Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034909001 Vitis vinifera HOM05D005985 ORTHO05D007403 1.0e-93 346.7 168 100.0
GSVIVG01017665001 Vitis vinifera HOM05D005985 ORTHO05D007403 8.5e-48 194.1 149 71.1
GSVIVG01017666001 Vitis vinifera HOM05D005985 ORTHO05D007403 1.8e-42 176.4 117 70.9
Peaxi162Scf00103g01922 Petunia axillaris HOM05D005985 ORTHO05D007403 1.2e-41 173.7 117 68.4
Potri.008G099900 Populus trichocarpa HOM05D005985 ORTHO05D007403 1.2e-41 173.7 118 66.9
Sopen03g026120 Solanum pennellii HOM05D005985 ORTHO05D007403 1.2e-41 173.7 117 68.4
Solyc03g096040.3 Solanum lycopersicum HOM05D005985 ORTHO05D007403 2.6e-41 172.6 117 68.4
PGSC0003DMG400027720 Solanum tuberosum HOM05D005985 ORTHO05D007403 2.6e-41 172.6 124 65.3
Nitab4.5_0000781g0010 Nicotiana tabacum HOM05D005985 ORTHO05D007403 3.5e-41 172.2 119 65.5
Manes.15G003600 Manihot esculenta HOM05D005985 ORTHO05D007403 5.9e-41 171.4 117 67.5
Nitab4.5_0000204g0010 Nicotiana tabacum HOM05D005985 ORTHO05D007403 5.9e-41 171.4 120 65.0
TPR.G31247 Trifolium pratense HOM05D005985 ORTHO05D007403 1.3e-40 170.2 116 66.4
HanXRQChr07g0194341 Helianthus annuus HOM05D005985 ORTHO05D007403 1.7e-40 169.9 118 68.6
Manes.03G210400 Manihot esculenta HOM05D005985 ORTHO05D007403 1.7e-40 169.9 117 65.8
Ca_18238_v3 Cicer arietinum L. HOM05D005985 ORTHO05D007403 2.2e-40 169.5 116 66.4
MBI18_g28902_MAGBIO Magnolia biondii HOM05D005985 ORTHO05D007403 2.2e-40 169.5 117 65.8
MD13G1144500 Malus domestica HOM05D005985 ORTHO05D007403 2.2e-40 169.5 117 65.8
Dinv29531 Davidia involucrata HOM05D005985 ORTHO05D007403 2.9e-40 169.1 117 65.8
Medtr4g094720 Medicago truncatula HOM05D005985 ORTHO05D007403 3.8e-40 168.7 116 66.4
AUR62029991 Chenopodium quinoa HOM05D005985 ORTHO05D007403 5.0e-40 168.3 117 65.8
Haze_00800 Corylus avellana HOM05D005985 ORTHO05D007403 6.5e-40 167.9 117 65.8
Lsat_1_v5_gn_6_69481 Lactuca sativa HOM05D005985 ORTHO05D007403 6.5e-40 167.9 117 69.2
MELO3C006744.2 Cucumis melo HOM05D005985 ORTHO05D007403 8.5e-40 167.5 117 65.8
ECA233G5395 Erigeron canadensis HOM05D005985 ORTHO05D007403 8.5e-40 167.5 121 66.1
Lj6A699T60 Lonicera japonica HOM05D005985 ORTHO05D007403 8.5e-40 167.5 117 66.7
TWI09G1588 Tripterygium wilfordii HOM05D005985 ORTHO05D007403 8.5e-40 167.5 117 67.5
Os07g0638300 Oryza sativa ssp. japonica HOM05D005985 ORTHO05D007403 1.1e-39 167.2 117 67.5
RcHm_v2.0_Chr4g0426681 Rosa chinensis HOM05D005985 ORTHO05D007403 1.1e-39 167.2 117 66.7
Sabra08G0075600 Salix brachista HOM05D005985 ORTHO05D007403 1.1e-39 167.2 118 65.3
SalBow8G2871 Salvia bowleyana HOM05D005985 ORTHO05D007403 1.1e-39 167.2 121 64.5
arahy.Tifrunner.gnm1.ann1.7BH383 Arachis hypogaea HOM05D005985 ORTHO05D007403 1.5e-39 166.8 117 66.7
arahy.Tifrunner.gnm1.ann1.BM2Q5K Arachis hypogaea HOM05D005985 ORTHO05D007403 1.5e-39 166.8 117 66.7
CSS0012631 Camellia sinensis var. sinensis HOM05D005985 ORTHO05D007403 1.9e-39 166.4 125 63.2
SGA_v2.0_scaffold64G22045 Striga asiatica HOM05D005985 ORTHO05D007403 2.5e-39 166.0 117 66.7
COL.COLO4_34540 Corchorus olitorius HOM05D005985 ORTHO05D007403 3.2e-39 165.6 117 66.7
Aqoxy2G02563 Aquilegia oxysepala HOM05D005985 ORTHO05D007403 4.2e-39 165.2 117 67.5
AUR62002570 Chenopodium quinoa HOM05D005985 ORTHO05D007403 4.2e-39 165.2 117 65.0
CsaV3_3G015450 Cucumis sativus L. HOM05D005985 ORTHO05D007403 4.2e-39 165.2 117 64.1
Eucgr.G02036 Eucalyptus grandis HOM05D005985 ORTHO05D007403 5.5e-39 164.9 117 64.1
ClCG05G006800 Citrullus lanatus HOM05D005985 ORTHO05D007403 7.2e-39 164.5 117 66.7
Psat7g085840 Pisum sativum HOM05D005985 ORTHO05D007403 7.2e-39 164.5 116 65.5
Nn4g25416 Nelumbo nucifera HOM05D005985 ORTHO05D007403 9.4e-39 164.1 117 65.8
QL06p013713 Quercus lobata HOM05D005985 ORTHO05D007403 9.4e-39 164.1 117 64.1
Sc24g0001290 Simmondsia chinensis HOM05D005985 ORTHO05D007403 9.4e-39 164.1 117 65.0
ATR0796G055 Amborella trichopoda HOM05D005985 ORTHO05D007403 1.2e-38 163.7 116 63.8
EL10Ac3g06274 Beta vulgaris HOM05D005985 ORTHO05D007403 1.2e-38 163.7 119 64.7
CANSAT78G1051 Cannabis sativa HOM05D005985 ORTHO05D007403 1.2e-38 163.7 118 62.7
CDE02G0842 Ceratophyllum demersum HOM05D005985 ORTHO05D007403 1.2e-38 163.7 117 64.1
PGR031G1426 Punica granatum HOM05D005985 ORTHO05D007403 1.2e-38 163.7 116 64.7
Phvul.002G189300 Phaseolus vulgaris HOM05D005985 ORTHO05D007403 1.6e-38 163.3 116 62.9
SEGI_14508 Sequoiadendron giganteum HOM05D005985 ORTHO05D007403 1.6e-38 163.3 135 57.0
Prupe.1G109000 Prunus persica HOM05D005985 ORTHO05D007403 2.1e-38 162.9 117 64.1
Cfa015714 Carpinus fangiana HOM05D005985 ORTHO05D007403 2.7e-38 162.5 118 65.3
Glyma.08G088000 Glycine max HOM05D005985 ORTHO05D007403 4.7e-38 161.8 116 62.1
TAR362G0466 Trochodendron aralioides HOM05D005985 ORTHO05D007403 4.7e-38 161.8 117 64.1
unitig_88.g27789 Utricularia gibba HOM05D000412 ORTHO05D007403 4.7e-38 161.8 120 63.3
Duzib212G0534 Durio zibethinus HOM05D005985 ORTHO05D007403 6.1e-38 161.4 117 63.2
Lj4g0025954 Lotus japonicus HOM05D005985 ORTHO05D007403 6.1e-38 161.4 116 62.1
Aa31LG10G5610 Aethionema arabicum HOM05D005985 ORTHO05D007403 8.0e-38 161.0 119 63.9
Duzib128G0500 Durio zibethinus HOM05D005985 ORTHO05D007403 8.0e-38 161.0 117 63.2
Duzib128G2054 Durio zibethinus HOM05D005985 ORTHO05D007403 8.0e-38 161.0 117 63.2
Atru.chr4.3125 Acer truncatum HOM05D005985 ORTHO05D007403 1.0e-37 160.6 117 62.4
Lalb_Chr07g0188301 Lupinus albus HOM05D005985 ORTHO05D007403 1.8e-37 159.8 116 62.9
Actinidia02521 Actinidia chinensis HOM05D005985 ORTHO05D007403 2.3e-37 159.5 122 61.5
Gorai.011G204600 Gossypium raimondii HOM05D005985 ORTHO05D007403 2.3e-37 159.5 117 64.1
THA.LOC104821806 Tarenaya hassleriana HOM05D005985 ORTHO05D007403 2.3e-37 159.5 116 64.7
HPP92_020535 Vanilla planifolia HOM05D005985 ORTHO05D007403 2.3e-37 159.5 117 63.2
Ciclev10007138m.g Citrus clementina HOM05D005985 ORTHO05D007403 3.0e-37 159.1 113 65.5
Oeu020283.1 Olea europaea HOM05D005985 ORTHO05D007403 4.0e-37 158.7 119 63.9
Nn3g21870 Nelumbo nucifera HOM05D005985 ORTHO05D007403 5.2e-37 158.3 117 62.4
PSO210G5602 Papaver somniferum HOM05D005985 ORTHO05D007403 5.2e-37 158.3 117 63.2
PSO761G0261 Papaver somniferum HOM05D005985 ORTHO05D007403 5.2e-37 158.3 117 63.2
Thecc.04G309900 Theobroma cacao HOM05D005985 ORTHO05D007403 5.2e-37 158.3 117 62.4
FvH4_4g21120 Fragaria vesca HOM05D005985 ORTHO05D007403 6.7e-37 157.9 127 59.1
Cpa.g.sc146.45 Carica papaya HOM05D005985 ORTHO05D007403 1.1e-36 157.1 129 56.6
VMungo0251G0059 Vigna mungo HOM05D005985 ORTHO05D007403 1.5e-36 156.8 116 62.1
Gohir.D10G182600 Gossypium hirsutum HOM05D005985 ORTHO05D007403 2.6e-36 156.0 117 63.2
Zm00001eb328770 Zea mays HOM05D005985 ORTHO05D007403 4.4e-36 155.2 119 59.7
Gohir.A10G176000 Gossypium hirsutum HOM05D005985 ORTHO05D007403 5.7e-36 154.8 117 61.5
A05p21210 Brassica napus HOM05D005985 ORTHO05D007403 7.5e-36 154.5 118 65.3
BraA05t21027Z Brassica rapa HOM05D005985 ORTHO05D007403 7.5e-36 154.5 118 65.3
BcaC05g27595 Brassica carinata HOM05D005985 ORTHO05D007403 9.7e-36 154.1 118 64.4
BraA05t20750Z Brassica rapa HOM05D005985 ORTHO05D007403 9.7e-36 154.1 118 64.4
FAN17G1815 Fragaria x ananassa HOM05D005985 ORTHO05D007403 9.7e-36 154.1 117 61.5
Os07g0638400 Oryza sativa ssp. japonica HOM05D005985 ORTHO05D007403 9.7e-36 154.1 118 61.0
PSO144G0010 Papaver somniferum HOM05D005985 ORTHO05D007403 9.7e-36 154.1 117 60.7
BolC6t37315H Brassica oleracea HOM05D005985 ORTHO05D007403 1.3e-35 153.7 118 63.6
AL1G54700 Arabidopsis lyrata HOM05D005985 ORTHO05D007403 2.8e-35 152.5 118 62.7
C05p35800 Brassica napus HOM05D005985 ORTHO05D007403 2.8e-35 152.5 118 63.6
Carub.0001s3723 Capsella rubella HOM05D005985 ORTHO05D007403 2.8e-35 152.5 118 62.7
DCAR_023383 Daucus carota HOM05D005985 ORTHO05D007403 2.8e-35 152.5 119 62.2
Pp3c22_8470 Physcomitrium patens HOM05D005985 ORTHO05D007403 2.8e-35 152.5 116 62.1
Migut.O00392 Erythranthe guttata HOM05D005985 ORTHO05D007403 3.7e-35 152.1 120 63.3
AT1G48130 Arabidopsis thaliana HOM05D005985 ORTHO05D007403 4.8e-35 151.8 118 61.9
Sp1g35100 Schrenkiella parvula HOM05D005985 ORTHO05D007403 4.8e-35 151.8 118 62.7
Thhalv10012121m.g Eutrema salsugineum HOM05D005985 ORTHO05D007403 8.2e-35 151.0 118 63.6
BolC5t32296H Brassica oleracea HOM05D005985 ORTHO05D007403 1.4e-34 150.2 118 63.6
BcaB02g10720 Brassica carinata HOM05D005985 ORTHO05D007403 1.8e-34 149.8 118 62.7
SMO367G0796 Selaginella moellendorffii HOM05D005985 ORTHO05D007403 3.1e-34 149.1 116 60.3
Duzib212G0439 Durio zibethinus HOM05D005985 ORTHO05D007403 1.2e-33 147.1 117 59.0
Rhsim02G0000600 Rhododendron simsii HOM05D005985 ORTHO05D007403 1.2e-33 147.1 121 58.7
AagrBONN_evm.TU.Sc2ySwM_228.1443 Anthoceros agrestis HOM05D005985 ORTHO05D007403 4.5e-33 145.2 117 59.0
Migut.G00012 Erythranthe guttata HOM05D005985 ORTHO05D007403 7.7e-33 144.4 119 60.5
Mapoly0057s0102 Marchantia polymorpha HOM05D005985 ORTHO05D007403 1.7e-32 143.3 116 60.3
CARHR037770 Cardamine hirsuta HOM05D005985 ORTHO05D007403 5.0e-32 141.7 118 59.3
CBR_g8949 Chara braunii HOM05D005985 ORTHO05D007403 1.5e-31 140.2 116 60.3
Glyma.05G133466 Glycine max HOM05D005985 ORTHO05D007403 1.2e-30 137.1 97 61.9
AagrBONN_evm.TU.Sc2ySwM_344.4472 Anthoceros agrestis HOM05D005985 ORTHO05D007403 2.7e-30 136.0 142 45.1
Mapoly0042s0090 Marchantia polymorpha HOM05D005985 ORTHO05D007403 1.8e-29 133.3 117 50.4
Pp3c10_21340 Physcomitrium patens HOM05D005985 ORTHO05D007403 2.3e-29 132.9 117 51.3
AagrBONN_evm.TU.Sc2ySwM_117.1081 Anthoceros agrestis HOM05D005985 ORTHO05D007403 2.0e-28 129.8 117 50.4
Pp3c20_21100 Physcomitrium patens HOM05D005985 ORTHO05D007403 2.0e-28 129.8 117 49.6
SMO147G0228 Selaginella moellendorffii HOM05D005985 ORTHO05D007403 1.3e-27 127.1 117 48.7
SEGI_03003 Sequoiadendron giganteum HOM05D005985 ORTHO05D007403 1.8e-26 123.2 117 47.9
AagrBONN_evm.TU.Sc2ySwM_228.1273 Anthoceros agrestis HOM05D005985 ORTHO05D007403 1.2e-25 120.6 116 48.3
CAN.G546.41 Capsicum annuum HOM05D005985 ORTHO05D007403 8.5e-24 114.4 117 51.3
Cfa026758 Carpinus fangiana HOM05D005985 ORTHO05D007403 1.0e-21 107.5 110 43.6
PRCOL_00004927 Prasinoderma coloniale HOM05D005985 ORTHO05D007403 1.0e-21 107.5 118 44.1
MD16G1139600 Malus domestica HOM05D005985 ORTHO05D007403 3.1e-18 95.9 71 62.0
Cc03_g00310 Coffea canephora HOM05D005985 ORTHO05D007403 6.1e-14 81.6 58 67.2
Haze_27189 Corylus avellana HOM05D005985 ORTHO05D007403 1.0e-13 80.9 116 37.1
Lalb_Chr13g0293501 Lupinus albus HOM05D005985 ORTHO05D007403 7.3e-07 58.2 45 51.1


User provided reference genes

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