Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 2.2e-151 538.9 263 100.0
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 1.2e-109 400.2 267 74.5
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 1.1e-105 387.1 254 75.2
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 9.1e-105 384.0 263 72.2
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 4.5e-104 381.7 267 71.9
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 5.9e-104 381.3 262 71.8
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 2.5e-102 375.9 264 69.7
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 4.2e-102 375.2 258 70.2
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 2.7e-101 372.5 263 70.3
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 3.6e-101 372.1 264 69.3
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 7.9e-101 370.9 267 71.2
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.1e-99 367.1 263 71.9
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 3.3e-99 365.5 263 65.8
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 4.4e-99 365.2 267 69.3
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 5.7e-99 364.8 258 69.0
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 2.8e-98 362.5 267 67.8
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 2.8e-98 362.5 281 66.5
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 3.7e-98 362.1 267 67.0
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 3.1e-97 359.0 263 65.4
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 3.1e-97 359.0 263 66.2
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 3.4e-96 355.5 268 67.9
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 5.9e-96 354.8 257 68.5
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 7.7e-96 354.4 265 68.3
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 1.4e-94 350.1 264 65.2
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 1.4e-94 350.1 266 66.2
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 1.9e-94 349.7 268 66.4
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 1.9e-94 349.7 269 65.8
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 2.5e-94 349.4 267 68.2
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 7.2e-94 347.8 269 67.7
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 7.2e-94 347.8 269 67.7
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 9.4e-94 347.4 265 66.4
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 3.0e-92 342.4 263 65.0
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 3.3e-91 339.0 222 74.8
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 3.7e-90 335.5 263 64.3
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 6.3e-90 334.7 267 63.3
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 8.2e-90 334.3 261 65.9
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 2.4e-89 332.8 269 63.9
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 4.1e-89 332.0 267 62.9
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 1.3e-87 327.0 274 62.8
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 2.2e-87 326.2 274 61.3
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 2.9e-87 325.9 260 64.2
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 7.2e-86 321.2 259 61.4
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 6.1e-85 318.2 270 64.1
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 8.0e-85 317.8 263 61.6
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 1.0e-84 317.4 236 66.1
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.2e-83 313.9 257 62.3
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 1.5e-83 313.5 261 62.8
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 2.0e-83 313.2 258 63.6
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 7.5e-83 311.2 263 60.8
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 1.7e-82 310.1 261 63.2
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 2.8e-82 309.3 267 60.3
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 3.7e-82 308.9 259 61.4
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 3.7e-82 308.9 257 62.3
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 8.2e-82 307.8 261 61.3
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 2.4e-81 306.2 253 62.1
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 2.4e-81 306.2 261 61.3
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 4.1e-81 305.4 257 61.9
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 7.0e-81 304.7 257 61.5
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 2.7e-80 302.8 258 62.4
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.5e-80 302.4 263 59.3
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 1.3e-79 300.4 259 58.7
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 6.5e-79 298.1 257 60.7
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 2.5e-78 296.2 191 72.8
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 3.2e-78 295.8 191 77.5
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 9.4e-78 294.3 208 71.6
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 1.2e-77 293.9 267 59.2
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 4.7e-77 292.0 194 75.8
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.8e-76 290.0 302 53.3
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 2.3e-76 289.7 261 58.6
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 5.2e-76 288.5 278 56.1
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 1.2e-75 287.3 261 57.9
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 2.0e-75 286.6 231 64.1
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 2.6e-75 286.2 205 68.3
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 4.4e-75 285.4 187 72.7
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 1.4e-73 280.4 280 56.1
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 1.6e-72 276.9 276 55.4
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 2.7e-72 276.2 217 65.4
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 1.7e-71 273.5 258 55.4
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 5.5e-70 268.5 261 55.2
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 1.6e-69 266.9 265 53.6
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.0e-67 260.0 198 66.7
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 9.8e-67 257.7 192 67.2
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 4.1e-65 252.3 264 49.2
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 9.2e-65 251.1 278 50.0
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 1.2e-64 250.8 267 52.4
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 7.3e-62 241.5 259 54.4
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 2.3e-60 236.5 267 51.3
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 6.8e-60 235.0 190 63.7
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 7.5e-59 231.5 281 49.5
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 1.3e-58 230.7 262 46.6
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 1.3e-58 230.7 323 45.2
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 4.6e-56 222.2 191 60.2
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 1.3e-55 220.7 262 47.3
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.1e-54 217.6 135 73.3
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.5e-54 217.2 205 59.0
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 2.1e-53 213.4 200 56.0
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 1.4e-52 210.7 259 45.2
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 1.7e-47 193.7 156 62.8
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 1.4e-44 184.1 179 55.9
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 8.9e-44 181.4 161 59.6
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 7.1e-41 171.8 136 64.7
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 3.5e-40 169.5 267 42.3
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 9.5e-38 161.4 131 65.6
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 1.6e-37 160.6 161 54.7
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 5.8e-35 152.1 156 55.1
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 6.4e-34 148.7 168 56.0
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 9.6e-30 134.8 253 36.8
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 3.1e-28 129.8 105 54.3
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 5.1e-23 112.5 70 74.3
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 1.9e-22 110.5 178 36.5
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 3.6e-21 106.3 72 73.6
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 4.2e-17 92.8 137 38.0
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 1.2e-16 91.3 196 34.2
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 3.9e-15 86.3 175 34.3
BcaC07g37753 Brassica carinata HOM05D007105 ORTHO05D009304 1.3e-07 61.2 209 27.3
BolC8t48138H Brassica oleracea HOM05D007105 ORTHO05D009304 1.3e-07 61.2 209 27.3
CBR_g45547 Chara braunii HOM05D003201 ORTHO05D008805 3.9e-07 59.7 273 25.3
A08p10520 Brassica napus HOM05D007105 ORTHO05D006179 5.1e-07 59.3 203 28.1
BraA08t33052Z Brassica rapa HOM05D007105 ORTHO05D009304 5.1e-07 59.3 203 28.1


User provided reference genes

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