Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.2e-89 333.6 224 100.0
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 1.1e-26 124.4 250 50.0
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 1.2e-25 120.9 251 49.4
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 1.8e-24 117.1 255 48.6
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 3.0e-24 116.3 255 48.6
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 1.1e-23 114.4 256 48.4
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.3e-22 110.9 252 49.2
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 3.7e-22 109.4 251 40.6
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 1.8e-21 107.1 245 49.0
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 1.8e-21 107.1 244 48.0
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.5e-20 104.0 251 47.4
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 2.0e-20 103.6 251 47.0
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.5e-20 102.4 231 48.9
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.3e-19 100.9 232 50.9
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 6.5e-19 98.6 244 46.7
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 8.5e-19 98.2 194 54.1
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 1.1e-18 97.8 242 50.4
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.9e-18 97.1 244 45.9
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.7e-17 93.2 247 45.7
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 3.6e-17 92.8 206 54.9
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 3.6e-17 92.8 234 49.1
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 1.3e-16 90.9 179 49.2
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.8e-16 90.5 243 46.1
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 3.0e-16 89.7 238 46.6
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 3.9e-16 89.4 218 51.8
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 6.7e-16 88.6 91 53.8
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.1e-15 87.8 252 46.0
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 2.5e-15 86.7 249 47.0
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 3.3e-15 86.3 198 52.0
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 7.4e-15 85.1 247 44.5
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 9.7e-15 84.7 219 49.3
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 1.6e-14 84.0 85 55.3
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.6e-14 84.0 88 50.0
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 2.2e-14 83.6 245 32.7
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 3.7e-14 82.8 85 54.1
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 8.2e-14 81.6 228 48.7
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 8.2e-14 81.6 231 48.1
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 8.2e-14 81.6 240 45.8
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 8.2e-14 81.6 253 44.7
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 1.1e-13 81.3 231 48.1
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 1.8e-13 80.5 90 51.1
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 4.1e-13 79.3 92 50.0
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 4.1e-13 79.3 252 44.0
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 4.1e-13 79.3 246 39.0
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 5.3e-13 79.0 204 49.0
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 9.0e-13 78.2 246 43.9
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 9.0e-13 78.2 234 44.4
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.2e-12 77.8 197 50.3
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 2.0e-12 77.0 267 44.9
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 2.0e-12 77.0 221 48.0
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 2.6e-12 76.6 240 43.8
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 3.4e-12 76.3 250 43.2
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 3.4e-12 76.3 242 45.5
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 7.7e-12 75.1 232 47.8
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 1.0e-11 74.7 278 41.7
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.0e-11 74.7 247 40.1
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 1.7e-11 73.9 254 42.5
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 3.8e-11 72.8 252 32.5
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 8.5e-11 71.6 221 48.4
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 8.5e-11 71.6 257 28.4
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 8.5e-11 71.6 203 54.2
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 8.5e-11 71.6 91 48.4
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.1e-10 71.2 244 43.4
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 1.1e-10 71.2 79 49.4
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 1.4e-10 70.9 92 47.8
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 1.4e-10 70.9 80 51.2
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 1.4e-10 70.9 238 34.9
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 1.9e-10 70.5 182 51.1
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 1.9e-10 70.5 184 41.3
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 2.5e-10 70.1 78 48.7
CDE02G3511 Ceratophyllum demersum HOM05D063264 ORTHO05D004310 3.2e-10 69.7 73 52.1
Os05g0131900 Oryza sativa ssp. japonica HOM05D024805 ORTHO05D025983 9.4e-10 68.2 88 44.3
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 9.4e-10 68.2 79 46.8
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 1.2e-09 67.8 84 48.8
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 1.6e-09 67.4 82 47.6
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 1.6e-09 67.4 82 47.6
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 1.6e-09 67.4 87 47.1
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 1.6e-09 67.4 220 32.3
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 2.7e-09 66.6 246 44.7
CDE09G0065 Ceratophyllum demersum HOM05D063264 ORTHO05D004310 2.7e-09 66.6 73 49.3
Psat4g021760 Pisum sativum HOM05D007634 ORTHO05D004310 3.6e-09 66.2 184 50.0
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 3.6e-09 66.2 218 33.0
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 4.6e-09 65.9 230 43.9
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 4.6e-09 65.9 238 37.0
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 4.6e-09 65.9 277 28.9
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 6.1e-09 65.5 184 50.5
EL10Ac3g05537 Beta vulgaris HOM05D007634 ORTHO05D004310 7.9e-09 65.1 268 41.0
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 7.9e-09 65.1 247 42.9
Nn4g25534 Nelumbo nucifera HOM05D009814 ORTHO05D004310 1.0e-08 64.7 218 47.7
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 2.3e-08 63.5 190 33.7
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 2.3e-08 63.5 67 50.7
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 3.0e-08 63.2 250 41.2
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 3.0e-08 63.2 184 42.9
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 5.1e-08 62.4 87 42.5
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 5.1e-08 62.4 225 40.9
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 6.7e-08 62.0 248 43.1
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 8.8e-08 61.6 251 38.2
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 8.8e-08 61.6 239 41.4
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 8.8e-08 61.6 78 51.3
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.1e-07 61.2 246 43.1
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.5e-07 60.8 244 42.6
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 2.0e-07 60.5 246 38.2
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 2.6e-07 60.1 79 41.8
Glyma.10G011100 Glycine max HOM05D012173 ORTHO05D004310 4.4e-07 59.3 237 40.9
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 4.4e-07 59.3 69 49.3
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 4.4e-07 59.3 234 43.6
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 7.4e-07 58.5 87 41.4
Oeu038043.2 Olea europaea HOM05D016587 ORTHO05D019830 7.4e-07 58.5 81 43.2
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 9.7e-07 58.2 243 41.2
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 1.3e-06 57.8 84 44.0
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.3e-06 57.8 246 43.9
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 1.3e-06 57.8 253 39.5
Lsat_1_v5_gn_6_116040 Lactuca sativa HOM05D031577 ORTHO05D004310 1.3e-06 57.8 81 40.7
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 1.7e-06 57.4 241 41.5
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 2.2e-06 57.0 190 37.9
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 2.8e-06 56.6 68 45.6
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 3.7e-06 56.2 232 28.0
arahy.Tifrunner.gnm1.ann1.RVTS57 Arachis hypogaea HOM05D012173 ORTHO05D004310 3.7e-06 56.2 69 43.5
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 3.7e-06 56.2 53 56.6
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 3.7e-06 56.2 79 41.8
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 4.8e-06 55.8 219 30.6
Zm00001eb354820 Zea mays HOM05D024805 ORTHO05D025983 4.8e-06 55.8 53 45.3
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 8.2e-06 55.1 204 47.5
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 8.2e-06 55.1 217 46.1


User provided reference genes

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