
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.4e-43 179.5 197 60.9
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 4.2e-43 178.7 203 59.1
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 7.1e-43 177.9 197 61.9
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 9.3e-43 177.6 200 58.5
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 1.8e-41 173.3 190 58.9
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 6.7e-41 171.4 195 60.5
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 6.7e-41 171.4 207 56.5
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 5.6e-40 168.3 207 52.2
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 7.4e-40 167.9 198 58.1
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 9.6e-40 167.5 207 52.7
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 9.6e-40 167.5 207 52.2
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 2.1e-39 166.4 200 53.5
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 2.1e-39 166.4 203 56.2
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 4.8e-39 165.2 203 55.2
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 6.2e-39 164.9 194 58.8
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 2.4e-38 162.9 205 49.3
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 1.5e-37 160.2 210 50.0
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 2.0e-37 159.8 191 54.5
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.0e-37 159.8 191 54.5
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 2.6e-37 159.5 190 57.9
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.4e-37 159.1 204 52.5
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 4.5e-37 158.7 191 53.9
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 2.9e-36 156.0 208 54.3
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 8.4e-36 154.5 186 55.9
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 8.4e-36 154.5 188 55.9
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 1.4e-35 153.7 205 49.8
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 1.6e-34 150.2 205 49.3
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 3.5e-34 149.1 200 54.0
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 4.6e-34 148.7 210 52.9
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 6.0e-34 148.3 196 53.6
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 7.9e-34 147.9 189 58.7
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 6.7e-33 144.8 189 57.7
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 1.9e-32 143.3 211 53.6
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 1.9e-32 143.3 168 55.4
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 3.3e-32 142.5 155 61.3
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 4.3e-32 142.1 220 45.5
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 5.7e-32 141.7 201 48.3
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 5.7e-32 141.7 206 48.1
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 1.3e-31 140.6 196 53.1
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 2.1e-31 139.8 206 51.0
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 2.1e-31 139.8 206 51.0
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 2.8e-31 139.4 206 50.0
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.1e-30 137.5 194 55.2
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.4e-30 137.1 169 50.9
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 2.4e-30 136.3 197 51.8
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 9.0e-30 134.4 196 53.1
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.5e-29 133.7 197 42.1
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 2.6e-29 132.9 208 51.0
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 3.4e-29 132.5 198 44.4
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 4.5e-29 132.1 201 48.8
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.0e-28 131.0 148 60.8
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 1.3e-28 130.6 206 49.0
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 1.3e-28 130.6 204 45.1
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 1.9e-27 126.7 211 50.2
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 2.5e-27 126.3 204 50.0
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 9.3e-27 124.4 197 53.8
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.2e-26 124.0 210 47.1
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 2.7e-26 122.9 212 49.5
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 3.5e-26 122.5 205 49.8
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 3.5e-26 122.5 205 49.8
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 1.3e-25 120.6 154 50.0
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 1.8e-25 120.2 150 59.3
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 2.3e-25 119.8 201 41.8
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 3.9e-25 119.0 196 45.4
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 5.1e-25 118.6 148 57.4
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 6.7e-25 118.2 206 41.3
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 4.3e-24 115.5 194 46.9
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 5.7e-24 115.2 146 57.5
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 2.2e-23 113.2 196 44.9
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 3.7e-23 112.5 194 47.9
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 4.8e-23 112.1 210 44.3
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 4.8e-23 112.1 206 41.7
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 6.3e-23 111.7 203 46.8
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 6.3e-23 111.7 195 48.7
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.5e-21 107.1 188 46.3
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 1.5e-21 107.1 73 71.2
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 2.0e-21 106.7 202 44.1
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 2.0e-21 106.7 157 55.4
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 3.8e-20 102.4 199 47.2
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 6.5e-20 101.7 208 46.6
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.9e-19 100.1 146 54.8
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 4.2e-19 99.0 205 43.9
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 4.2e-19 99.0 206 46.1
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 7.2e-19 98.2 182 39.0
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 7.9e-18 94.7 152 46.7
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.0e-17 94.4 186 41.9
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 4.3e-16 89.0 118 58.5
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 2.8e-15 86.3 154 47.4
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 4.8e-15 85.5 200 40.0
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 6.3e-15 85.1 76 57.9
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.4e-14 84.0 129 45.0
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.8e-14 83.6 124 54.0
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 5.3e-14 82.0 58 70.7
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 9.1e-14 81.3 153 45.8
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 1.2e-13 80.9 152 39.5
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 1.3e-12 77.4 190 42.6
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 8.5e-12 74.7 49 67.3
Sed0010921 Sechium edule HOM05D007152 ORTHO05D008912 8.5e-12 74.7 192 36.5
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 4.2e-11 72.4 141 48.2
AagrBONN_evm.TU.Sc2ySwM_117.77 Anthoceros agrestis HOM05D037445 ORTHO05D031142 1.4e-09 67.4 148 41.9
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 1.1e-08 64.3 30 86.7
CDE09G0901 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 2.8e-07 59.7 152 40.8
ATR0693G346 Amborella trichopoda HOM05D007152 ORTHO05D008912 4.8e-07 58.9 133 43.6


User provided reference genes

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