Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 7.4e-35 149.8 68 100.0
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 4.7e-21 104.0 68 64.7
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 4.7e-21 104.0 68 69.1
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 3.0e-20 101.3 68 69.1
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 5.2e-20 100.5 63 69.8
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 6.8e-20 100.1 55 70.9
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 1.2e-19 99.4 68 66.2
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 4.4e-19 97.4 68 63.2
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 7.5e-19 96.7 63 60.3
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 9.7e-19 96.3 59 66.1
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.3e-18 95.9 67 61.2
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 1.7e-18 95.5 68 61.8
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 2.8e-18 94.7 68 58.8
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 3.7e-18 94.4 68 63.2
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 4.8e-18 94.0 55 60.0
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.8e-18 94.0 67 58.2
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 6.3e-18 93.6 55 72.7
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 8.3e-18 93.2 63 66.7
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 1.8e-17 92.0 62 62.9
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.8e-17 92.0 43 79.1
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 3.1e-17 91.3 51 70.6
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 3.1e-17 91.3 51 70.6
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 3.1e-17 91.3 51 70.6
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 5.3e-17 90.5 53 64.2
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 7.0e-17 90.1 56 66.1
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 7.0e-17 90.1 46 73.9
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 7.0e-17 90.1 67 56.7
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 9.1e-17 89.7 66 59.1
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 1.2e-16 89.4 57 59.6
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 1.2e-16 89.4 57 59.6
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.2e-16 89.4 65 58.5
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 2.7e-16 88.2 48 68.8
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 3.5e-16 87.8 58 62.1
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 5.9e-16 87.0 43 72.1
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 1.7e-15 85.5 45 73.3
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.2e-15 85.1 58 58.6
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 2.9e-15 84.7 51 56.9
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 5.0e-15 84.0 63 55.6
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 5.0e-15 84.0 68 48.5
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 6.5e-15 83.6 66 54.5
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 1.1e-14 82.8 63 54.0
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 1.5e-14 82.4 64 48.4
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 1.9e-14 82.0 63 46.0
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 2.5e-14 81.6 66 45.5
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.5e-14 81.6 58 58.6
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 5.5e-14 80.5 56 57.1
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 7.2e-14 80.1 57 52.6
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 9.4e-14 79.7 59 45.8
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 1.2e-13 79.3 69 46.4
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 1.2e-13 79.3 43 67.4
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 1.2e-13 79.3 66 45.5
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 1.2e-13 79.3 53 50.9
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 2.7e-13 78.2 52 51.9
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 2.7e-13 78.2 60 50.0
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 4.7e-13 77.4 58 50.0
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 4.7e-13 77.4 67 47.8
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 4.7e-13 77.4 63 46.0
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 6.1e-13 77.0 66 48.5
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 8.0e-13 76.6 58 44.8
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 1.4e-12 75.9 57 43.9
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 1.4e-12 75.9 69 43.5
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 1.8e-12 75.5 65 50.8
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 1.8e-12 75.5 65 50.8
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.8e-12 75.5 52 50.0
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.8e-12 75.5 52 50.0
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 1.8e-12 75.5 52 50.0
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 1.8e-12 75.5 62 46.8
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 2.3e-12 75.1 43 55.8
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 2.3e-12 75.1 58 50.0
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 2.3e-12 75.1 66 42.4
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 3.0e-12 74.7 42 61.9
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 3.0e-12 74.7 66 40.9
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 4.0e-12 74.3 54 44.4
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 4.0e-12 74.3 57 42.1
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 5.2e-12 73.9 66 39.4
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 6.8e-12 73.6 65 40.0
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 6.8e-12 73.6 53 47.2
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 6.8e-12 73.6 60 41.7
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 8.8e-12 73.2 59 47.5
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 1.2e-11 72.8 68 44.1
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 1.5e-11 72.4 43 55.8
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 1.5e-11 72.4 66 45.5
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 2.0e-11 72.0 62 43.5
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 2.0e-11 72.0 53 52.8
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 2.6e-11 71.6 67 43.3
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 3.4e-11 71.2 62 45.2
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 4.4e-11 70.9 43 53.5
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 5.7e-11 70.5 66 39.4
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 7.5e-11 70.1 43 53.5
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 9.8e-11 69.7 57 45.6
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 1.7e-10 68.9 54 48.1
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.8e-09 65.5 45 57.8
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.8e-09 65.5 47 55.3
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 7.0e-09 63.5 44 56.8
Nn5g28989 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.3e-07 59.3 32 65.6


User provided reference genes

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