Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034708001 Vitis vinifera HOM05D007680 ORTHO05D009702 2.4e-102 375.6 194 100.0
TAR636G0370 Trochodendron aralioides HOM05D007680 ORTHO05D009702 4.6e-29 132.1 159 58.5
Nn2g14013 Nelumbo nucifera HOM05D007680 ORTHO05D009702 3.6e-26 122.5 147 57.1
Hma1.2p1_0026F.1_g016760 Hydrangea macrophylla HOM05D007680 ORTHO05D009702 6.2e-26 121.7 165 49.7
MELO3C012366.2 Cucumis melo HOM05D007680 ORTHO05D009702 3.1e-25 119.4 171 47.4
ClCG05G021580 Citrullus lanatus HOM05D007680 ORTHO05D009702 4.0e-25 119.0 97 71.1
TAR636G3254 Trochodendron aralioides HOM05D007680 ORTHO05D009702 8.9e-25 117.9 103 68.9
CsaV3_5G035650 Cucumis sativus L. HOM05D007680 ORTHO05D009702 1.2e-24 117.5 97 70.1
Dinv30655 Davidia involucrata HOM05D007680 ORTHO05D009702 1.2e-24 117.5 146 52.1
QL04p041248 Quercus lobata HOM05D007680 ORTHO05D009702 2.0e-24 116.7 170 50.0
ATR0820G188 Amborella trichopoda HOM05D007680 ORTHO05D009702 2.6e-24 116.3 102 66.7
Haze_02610 Corylus avellana HOM05D007680 ORTHO05D009702 4.4e-24 115.5 169 49.1
Sed0005690 Sechium edule HOM05D007680 ORTHO05D009702 5.8e-24 115.2 93 68.8
Aqoxy2G01382 Aquilegia oxysepala HOM05D007680 ORTHO05D009702 1.3e-23 114.0 152 49.3
Cfa011226 Carpinus fangiana HOM05D007680 ORTHO05D009702 2.9e-23 112.8 165 50.3
CDE02G0611 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 3.8e-23 112.5 105 61.9
CiPaw.14G028600 Carya illinoinensis HOM05D007680 ORTHO05D009702 4.9e-23 112.1 164 47.6
CDE08G1572 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 8.4e-23 111.3 92 66.3
Phvul.007G245300 Phaseolus vulgaris HOM05D007680 ORTHO05D009702 1.9e-22 110.2 154 49.4
TAR636G2061 Trochodendron aralioides HOM05D007680 ORTHO05D009702 7.1e-22 108.2 78 76.9
vmacro10277 Vaccinium macrocarpon HOM05D007680 ORTHO05D009702 7.1e-22 108.2 165 47.3
PSO384G1244 Papaver somniferum HOM05D007680 ORTHO05D009702 9.2e-22 107.8 142 51.4
SalBow6G1777 Salvia bowleyana HOM05D007680 ORTHO05D009702 9.2e-22 107.8 145 47.6
MBI17_g11658_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 2.7e-21 106.3 101 63.4
FAN03G2755 Fragaria x ananassa HOM05D007680 ORTHO05D009702 3.5e-21 105.9 148 50.7
Duzib128G1419 Durio zibethinus HOM05D007680 ORTHO05D009702 4.6e-21 105.5 167 46.7
Atru.chr12.970 Acer truncatum HOM05D007680 ORTHO05D009702 6.0e-21 105.1 84 65.5
Manes.05G202400 Manihot esculenta HOM05D007680 ORTHO05D009702 6.0e-21 105.1 110 59.1
Thecc.10G109800 Theobroma cacao HOM05D007680 ORTHO05D009702 7.8e-21 104.8 163 47.2
Thecc.K0008600 Theobroma cacao HOM05D007680 ORTHO05D009702 7.8e-21 104.8 163 47.2
Prupe.2G086600 Prunus persica HOM05D007680 ORTHO05D009702 1.7e-20 103.6 159 49.1
Potri.008G025700 Populus trichocarpa HOM05D007680 ORTHO05D009702 3.0e-20 102.8 162 49.4
Ciclev10032885m.g Citrus clementina HOM05D007680 ORTHO05D009702 5.1e-20 102.1 80 70.0
FAN06G0858 Fragaria x ananassa HOM05D007680 ORTHO05D009702 8.6e-20 101.3 148 48.6
Lalb_Chr01g0010321 Lupinus albus HOM05D007680 ORTHO05D009702 1.1e-19 100.9 72 76.4
Gohir.A05G288200 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.5e-19 100.5 166 47.0
Thhalv10026523m.g Eutrema salsugineum HOM05D007680 ORTHO05D009702 1.9e-19 100.1 136 51.5
Glyma.02G165700 Glycine max HOM05D007680 ORTHO05D009702 2.5e-19 99.8 75 70.7
CSS0013494 Camellia sinensis var. sinensis HOM05D007680 ORTHO05D009702 4.3e-19 99.0 89 65.2
Gohir.D05G289400 Gossypium hirsutum HOM05D007680 ORTHO05D009702 4.3e-19 99.0 168 46.4
Actinidia31090 Actinidia chinensis HOM05D007680 ORTHO05D009702 7.3e-19 98.2 104 57.7
Gorai.009G304500 Gossypium raimondii HOM05D007680 ORTHO05D009702 7.3e-19 98.2 168 46.4
Sp7g35810 Schrenkiella parvula HOM05D007680 ORTHO05D009702 1.2e-18 97.4 119 54.6
Medtr1g050700 Medicago truncatula HOM05D007680 ORTHO05D009702 1.6e-18 97.1 108 58.3
Potri.010G234900 Populus trichocarpa HOM05D007680 ORTHO05D009702 1.6e-18 97.1 77 72.7
PGR044G0006 Punica granatum HOM05D007680 ORTHO05D009702 1.6e-18 97.1 164 46.3
THA.LOC104824894 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 2.1e-18 96.7 146 48.6
THA.LOC104824900 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 2.1e-18 96.7 146 48.6
Cpa.g.sc128.47 Carica papaya HOM05D007680 ORTHO05D009702 2.8e-18 96.3 173 44.5
TWI38G2267 Tripterygium wilfordii HOM05D007680 ORTHO05D009702 2.8e-18 96.3 76 72.4
PGSC0003DMG400027341 Solanum tuberosum HOM05D007680 ORTHO05D009702 3.6e-18 95.9 109 56.9
VMungo0720G1600 Vigna mungo HOM05D007680 ORTHO05D009702 4.7e-18 95.5 101 57.4
arahy.Tifrunner.gnm1.ann1.VK4BH4 Arachis hypogaea HOM05D007680 ORTHO05D009702 6.2e-18 95.1 75 65.3
HanXRQChr08g0217901 Helianthus annuus HOM05D007680 ORTHO05D009702 6.2e-18 95.1 158 45.6
Ah.10g034230 Amaranthus hybridus HOM05D007680 ORTHO05D009702 8.1e-18 94.7 151 43.7
RcHm_v2.0_Chr1g0333251 Rosa chinensis HOM05D007680 ORTHO05D009702 8.1e-18 94.7 74 71.6
Sopen11g003400 Solanum pennellii HOM05D007680 ORTHO05D009702 8.1e-18 94.7 142 46.5
EL10Ac2g03857 Beta vulgaris HOM05D007680 ORTHO05D009702 1.8e-17 93.6 108 52.8
MD07G1087200 Malus domestica HOM05D007680 ORTHO05D009702 1.8e-17 93.6 165 44.8
CARHR246610 Cardamine hirsuta HOM05D007680 ORTHO05D009702 2.4e-17 93.2 130 50.0
Oeu060261.1 Olea europaea HOM05D007680 ORTHO05D009702 2.4e-17 93.2 161 45.3
Lj2C27T21 Lonicera japonica HOM05D007680 ORTHO05D009702 5.2e-17 92.0 69 73.9
COL.COLO4_33896 Corchorus olitorius HOM05D007680 ORTHO05D009702 6.9e-17 91.7 159 42.8
Sc20g0001300 Simmondsia chinensis HOM05D007680 ORTHO05D009702 8.9e-17 91.3 67 71.6
AT4G40045 Arabidopsis thaliana HOM05D007680 ORTHO05D009702 1.2e-16 90.9 136 45.6
Psat6g094320 Pisum sativum HOM05D007680 ORTHO05D009702 1.2e-16 90.9 73 68.5
Lalb_Chr19g0129271 Lupinus albus HOM05D007680 ORTHO05D009702 2.0e-16 90.1 158 44.3
TPR.G305 Trifolium pratense HOM05D007680 ORTHO05D009702 2.0e-16 90.1 64 78.1
TPR.G7612 Trifolium pratense HOM05D007680 ORTHO05D009702 2.0e-16 90.1 64 78.1
AL7G12370 Arabidopsis lyrata HOM05D007680 ORTHO05D009702 2.6e-16 89.7 77 67.5
Migut.F01656 Erythranthe guttata HOM05D007680 ORTHO05D009702 2.6e-16 89.7 137 46.7
Carub.0007s0203 Capsella rubella HOM05D007680 ORTHO05D009702 4.4e-16 89.0 136 47.8
A01p00970 Brassica napus HOM05D007680 ORTHO05D009702 1.7e-15 87.0 134 49.3
BraA01t00095Z Brassica rapa HOM05D007680 ORTHO05D009702 1.7e-15 87.0 134 49.3
SEGI_03872 Sequoiadendron giganteum HOM05D007680 ORTHO05D009702 2.2e-15 86.7 95 55.8
C01p01090 Brassica napus HOM05D007680 ORTHO05D009702 1.0e-12 77.8 130 47.7
Lsat_1_v5_gn_2_102521 Lactuca sativa HOM05D007680 ORTHO05D009702 1.3e-12 77.4 101 45.5
Lj6g0009049 Lotus japonicus HOM05D007680 ORTHO05D009702 3.9e-12 75.9 121 42.1
Sabra10G0182100 Salix brachista HOM05D007680 ORTHO05D009702 3.9e-12 75.9 61 62.3
BolC1t00107H Brassica oleracea HOM05D007680 ORTHO05D009702 8.7e-12 74.7 130 46.2
unitig_899.g15034 Utricularia gibba HOM05D007680 ORTHO05D009702 8.7e-12 74.7 99 52.5
Hund17353 Selenicereus undatus HOM05D007680 ORTHO05D009702 1.5e-11 73.9 70 55.7
arahy.Tifrunner.gnm1.ann1.UIS3VC Arachis hypogaea HOM05D007680 ORTHO05D009702 1.9e-11 73.6 99 49.5
AUR62043943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.3e-11 72.4 106 41.5
Glyma.10G104651 Glycine max HOM05D007680 ORTHO05D009702 4.3e-11 72.4 72 54.2
Os12g0206700 Oryza sativa ssp. japonica HOM05D007680 ORTHO05D009702 2.0e-08 63.5 94 45.7
MD07G1069500 Malus domestica HOM05D007680 ORTHO05D009702 3.4e-08 62.8 124 38.7
Zm00001eb411120 Zea mays HOM05D007680 ORTHO05D009702 7.6e-08 61.6 112 40.2
SGA_v2.0_scaffold10G05320 Striga asiatica HOM05D007680 ORTHO05D009702 1.7e-07 60.5 112 42.0
Zm00001eb004510 Zea mays HOM05D007680 ORTHO05D009702 1.1e-06 57.8 142 33.8
MBI17_g15050_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 5.4e-06 55.5 110 35.5


User provided reference genes

Program Settings