Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035087001 Vitis vinifera HOM05D002282 ORTHO05D002403 5.0e-24 113.6 58 100.0
GSVIVG01035079001 Vitis vinifera HOM05D002282 ORTHO05D002403 2.1e-09 65.1 31 96.8
Cfa006257 Carpinus fangiana HOM05D002282 ORTHO05D004557 1.0e-08 62.8 46 67.4
Haze_01140 Corylus avellana HOM05D002282 ORTHO05D002403 1.0e-08 62.8 33 87.9
Hund11944 Selenicereus undatus HOM05D002282 ORTHO05D002403 1.0e-08 62.8 33 81.8
Rhsim02G0006600 Rhododendron simsii HOM05D002282 ORTHO05D002403 3.9e-08 60.8 41 70.7
Actinidia14273 Actinidia chinensis HOM05D000338 ORTHO05D002403 5.1e-08 60.5 31 90.3
Cfa015451 Carpinus fangiana HOM05D002282 ORTHO05D002403 5.1e-08 60.5 31 90.3
CiPaw.01G144200 Carya illinoinensis HOM05D002282 ORTHO05D002403 5.1e-08 60.5 31 90.3
Haze_04567 Corylus avellana HOM05D002282 ORTHO05D002403 5.1e-08 60.5 31 90.3
QL06p010943 Quercus lobata HOM05D002282 ORTHO05D002403 5.1e-08 60.5 31 90.3
vmacro02293 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 6.6e-08 60.1 35 80.0
Lj3A826G75 Lonicera japonica HOM05D002282 ORTHO05D002403 1.1e-07 59.3 31 87.1
TWI09G1448 Tripterygium wilfordii HOM05D002282 ORTHO05D002403 1.1e-07 59.3 31 87.1
Actinidia13378 Actinidia chinensis HOM05D002282 ORTHO05D002403 2.5e-07 58.2 31 87.1
COL.COLO4_03675 Corchorus olitorius HOM05D002282 ORTHO05D002403 2.5e-07 58.2 31 83.9
Dinv29708 Davidia involucrata HOM05D002282 ORTHO05D002403 2.5e-07 58.2 31 83.9
Duzib052G0572 Durio zibethinus HOM05D002282 ORTHO05D002403 2.5e-07 58.2 31 83.9
Solyc02g030080.4 Solanum lycopersicum HOM05D002282 ORTHO05D002403 2.5e-07 58.2 33 78.8
Thecc.04G291300 Theobroma cacao HOM05D002282 ORTHO05D002403 2.5e-07 58.2 31 83.9
EL10Ac3g04935 Beta vulgaris HOM05D002282 ORTHO05D002403 3.3e-07 57.8 31 83.9
Sopen02g009400 Solanum pennellii HOM05D002282 ORTHO05D002403 3.3e-07 57.8 31 83.9
PGSC0003DMG400011805 Solanum tuberosum HOM05D002282 ORTHO05D002403 3.3e-07 57.8 31 83.9
Nn8g40612 Nelumbo nucifera HOM05D002282 ORTHO05D002403 4.3e-07 57.4 31 83.9
RcHm_v2.0_Chr4g0423831 Rosa chinensis HOM05D002282 ORTHO05D002403 5.6e-07 57.0 31 83.9
AUR62016160 Chenopodium quinoa HOM05D002282 ORTHO05D002403 9.5e-07 56.2 31 77.4
AUR62035074 Chenopodium quinoa HOM05D002282 ORTHO05D002403 9.5e-07 56.2 31 77.4
AUR62044456 Chenopodium quinoa HOM05D002282 ORTHO05D002403 9.5e-07 56.2 31 77.4
Peaxi162Scf00065g01016 Petunia axillaris HOM05D002282 ORTHO05D002403 1.2e-06 55.8 31 77.4
TAR365G0623 Trochodendron aralioides HOM05D002282 ORTHO05D002403 1.2e-06 55.8 31 80.6
CSS0020497 Camellia sinensis var. sinensis HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 80.6
Gohir.A09G063800 Gossypium hirsutum HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 80.6
Gohir.D09G062700 Gossypium hirsutum HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 80.6
Gorai.006G077500 Gossypium raimondii HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 80.6
MD16G1161700 Malus domestica HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 83.9
Manes.15G008900 Manihot esculenta HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 83.9
Nitab4.5_0000378g0050 Nicotiana tabacum HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 80.6
Nitab4.5_0001298g0020 Nicotiana tabacum HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 80.6
Prupe.1G129200 Prunus persica HOM05D002282 ORTHO05D002403 1.6e-06 55.5 31 83.9
ClCG06G004860 Citrullus lanatus HOM05D002282 ORTHO05D002403 2.1e-06 55.1 31 83.9
MELO3C021295.2 Cucumis melo HOM05D002282 ORTHO05D002403 2.1e-06 55.1 31 83.9
CsaV3_6G022650 Cucumis sativus L. HOM05D002282 ORTHO05D002403 2.1e-06 55.1 31 83.9
MSTRG.10121 Avicennia marina HOM05D002282 ORTHO05D002403 3.6e-06 54.3 33 72.7
CANSAT35G1122 Cannabis sativa HOM05D002282 ORTHO05D002403 3.6e-06 54.3 31 80.6
Cc03_g01330 Coffea canephora HOM05D002282 ORTHO05D002403 3.6e-06 54.3 31 77.4
Eucgr.A01301 Eucalyptus grandis HOM05D002282 ORTHO05D002403 3.6e-06 54.3 31 80.6
Sc19g0003390 Simmondsia chinensis HOM05D002282 ORTHO05D002403 3.6e-06 54.3 31 77.4
vmacro13795 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 3.6e-06 54.3 31 83.9
MBI19_g05149_MAGBIO Magnolia biondii HOM05D002282 ORTHO05D002403 4.7e-06 53.9 31 77.4
PGR031G2323 Punica granatum HOM05D002282 ORTHO05D002403 4.7e-06 53.9 31 77.4
Sabra10G0004600 Salix brachista HOM05D002282 ORTHO05D002403 6.2e-06 53.5 35 71.4
Atru.chr4.2932 Acer truncatum HOM05D002282 ORTHO05D002403 8.1e-06 53.1 34 67.6
Ciclev10004544m.g Citrus clementina HOM05D002282 ORTHO05D002403 8.1e-06 53.1 31 74.2
HanXRQChr03g0084951 Helianthus annuus HOM05D002282 ORTHO05D002403 8.1e-06 53.1 31 77.4
MD13G1161900 Malus domestica HOM05D002282 ORTHO05D002403 8.1e-06 53.1 31 80.6


User provided reference genes

Program Settings