Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034561001 Vitis vinifera HOM05D006494 ORTHO05D007787 9.5e-104 380.2 192 100.0
GSVIVG01034560001 Vitis vinifera HOM05D006494 ORTHO05D007787 1.2e-29 134.0 76 88.2
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 5.7e-24 115.2 269 34.9
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 5.7e-16 88.6 124 46.8
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.7e-15 87.0 187 36.9
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.9e-15 85.5 263 32.7
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 6.3e-15 85.1 193 35.8
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.8e-14 83.6 180 35.6
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.1e-14 82.4 136 41.2
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.0e-13 80.1 174 38.5
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 7.8e-13 78.2 194 34.5
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 2.9e-12 76.3 97 40.2
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 5.0e-12 75.5 124 41.1
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 8.6e-12 74.7 187 35.3
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 1.9e-11 73.6 142 37.3
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 3.3e-11 72.8 151 35.1
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 4.3e-11 72.4 95 45.3
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.3e-11 71.6 95 44.2
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 9.5e-11 71.2 140 38.6
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 9.5e-11 71.2 98 45.9
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.1e-10 70.1 102 45.1
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 6.1e-10 68.6 191 30.9
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 8.0e-10 68.2 228 30.3
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.0e-09 67.8 125 36.8
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.0e-09 67.8 146 36.3
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.4e-09 67.4 125 36.0
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.8e-09 67.0 120 35.8
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.8e-09 67.0 142 36.6
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 1.8e-09 67.0 192 30.2
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 2.3e-09 66.6 70 48.6
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.1e-09 66.2 125 36.0
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 8.9e-09 64.7 262 28.2
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 8.9e-09 64.7 99 41.4
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.2e-08 64.3 78 44.9
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 2.0e-08 63.5 229 30.1
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 2.6e-08 63.2 229 29.7
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 2.6e-08 63.2 80 42.5
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 2.6e-08 63.2 241 30.3
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 5.8e-08 62.0 98 39.8
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 7.5e-08 61.6 121 37.2
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.3e-07 60.8 278 28.1
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 1.3e-07 60.8 129 34.9
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 1.3e-07 60.8 102 44.1
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.9e-07 59.7 120 31.7
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 3.7e-07 59.3 183 31.1
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 4.9e-07 58.9 205 30.2
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 4.9e-07 58.9 117 31.6
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 6.4e-07 58.5 101 43.6
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 8.3e-07 58.2 117 31.6
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.1e-06 57.8 129 36.4
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.4e-06 57.4 259 28.6
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 2.4e-06 56.6 69 46.4
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.4e-06 56.6 69 47.8
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.2e-06 56.2 161 32.9
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 5.4e-06 55.5 151 32.5
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 5.4e-06 55.5 136 38.2


User provided reference genes

Program Settings