Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 9.0e-150 533.5 257 100.0
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 1.2e-88 330.5 205 77.1
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 7.5e-88 327.8 205 73.7
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 9.8e-88 327.4 205 75.1
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 1.7e-87 326.6 205 74.6
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 8.3e-87 324.3 205 73.7
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 7.0e-86 321.2 205 73.2
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 3.9e-84 315.5 205 73.2
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 6.6e-84 314.7 205 72.7
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 8.6e-84 314.3 205 71.2
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 3.3e-83 312.4 205 72.2
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 3.3e-83 312.4 205 71.7
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 2.8e-82 309.3 205 71.7
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 3.6e-82 308.9 205 71.2
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 3.6e-82 308.9 206 69.9
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 3.6e-82 308.9 205 73.2
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 6.2e-82 308.1 211 68.7
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 8.1e-82 307.8 205 70.2
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 8.9e-81 304.3 208 68.8
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 8.9e-81 304.3 205 70.2
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 2.6e-80 302.8 205 68.3
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 5.8e-80 301.6 205 69.3
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 5.8e-80 301.6 205 70.2
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 1.3e-79 300.4 205 69.8
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 2.2e-79 299.7 205 69.8
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 2.9e-79 299.3 207 70.5
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 3.7e-79 298.9 205 70.2
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 6.4e-79 298.1 206 70.9
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 6.4e-79 298.1 206 69.9
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 5.4e-78 295.0 211 66.8
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 7.1e-78 294.7 206 70.4
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 1.6e-77 293.5 206 68.4
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 4.6e-77 292.0 206 69.4
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 2.3e-76 289.7 205 67.8
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 2.3e-76 289.7 206 68.4
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 3.0e-76 289.3 205 67.3
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 3.9e-76 288.9 205 66.3
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 7.3e-75 284.6 205 67.8
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 1.2e-74 283.9 205 65.4
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 8.1e-74 281.2 206 67.5
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 1.1e-73 280.8 205 64.4
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.1e-73 280.8 205 65.9
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.2e-72 277.3 199 64.3
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.2e-72 277.3 205 64.4
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 1.5e-72 276.9 205 62.4
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 1.5e-72 276.9 205 66.3
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 2.6e-72 276.2 206 65.5
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 4.4e-72 275.4 205 63.4
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 6.4e-71 271.6 206 67.0
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 4.6e-69 265.4 205 63.4
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 1.3e-68 263.8 205 61.5
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.3e-68 263.1 205 62.9
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.0e-68 262.7 208 61.1
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 3.0e-68 262.7 205 62.4
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.1e-67 260.8 205 61.5
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 1.9e-67 260.0 205 59.0
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 2.5e-67 259.6 205 61.5
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 4.3e-67 258.8 207 62.3
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.2e-66 257.3 171 70.8
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 2.1e-66 256.5 171 69.0
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 4.7e-66 255.4 205 60.5
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.1e-65 254.2 214 57.5
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 6.4e-63 245.0 172 67.4
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 3.2e-62 242.7 207 57.0
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 3.5e-61 239.2 214 55.1
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 7.8e-61 238.0 149 74.5
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.1e-57 227.6 185 61.6
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 3.1e-57 226.1 240 52.1
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 2.6e-56 223.0 237 53.2
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.7e-55 220.3 206 54.9
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 1.4e-54 217.2 156 63.5
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 4.2e-54 215.7 156 66.0
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.0e-52 211.1 157 63.1
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 3.0e-52 209.5 219 50.7
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.5e-51 207.2 214 47.7
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.3e-51 206.1 205 52.7
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 4.8e-50 202.2 155 59.4
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 2.9e-47 193.0 141 63.8
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 2.4e-46 189.9 236 42.8
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 2.4e-46 189.9 222 45.0
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 5.5e-46 188.7 155 55.5
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 5.1e-44 182.2 216 44.0
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 7.4e-43 178.3 191 51.8
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 1.6e-42 177.2 181 49.7
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 3.1e-41 172.9 114 73.7
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 4.0e-41 172.6 128 64.1
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 3.4e-32 142.9 116 56.9
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 6.3e-26 122.1 210 36.7
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 2.5e-22 110.2 184 39.1
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.6e-19 100.1 49 98.0
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.1e-17 94.7 52 82.7
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 5.0e-15 85.9 65 69.2
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 6.1e-13 79.0 49 75.5
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.8e-12 77.4 63 60.3


User provided reference genes

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