Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 3.6e-67 258.1 126 100.0
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 2.9e-24 115.5 127 48.8
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 1.2e-22 110.2 128 46.1
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 3.0e-21 105.5 137 47.4
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 6.6e-21 104.4 119 50.4
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 1.1e-20 103.6 120 46.7
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 2.1e-19 99.4 122 46.7
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 2.8e-19 99.0 101 51.5
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 8.1e-19 97.4 111 46.8
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 5.3e-18 94.7 111 45.0
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 2.0e-17 92.8 119 47.1
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 3.4e-17 92.0 121 43.8
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 9.9e-17 90.5 119 42.0
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 1.3e-16 90.1 132 43.2
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.9e-16 89.0 118 47.5
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 3.8e-16 88.6 117 37.6
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 3.8e-16 88.6 111 47.7
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 6.4e-16 87.8 130 38.5
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.4e-15 86.7 118 40.7
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 2.4e-15 85.9 122 40.2
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 4.2e-15 85.1 128 42.2
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 4.2e-15 85.1 125 43.2
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 5.4e-15 84.7 128 42.2
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 5.4e-15 84.7 114 42.1
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 7.1e-15 84.3 119 38.7
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 7.1e-15 84.3 118 40.7
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 9.3e-15 84.0 113 42.5
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 1.6e-14 83.2 131 35.9
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 1.6e-14 83.2 74 51.4
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 2.7e-14 82.4 119 39.5
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 2.7e-14 82.4 68 58.8
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 3.5e-14 82.0 118 44.1
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 4.6e-14 81.6 78 50.0
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 4.6e-14 81.6 108 43.5
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 4.6e-14 81.6 124 38.7
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 6.0e-14 81.3 128 37.5
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 7.9e-14 80.9 102 41.2
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 7.9e-14 80.9 74 50.0
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 7.9e-14 80.9 74 50.0
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 7.9e-14 80.9 125 38.4
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.7e-13 79.7 120 35.0
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.7e-13 79.7 120 35.0
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.7e-13 79.7 128 41.4
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.3e-13 79.3 120 35.0
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.3e-13 79.3 120 35.0
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 2.3e-13 79.3 117 40.2
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 2.3e-13 79.3 83 45.8
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 3.0e-13 79.0 120 40.8
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 3.0e-13 79.0 126 39.7
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 3.9e-13 78.6 81 46.9
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 3.9e-13 78.6 114 40.4
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 3.9e-13 78.6 117 37.6
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 8.7e-13 77.4 128 39.8
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 1.1e-12 77.0 132 33.3
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 1.1e-12 77.0 111 38.7
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 1.1e-12 77.0 78 44.9
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 1.5e-12 76.6 109 44.0
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.9e-12 76.3 111 38.7
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 1.9e-12 76.3 133 36.1
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 2.5e-12 75.9 108 45.4
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 2.5e-12 75.9 121 37.2
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 3.3e-12 75.5 116 37.9
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 3.3e-12 75.5 111 38.7
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 4.3e-12 75.1 109 41.3
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 5.6e-12 74.7 115 37.4
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 5.6e-12 74.7 117 34.2
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 7.4e-12 74.3 116 37.9
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 9.6e-12 73.9 80 47.5
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 9.6e-12 73.9 118 41.5
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 9.6e-12 73.9 118 41.5
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 1.6e-11 73.2 118 41.5
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 1.6e-11 73.2 72 51.4
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 2.8e-11 72.4 95 45.3
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 4.8e-11 71.6 65 43.1
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 8.1e-11 70.9 121 38.8
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 8.1e-11 70.9 125 34.4
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 1.1e-10 70.5 122 36.1
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 1.4e-10 70.1 95 44.2
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 3.1e-10 68.9 93 44.1
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 4.0e-10 68.6 122 34.4
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 4.0e-10 68.6 148 35.1
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 6.9e-10 67.8 90 43.3
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 9.0e-10 67.4 118 28.8
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 1.2e-09 67.0 111 42.3
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 1.5e-09 66.6 110 40.9
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.5e-09 66.6 50 60.0
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 2.6e-09 65.9 129 34.1
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 3.4e-09 65.5 116 32.8
QL08p037183 Quercus lobata HOM05D018442 ORTHO05D020347 1.3e-08 63.5 92 41.3
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 1.7e-08 63.2 42 69.0
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 1.7e-08 63.2 120 34.2
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 1.7e-08 63.2 72 43.1
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 2.2e-08 62.8 100 39.0
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 2.2e-08 62.8 96 41.7
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 3.8e-08 62.0 46 58.7
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 6.4e-08 61.2 42 54.8
MELO3C012374.2 Cucumis melo HOM05D027254 ORTHO05D028888 8.4e-08 60.8 92 35.9
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 1.1e-07 60.5 117 31.6
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 1.9e-07 59.7 92 42.4
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 1.9e-07 59.7 127 29.1
Thecc.10G097400 Theobroma cacao HOM05D018442 ORTHO05D020347 2.4e-07 59.3 89 40.4
CsaV3_5G035720 Cucumis sativus L. HOM05D027254 ORTHO05D028888 7.1e-07 57.8 92 31.5
EL10Ac4g08229 Beta vulgaris HOM05D034697 ORTHO05D008874 1.2e-06 57.0 128 36.7
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 2.1e-06 56.2 120 32.5
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 2.1e-06 56.2 73 39.7
COL.COLO4_34173 Corchorus olitorius HOM05D018442 ORTHO05D020347 6.0e-06 54.7 89 39.3
Zm00001eb139960 Zea mays HOM05D068021 ORTHO05D008874 6.0e-06 54.7 88 35.2


User provided reference genes

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